Octopus bimaculoides (California two-spot octopus): 106881285
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Entry
106881285 CDS
T04127
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
obi03037
]
106881285
Cilium and associated proteins [BR:
obi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
106881285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_HPS5
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EML
TPR_IFT80_172
WD40
Beta-prop_WDR90_POC16_2nd
TPR_GEMI5
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
TPR_19
Consortin_N
HPS6
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
106881285
NCBI-ProteinID:
XP_052833890
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Position
29:complement(3329814..3363753)
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AA seq
1548 aa
AA seq
DB search
MAVFFDHCISADLAGVYTHTTWHPIERLLAIGVLFDDESGAGVYIFNETGDSVGVEPLKQ
GSAVSILQWHPTKLVLCVAWKDGAITLWRLDAKETSHMEQVHSTAVTSLCWSSFGARIVS
GDESGTLLIWKVDSKGRAMSKPVSQHNLPEPIQQIILQPLVNPESYTEVRNLVRAAVKGD
QKALDMFDLKGRQSDTKYSSIFGMSESFNFFCGGATGGVYHILENGTCTTLFSVSSRILN
LFYYTEQNILVTLTHNLMLSQHKVDSQTQKAEELMKVKLNGKSENPCIVWAGKGMLAMAS
GESVIRMFDLDKEENDQLSLENHQSYVSNEQILSVDFCPRRGMLAGGTQMGNVAMWSRVP
SAKSTTKKGREMKWKLHSPNVVGAPVRMLTWCESKNLLCVNTWRSVLILRESSMCYHLNH
QIAMIQISPTTLSIDAIDTGQRKTFECHVQVKGIYTTKGNFVVWNGKQAHVYEFSADNLE
VRVLATFETDSVNICIFEQSLLLLEQGTVKVRTFQGTVKQFLDFSEGEGQPVCLDISENF
LVIATDRGILKLFDLSRRKIRPHSVPKPMCEFIPDLGRIVSVKSNCTGSRISLLCMKTNE
QPDTNLYVWDVELDKVLTFSFDSSSEMSSDGGGDHIGEEKDDSKSHGAGDATPDGSNNQI
KVVAVSKGMTGRYPVSHFWDAKVPHLLSCEARLITEDTNNKMPTTGETEAEEEEEEEEEE
TGVNTEVVVIVSLFATDRGLLLQETSPLNDPDKFVIGLNVPYFYILQDSEEKNWRETPTP
TSPPLSEPMQKDDSQGSLNYIQHHQHQDQQQPTIIVARRTMRDFVGLETCDKGTQSAMLE
FCFHQAIGNMDEAFKAIKLIKNESVWENMAKMCVKTQQLDVAKICLGKMCHAQGVRALRK
MAHEPEVEVQLAVLAMHLNMADEAEKFLKNCKRYDLLNEFYQDCGQWDKALETAELYDRI
HLKCTYHCYAQHLQSEGIRHEAINNYKKAGTHMYEVPKMLYPQPQDLLDFIQKSKDKTLY
KWYAQYMESIEELAEAVKYYDIAQDYLSLVRVYCFQSDMEKASTICNETGDRAACYHVAR
QYEIQGDYQNAVNFFTRSETYGNAIRLCKENGMENQILNLALLGSPEDMVEAARYFEHKL
GMEGNAVMLYHKAGRLSKALELSFSSKQFGALQAMTLELDDRADPEVLERCADFFMENAQ
YDKAVELLAMAKKYWEAIQLLMEKSITVTPELAEKLSPPKNTSGGPDSGERLKILEGIGK
ICMLQGQYHLATKKYTQSGNRVKAMKCLLKSGDTEKISFFANVSRQREIYVMAANYLQSL
DWRNNTDIMKNIVNFYMKAKALDSLAAFYDVCAQAEIDEYQNYEKSLGALGEACKCLQKY
LDSDNDGNNGNNDDNIDNKMHIEYRLDELKQKVVLIKKFVNARKIYSNNPDDAVKLCLAL
LEEPNLEKSVRVGDVYAFLIEHYACQERWRVAYDQIEELKKKFPKMNVTYFVSPKTVEQI
YQHLDIPLPKELSSANNTDSRKKTSGQLSESPCEEDDEFVEEDIPEVY
