Octopus bimaculoides (California two-spot octopus): 106881216
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Entry
106881216 CDS
T04127
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03010
Ribosome
obi04120
Ubiquitin mediated proteolysis
obi04137
Mitophagy - animal
obi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
106881216
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106881216
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106881216
04137 Mitophagy - animal
106881216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
obi03011
]
106881216
04121 Ubiquitin system [BR:
obi04121
]
106881216
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obi04147
]
106881216
Ribosome [BR:
obi03011
]
Ribosomal proteins
Eukaryotes
Small subunit
106881216
Archaea
106881216
Ubiquitin system [BR:
obi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
106881216
Exosome [BR:
obi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106881216
Exosomal proteins of colorectal cancer cells
106881216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
106881216
NCBI-ProteinID:
XP_014787008
UniProt:
A0A0L8I871
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All DBs
Position
4:complement(123119806..123127252)
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AA seq
157 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKNYTTPKKNKHKKKKVKLAVLKYYKVDENGKITRLRRE
CPNEECGAGVFMASHFDRHYCGKCYLTYVFNKPEERQ
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtaaaaacccttactggcaagaccatcacacttgaggtcgaacccagt
gatactatcgaaaatgtcaaggcaaaaattcaagataaggagggaattcctccagatcag
caaagattgatctttgctggtaagcaacttgaggatggccgtacgctgtcagactacaac
attcaaaaggagtcaacccttcatttggtccttcgtttgcgaggtggtgccaagaagcgc
aagaagaagaattacaccactcccaaaaagaataagcataagaagaagaaggttaagttg
gcagttttgaaatattacaaggttgatgaaaatggtaaaatcactcgtctgcgtcgtgag
tgtcccaatgaggaatgtggagctggtgtgtttatggcctcacactttgataggcattat
tgcggcaaatgctatctaacatatgtcttcaataagccagaggagaggcagtaa
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integrated database retrieval system
