Octopus bimaculoides (California two-spot octopus): 106881377
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Entry
106881377 CDS
T04127
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03030
DNA replication
obi03410
Base excision repair
obi03420
Nucleotide excision repair
obi03430
Mismatch repair
obi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106881377
03410 Base excision repair
106881377
03420 Nucleotide excision repair
106881377
03430 Mismatch repair
106881377
03440 Homologous recombination
106881377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obi03032
]
106881377
03400 DNA repair and recombination proteins [BR:
obi03400
]
106881377
Enzymes [BR:
obi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106881377
DNA replication proteins [BR:
obi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
106881377
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
106881377
MMR (mismatch excision repair)
DNA polymerase delta complex
106881377
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
106881377
NCBI-ProteinID:
XP_014787230
UniProt:
A0A0L8FTL7
LinkDB
All DBs
Position
11:complement(21526366..21581319)
Genome browser
AA seq
1102 aa
AA seq
DB search
MSSGKRFPDKRDSSNPMKKPKYDDDDDEIPSMFEQDLEMLDQMESELLMGSESTDFVDDE
TDVSQKWARPPLPSIIDPAKDSVVFQQISVDYYIGAPMQGMPGSSIGPVPIIRMFGITME
GNSVLAHIHGFAAYFYVPAQSGFKKEHCQQFKNALNKAVMKDLRSNREDIKEAVLGVEYT
TKESIYGFHDNRKEPFLKITVALPRLIAPAKRLLEQGFQCLDYACHGFQTYESNIDFEIR
FMVDKGVVGCNWIELPKGKYQIRSKNSQSPNTPGNPAIKSHCQLEVDISWEDFISYPAEG
EWSKVAPFRILSFDIECAGRKGIFPEADKDPVIQIANMVVRQGKSEPFIRNVYTLKKCAP
VIGAQVLSYDSEKELLKNWSSFIRSVDPDIVTGYNIQNFDFPYLINRAKHLDVTNFPFLG
RIRNQRSVIKESTIQSKQMGKRENKIINIEGRVMFDLLQVLLRDYKLRSYTLNAVSFHFL
QEQKEDVQHSIITDLQNGTEQTRRRLAIYCLKDAILPLRLLEKLMCVINYMEMARVTGVP
LPYLLSRGQQIKVISQLLRKCREQDLLLPVQKMTTGDEYEGATVIEPTKGYYSFPIATLD
FSSLYPSIMIAHNLCYTTLLNQNTIKNLGLTSDQYIKTPSGNLFVKSTLRKGLLPEILND
LLSARKRAKADLKKETDPLKKRVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQSVTA
FGRMMIELTKQYVEEKYDTENGYEHKAKVIYGDTDSVMCNFGVETVAEAMELGKEAAEYI
SSKFIKPIKLEFEKVYFPYLLINKKRYAGLYWTNPNKYDKMDCKGIETVRRDNSPLVANL
INSCLKMLLIDRNPDGAVEYAKQTISDLLCNRIDISQLVITKELTKSDKDYAAKQAHVEL
ANRIKKRNPGSAPQLGDRVPYVIIAAPKNTAAYLKSEDPIYVLENNIPIDTEYYLTNQLS
KPLLRIFEPILGEKKAESVLLRGDHTRTKTLVISKVGGLAAFTKKKSTCIGCKAVLDSGN
KAVCKHCKSQESAIYQKEICQLSALEERFSRLWTQCQRCQGSLHEDVICTSQDCPIFYMR
KKVQKDVSDQGKLLHRFGHIDW
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtggtaagcgttttcccgacaaacgggattcctccaaccccatgaagaaaccc
aagtacgatgatgacgatgatgaaatcccttcgatgtttgaacaagatctggagatgttg
gaccagatggaaagcgagctattaatgggcagtgaaagtactgattttgttgacgatgaa
acagatgtgtctcaaaaatgggcacgaccacctttaccttccattattgatcctgcaaaa
gattcagttgtttttcaacaaattagtgttgattactatattggtgcaccaatgcaggga
atgcctggatccagtattgggcctgtacctatcatcaggatgtttgggattaccatggaa
gggaacagtgtgcttgcccatatccatgggtttgctgcatatttctatgtccctgcccaa
tctggtttcaaaaaagaacactgtcaacagttcaagaatgcattgaataaagctgtaatg