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgttcttcgatcactgcatttctgctgatttggctggtgtctacacccacacg
acttggcacccaatcgagcgcctgctggctattggggttctcttcgatgacgagagcggc
gctggagtctacattttcaatgaaacgggagattctgttggtgttgaacccctgaagcaa
ggctccgcagtgagcattctgcagtggcacccgaccaaactggtgctgtgtgtcgcctgg
aaggatggcgccatcacattgtggaggctggatgcgaaggagacgagccacatggaacag
gttcatagcacggcggtgacttcgctctgttggagttcattcggggccaggattgtctct
ggagatgagtctggtaccttacttatatggaaggttgattcaaagggtcgcgccatgtcc
aaaccggtgtcgcagcataatctcccagaacccatacaacagattatcctccagccgctc
gttaatccagagtcgtacacagaggttcgcaacctggtccgagcagccgtaaaaggggac
cagaaggctctggacatgtttgatctgaaagggagacagtcggacaccaagtactcatcc
atctttggcatgtccgaatcattcaacttcttttgtggtggagcaacaggtggggtctac
cacatccttgagaacggaacctgcaccacccttttctctgtcagttcccgaatcctcaac
ctgttctattacaccgagcagaacattctggtgaccctcacccataatttaatgctaagc
cagcacaaggtggatagtcaaacccaaaaggccgaagagctgatgaaggtgaagctgaac
ggcaaatctgagaacccttgcattgtctgggcagggaaaggcatgctagccatggcatca
ggtgaatctgtgatcaggatgtttgatctagacaaagaagagaacgaccaactgtcactt
gagaatcaccagagttatgtttccaacgaacagatactaagtgtggatttttgccccagg
aggggcatgcttgctggagggacccagatggggaacgtagccatgtggtcccgtgtcccg
tcggctaagtcaaccaccaagaagggccgagagatgaagtggaaactgcacagtcccaat
gtggtaggggcaccagttcggatgctcacgtggtgcgaatcaaagaacttactgtgtgtc
aacacttggcggtctgtcctcatcctacgagaaagcagcatgtgttatcatttgaatcat
cagattgccatgattcagatcagccccactacactgtccattgatgctatcgatactgga
caacggaagacgtttgagtgtcatgttcaggtgaaagggatttatacgacaaagggaaac
tttgtggtatggaacggcaagcaggcacatgtttacgaattttctgcagacaacttggaa
gtaagagttttggccacgtttgaaacggattccgtcaacatttgcatctttgaacagagt
ctgttgctcctggagcagggaacagtgaaggtccgcactttccagggcacagttaagcag
ttcctggatttctcagagggcgagggtcagccagtctgcctggacatcagtgagaacttc
ctggtcattgctactgaccgtgggatcctcaaactctttgacctttcaagacggaagatc
cgaccacattccgtgccgaagccgatgtgtgaattcatccctgatttaggcaggattgtg
tctgtgaagtcaaactgcaccgggagcagaatcagtctcctttgcatgaagactaacgag
cagccagacaccaacctgtacgtctgggacgtggagctggacaaagtgttgaccttcagt
ttcgactcctcgtccgagatgagcagcgatggcggcggcgaccacattggtgaagagaag
gacgacagcaagtcacatggtgcaggcgatgcgacaccagatggcagcaataaccaaatt
aaggtcgttgcagtctctaagggcatgacagggagatacccagtttcacacttctgggat
gcaaaggtgccccacctgttgagctgtgaggcgaggctgatcacggaagacaccaacaac
aagatgcccaccaccggtgaaactgaggcagaggaagaagaggaggaggaggaggaggag
acaggagtaaacactgaagtggtcgtcatcgtatcactgttcgcgacagacagaggccta
ctgttacaagaaacaagccccttaaacgaccccgacaaatttgtgatcggactcaatgtc
ccctatttctatatcctgcaggactcagaggagaaaaattggcgagagacacccacaccc
