Octopus bimaculoides (California two-spot octopus): 106881150
Help
Entry
106881150 CDS
T04127
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106881150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106881150
Spliceosome [BR:
obi03041
]
Complex A
U1 snRNP components
U1 related factors
106881150
Complex B
106881150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
106881150
NCBI-ProteinID:
XP_014786924
LinkDB
All DBs
Position
1:complement(124082063..124205228)
Genome browser
AA seq
913 aa
AA seq
DB search
MAGTNPTSQPQANPLMRTPFGIGPVPPGPAPPGFIPTMVAGGPGPSPDMIKPPPVMPPGI
PPAYTPVPPFVPPRSSSGAVPTRPGVPPRPGIPPPGLPIPPPGFPPTTGMLGTPVSLPGA
LPGSVGQTQTTQQPSSIAASSTTSIECKPAEKKTVWTEHKAPDGRTYYYNSVTKQSSWEK
PDELKTPAELLLSQCPWKEYKSDTGKVYYHNSASKESRWTKPKELEELEAMIVKQELDKK
PVGELGVSLSPNVTSGVPVVSSSQSSASVVQAPVLVGSTSSATSQVHNTGPPSAIQQAIQ
ATLASIELPPQPSVVLQQQVQQHQQSATQQAQSAVSSSSTVTSAGSVTPVAQKQTPTQVV
IDGNKTDSSSNSSSEGEDDEKNERKEYIFRNKKEAIEAFKTLLRERDVPSSATWEQAMKM
IINDSRYGALKHLNEKKQAFNEYKTQKAKEEKEEQRLRTKQAKEDLENFLLNSDKMNSTV
KYWKADNIFGDLDVWKNVCDRDRRELFEDVLHMLAKREKEEAKALRKRNIKVFSEILDSM
PSLTYCTTWSDAQQMLLDNPRFTEDPDLQNMDKEDALICFEDHIRMLEQEYDDEKERERR
RVRRQQRKNRESFQVLLDELHDQGKLNSMSLWMDLYPIVSQDLRFSNILGQPGSTPLDLF
KFYVEDLKSRFHDEKKIVKEILKDRGIIVETSTTYEDFSSCLNTDKRSGNLDSGNIKLTY
NSLIEKAEAREKERLKEEARKIRRLEGAFKAMLKQASPSIDSMTRWEDIRVRLEKEIPFE
AITLESERIRLYKEYQVAVLEQCSHHHSKKKKSKKHKLKRSRSRSRSSESDDDISSRHKL
KKKKKSRSASRSPSYMSESDDQEMERASKRHKKKSKKKKHLSRADWNSSDSDVSEGELEK
RRRHLLQQLEADQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtacgaatccaacttcacaacctcaggctaatccattaatgcgaacaccgttt
gggattgggcctgtgcctccaggaccagcaccacctggttttatacctacaatggttgca
ggtggtccaggaccaagtccagatatgatcaaacctcctccagttatgccacctggaata
ccaccagcttatacacctgtaccaccttttgttcctccccgttctagttctggagctgta
ccaacacgacctggggtaccaccacgccctggaataccacctcctggattacctatccca
cctccgggctttccacccacaacaggtatgttaggtactcctgtctctcttcctggtgct
ttacctgggtctgttggtcagacacaaaccacccagcaaccatcttccattgcagcttcc
tcaaccacttctatagagtgtaaacctgctgaaaagaaaactgtttggactgaacacaaa
gctcctgatggtagaacatactattataacagtgtaacaaaacagtccagctgggaaaaa
ccagatgaattgaaaactcctgctgaactattgttaagtcaatgtccatggaaagaatac
aaatctgacacaggaaaggtttactatcacaattctgcctccaaagaatctcgctggacc
aaaccaaaggaattagaggaacttgaagctatgatagtcaagcaagaattagataagaaa
ccagttggagagcttggtgtcagcttgagtcctaatgtcaccagtggtgttccagttgta
tcatcatctcagtcgtcggcttcagttgttcaggctcctgttttggtaggatctacaagt
agtgctacttctcaagttcataatacaggccctccgtctgcaattcaacaagctattcaa
gcaacattggcttctattgaacttcctccacaaccatctgttgtccttcagcaacaagtc
caacaacatcaacagtctgccacacagcaagcacagtcagctgtaagtagttcatcaaca
gttacatctgcaggatctgtcactcctgttgcacagaagcaaactccaactcaagttgtt
atcgatggcaataagacagactcatcatcaaacagcagcagcgaaggtgaagatgatgag
aaaaatgagagaaaagaatatattttccggaacaaaaaagaagctattgaagcatttaaa
actctcctacgagaaagggatgtgccgtcttctgctacatgggagcaagctatgaaaatg
atcattaatgattcaagatatggagcattaaaacacttgaatgagaagaaacaagctttt
aatgaatacaaaactcaaaaagctaaagaagagaaggaagaacagcgacttcgaaccaaa
caagctaaagaagacctggaaaattttctattaaatagtgacaaaatgaattctactgta
aaatattggaaagcagataatatttttggtgatttagatgtctggaaaaatgtctgtgat
cgtgatcgacgggaactcttcgaagatgtcttacacatgttggcaaagagagaaaaggag
gaagccaaagccttacgaaagcgtaatattaaagtgttttctgaaatccttgatagtatg
ccaagtctgacatactgtacaacatggtcagatgctcaacagatgttacttgacaatccc
agatttacagaagatccagatttacaaaacatggacaaagaggatgcattaatttgcttt
gaggaccatatacgtatgttagaacaggaatatgatgatgaaaaggaacgagaaaggcgg
agggtcaggcgccagcaaagaaaaaatagggagagcttccaggttctgttggatgaactg
catgatcaaggaaaattgaattcaatgtcactgtggatggatttgtatcctattgtcagt
caagaccttcgcttttcaaacatccttggacagccaggttcaacaccacttgatttattt
aaattttatgttgaggatctcaaatctaggtttcatgatgagaaaaagattgtaaaggaa
attctaaaggaccgagggattattgtggaaacgagtacaacatatgaggatttttcttcg
tgtttaaacacagacaaacgttctggcaatctggactctgggaatatcaagttaacttac
aatagtctcatagagaaagctgaagcacgagaaaaagaacggttaaaagaagaagcaaga
aaaatccggaggcttgaaggtgctttcaaggccatgttaaaacaagctagtccgtcaata
gattctatgacacgttgggaagatatacgggtacggttagaaaaagaaattccatttgaa
gcaataactcttgaatctgaacgaattcgattatacaaggagtaccaagtagcagtatta
gagcagtgttcacatcaccattctaagaagaagaaatccaaaaagcacaaactaaagcgg
tctcggtcaagatctcgatcgtctgaatcagatgatgacatttcatcccgtcataaattg
aagaaaaaaaagaaatctagatcagcatctcgctcaccaagttatatgtctgaatcagat
gatcaagaaatggaaagggcatcgaaacgacacaaaaagaaatccaaaaagaaaaaacat
ctttccagagctgactggaattcatcagacagtgacgtcagtgaaggggagttagagaag
cgacgacggcacctgctgcagcagctagaagctgaccaataa
DBGET
integrated database retrieval system