aaagacctcagatcaaaccgagaagatataaaagaggctgttcttggtgttgaatataca
acgaaagagagtatatatggtttccatgacaatagaaaggagccttttctgaaaattact
gtggctctgcctcgtctcattgcccctgctaaaagacttttggaacaaggctttcagtgt
ctagattatgcctgtcatggtttccaaacctatgaaagtaacattgactttgaaatcaga
tttatggttgataaaggtgttgttggctgtaattggattgagttgcccaagggaaaatat
caaatccgttccaagaatagccaaagtccaaacactcctggtaatcctgccataaaatct
cattgccagttagaggtagacatatcttgggaggattttatttcttacccagcagaagga
gaatggtcaaaagtggctccgttcagaatcctcagctttgacatagaatgtgccggaagg
aaaggtatatttccagaagctgataaggaccctgtcatccagatagccaacatggtagtg
aggcaaggcaagtcggaaccctttatacgcaacgtctacacgctgaagaagtgtgcacca
gtgataggggcccaggttctgtcttatgattcagaaaaggagttgctcaaaaattggtcc
agtttcattcgttctgtcgatccagacatcgtaacaggttataacattcagaactttgac
ttcccatatcttatcaatcgagcaaagcatctagatgtgacaaactttccattcctcgga
cggatccgtaaccaaaggtctgtgataaaagaatcaacaatacaaagcaaacagatggga
aagcgagagaacaaaatcattaacattgaaggacgagttatgtttgacttgttacaggtg
ttgctgcgagactacaaactgcgatcgtacacattgaatgcagtgtcattccacttcctg
caggaacagaaggaagatgttcagcactccatcatcacagatttacagaatggcacagaa
caaacccgacgccgtctggcaatctactgcctcaaagatgccattctacccttaaggctg
ctagagaagttgatgtgtgtcataaactatatggaaatggccagagtaacaggtgttccc
ttgccctaccttctctctagggggcagcaaatcaaagttatttctcagctactgcggaag
tgtagagaacaagacttgttgttacctgtacagaaaatgacaactggtgatgagtatgaa
ggagctactgtcattgaacctaccaaaggttactacagctttcccattgctacccttgat
ttctcatcactgtacccatccatcatgattgcacacaacttgtgttataccacattgcta
aatcagaacacaataaaaaatttgggtttgacatcagatcaatacatcaagacaccctct
ggaaacctatttgtgaagtccactttaagaaaagggttgttgcctgagattttaaatgat
cttctctctgcccgaaaacgtgccaaggctgatttaaagaaagaaacagatcctttgaag
aaaagggttttggatggtcgacaattggccttgaagatcagtgccaattctgtatatggt
tttactggtgctcaagttggcaagcttccatgtcttgaaatttcacagagtgtcacagcc
tttggacgtatgatgattgaactcaccaaacaatatgtagaagaaaaatacgatactgaa
aatggctatgagcacaaagctaaggtaatttatggtgatacagattctgtgatgtgcaat
tttggagttgaaactgttgcagaggcaatggaacttgggaaggaagcagcagaatatatt
tccagcaaatttatcaaacctattaaattagaatttgagaaggtttatttcccgtacttg
ttgatcaacaagaagcgttatgctggattgtattggactaaccctaacaagtacgacaaa
atggactgcaagggtatcgaaacggttcgtcgagacaactctccattggtcgctaatctc
atcaacagttgtttgaagatgcttctcatagacagaaatcctgatggtgccgtggaatat
gccaagcagacgatatctgaccttctctgcaaccgtattgacatctcccagttagtgatc
actaaagaactcaccaaatccgacaaagattatgcagcgaaacaagcccacgttgaactt
gctaacagaataaagaaacgtaacccaggtagtgcacctcagttgggagatcgtgttccc
tatgtgataattgctgcaccaaaaaacacagcggcttaccttaaatctgaggatcccatc
tatgtactcgagaacaatatccctattgatactgaatactacctcactaaccagttgtcg
aagccattgctgagaatatttgaaccaattcttggagagaaaaaagcagaatcggtcctc
ttaagaggtgaccacactcgaacaaaaacattggttatatccaaagtaggtggcctggct
gccttcaccaagaagaaaagtacctgtattggttgtaaagctgtgttggacagtggcaac
aaagcagtatgcaaacactgcaagtctcaggaatctgcaatctaccagaaagagatttgc
cagttgagtgctctggaagagcgtttctcacgtctctggacacagtgtcaacgatgccag
ggtagcctgcacgaagacgtcatctgtacaagtcaagattgtccaatcttctacatgaga
aaaaaagttcagaaagatgtgtctgaccaaggtaaactgctacatcgctttggtcacata
gattggtag
DBGET
integrated database retrieval system