acatccccaccactctcagaacccatgcagaaggacgactcccaggggtcactcaactac
atccaacaccaccaacatcaagaccaacagcagccgaccatcatagtggctcgcaggaca
atgcgtgactttgtcggtttggagacctgcgacaaaggaacacagtcagccatgttagaa
ttctgtttccaccaggctattggcaatatggacgaggctttcaaggcaatcaaactaatt
aaaaatgagtcagtgtgggagaacatggccaaaatgtgcgtaaaaacccaacaactggac
gttgccaaaatctgtctgggcaagatgtgccatgcgcagggcgtgagggcactgaggaaa
atggcgcacgaaccagaggtcgaggtgcagttggctgtcttagcaatgcacctgaacatg
gcggacgaagccgagaagttcctgaagaactgcaaaaggtacgacctgttgaatgagttc
taccaggactgtggtcagtgggacaaggccctggagactgcagagttgtatgaccgaatt
catctcaagtgcacttaccattgttatgctcagcatttacaatcagagggcatcaggcat
gaagcaataaacaactacaagaaggccgggacccacatgtatgaagtacccaaaatgttg
tacccgcaaccgcaagatctgttggactttatacagaagagcaaggacaagactctgtac
aagtggtatgcccaatacatggagagtattgaggaacttgctgaagccgtgaagtattat
gatatagcgcaggactatctctcattggttcgtgtctactgtttccagtcagacatggaa
aaggcatcgactatctgtaacgagaccggtgacagggctgcctgctatcacgtggcccgg
cagtatgagatccaaggagattaccagaatgctgttaacttcttcacaagatcagagact
tatggcaatgccatccggctttgtaaggagaacggtatggagaaccaaatcctgaacttg
gccctcctggggtcgcccgaggacatggtagaggcagccaggtattttgaacacaaattg
gggatggaaggtaacgctgttatgttataccacaaggctggccgtttatctaaggccctg
gagctatccttcagcagtaaacagttcggggctttgcaagcaatgactttggagctggat
gacagggctgaccccgaggttctggagaggtgtgccgacttttttatggagaacgcacag
tacgacaaggcagtggagttgttggcgatggcaaaaaagtactgggaagctatacagctt
ctgatggagaagagcatcacagtgaccccagagctggccgagaagttaagcccaccaaag
aatacatctggtggcccagacagtggcgagagactgaagattctggaaggaatcggtaag
atctgcatgcttcaaggacagtaccacctggccacaaagaaatatacacagtccggcaac
agagtgaaggccatgaagtgtctactaaagtctggtgacacagagaagatctcgttcttc
gctaacgtttcccgacagagggagatctatgtaatggctgccaactacctccaatccctc
gactggcgcaacaacaccgacatcatgaaaaacatcgtcaacttctacatgaaggccaag
gcgctcgactccctcgctgcattctacgatgtctgtgcacaggcggagatcgacgagtac
cagaactacgagaaatccctgggtgcgcttggcgaggcgtgcaagtgtctgcagaagtac
ctggacagcgacaacgatgggaacaacggcaacaacgacgacaacatcgacaacaagatg
cacatcgagtacaggctggacgaactcaagcagaaagtggtcttgatcaagaagttcgtc
aacgcacgcaaaatctacagcaataatccagatgatgcggtgaagctgtgcctagcgctc
ctggaggagcccaacctggagaaatcggtccgagtcggagatgtctacgccttcctcatc
gagcattatgcatgtcaggagaggtggagggtggcttacgaccaaattgaggaactgaaa
aagaaattcccaaagatgaacgtcacctattttgtaagtccgaagacggtggagcagatc
tatcaacacctcgacattccgttaccgaaagaactgagcagtgctaacaacaccgatagc
agaaagaagaccagtggccagctctctgagtcaccctgtgaagaagacgatgagtttgtg
gaggaagacatcccagaagtttactga
DBGET
integrated database retrieval system
