Octopus bimaculoides (California two-spot octopus): 106881379
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Entry
106881379 CDS
T04127
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106881379
03036 Chromosome and associated proteins [BR:
obi03036
]
106881379
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
106881379
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
106881379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
Tex_central_region
Spt6_S1
HHH_3
HHH_9
SH2
Tex_YqgF
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
106881379
NCBI-ProteinID:
XP_014787232
UniProt:
A0A0L8FSW1
LinkDB
All DBs
Position
1:58427592..58470369
Genome browser
AA seq
1695 aa
AA seq
DB search
MDFFEQEAEVSSDSDDSSLSDSIEIKKKKKEVVRKKRTIDDDDEEEEEDDEEKLAEEMKD
LINDDVEEEESDDNDSVTGKRKHDSDIEDDDQLEEDDYDLIEENLGIKVSRKQKRKRIRV
ASDDDDSDREDEESKTDAQMREIANTLFDDDEEEEEDAAEDSAVPASEREEEPKKDDLAL
DIEGSDEEESDIDDFIVDDEGQPISKGKKKKPVIHTDKSLQIAQDIFGVDFDFADLDKYD
EEEDEEDYEDEYEEDLEEGEAALKTKKAGRKRTSKKSIYEIYEPSELERGHFTDLDNEIR
TVDVPERFQLRQIRVTQTEEGELDEEAEWIYKQAFTTKLISKLSDHGEGHNSYYQPKSAS
AVNKIRDALNFMRNHLHEVPFIAFYRKEYVEPDLNINDLWRVWEYDEKWSQLRQRKQNLV
RLFEKMQNFQFEENSDPDKVLETRPLTSDDVARVKKVQTLEELRDCYQHFLLHYGSDIPK
MRNMEKKKKQEESNSDENAQEATDTIKQATRKTGYDLCLQAKLDDIAQKFGLTPEQFGEN
LRDNYQRHEVDQYPGEPSELAKDLISGQFPTEEDVLMGARHIVAMQIAHDPLVRQCIRSA
YFERAKIKVRPTKKGMKEIDESHPCYSCKYLRNKPVIDLKDDAFVKLSQAEEDGLLVIEF
SMDNFSGNTQTYFKEIQQLYYRDEFSKLVQQWNNQRSQALERALNKILYPQMEKEIRAKL
LKEGKDFVLRACCRKLHNYLKVAPYQADQQLEDDYDYDDNSNGLKVMGVAYSTSWDIPSF
AVIIDGNGQVTDFLRLQDLTKRRNAWRQRDKELKERDVAKLKKFISSKKPHVVAVSGESR
ESLMIIDDIKAIISELEQEQDMPPINVELVEHDLALVYENSNRATTDFREYPSVLRHAIS
IARRLQDPLVEFASLCNADEDILCLKYHPLQDCIVKEDLLNGLHLEFINRVNEVGVDVNQ
ALDFPHHASLLQFVCGLGPRKGSHLIRILKQNNSRLENRTQLVTVCHMGPKVFINCSGFI
KIDTSSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDTAEDANPAGALEEILES
PERLKDLDLDAFAEELNRQGYGNKHITLYDIRAELNHRYKDLRTSFRSPSNEEKFNMLTK
ETPQTFYAGKLVLCGVTGIARKRPQGDQLDEANPVRNEETGLWQCPFCQKKDFPELSEVW
SHFDAGNCPGSAVGVKVRLDNSVSGFIPTKMISDKMVTNPEDRVKIGQTLHCRITKIDID
RFQVELTCRSSDLRDKENNWKPQRDLYFDYEAEKSDAAKEEEKRKVQARQTYIKRVIVHP
AFHNISFKECEKLMANYDQGEVIIRPSSKGADHLTVTLKSADDVLQHIDVREEGKENAFS
LGRSLWIGNMEFEDLDEIIARYIQPMASFARDIMHFKYYKEGVSAKKDVIDKYLIDEKKK
APSRIPYVLTASPQYPGKFMLSYLPRNKPRHEYITILPDGLRYRSQTFHSLNSMIRWFKE
HFREPIPGTPSSSSRTPAPSFTTPALSMQGVDAATIHRAAAGLPNNIYNTLAQVATGTPQ
HIGSNSNYTGAYSGGNYYQPMATPMMTPMLTPSYHSQTLQATPAHSLATPSYQPTPRSAI
WPGATPSRTPQRTQPRPTTSSTDWAKAAEMWAKRKQSGASTPKPGTPRHGSSPAVRSVPN
TTEGTGDATPLIDER
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggacttttttgaacaagaagctgaagtttcttcagattctgatgatagttcattatct
gactctattgagattaaaaagaaaaagaaagaagtcgttcgtaagaaaagaacaattgac
gacgatgatgaggaggaagaagaagatgatgaagaaaagttagctgaagaaatgaaagat
ttgattaatgacgatgttgaagaagaagagagtgatgataacgatagtgtaactggcaaa
cggaaacatgactcagatatagaagatgacgatcaacttgaagaagatgattacgatctt
attgaagagaatttgggtattaaagtttcaagaaagcaaaaacgtaagcgtattcgagtt
gcatcagatgatgatgatagtgaccgtgaagatgaagaaagcaaaactgatgctcaaatg
cgagaaattgcaaacacattatttgatgatgatgaagaggaagaggaggatgctgcagaa
gatagtgcagtgcctgctagcgaacgagaagaagagccaaagaaagatgaccttgcactt
gatattgaaggttcagatgaagaagaatcagatattgatgattttattgttgatgatgaa
ggccagccaattagtaaaggaaagaagaaaaagcctgttatacacacagacaaatctttg
caaattgcacaagatatttttggtgttgattttgactttgctgatttagataaatatgat
gaagaagaagatgaagaagactatgaagatgagtatgaagaagacctggaagaaggtgaa
gctgctctgaaaaccaaaaaagctggacgaaaacggacatcaaagaaaagtatttatgag
atttatgaaccaagtgaattagagaggggtcattttactgatcttgataatgaaattaga
actgtagacgttcctgaaagattccagcttcgtcaaattcgtgttactcaaactgaagaa
ggagaattagatgaagaagcagaatggatttataaacaggcatttacaactaaactaatt
tccaaactgagtgaccatggagaaggacataattcttattaccaaccaaaaagtgcatct
gcagttaataaaattagagatgcattaaatttcatgaggaatcatcttcatgaagttcca
tttattgcattttatcgcaaagaatatgtagaacctgacttgaatataaatgatttgtgg
cgtgtctgggaatatgatgaaaaatggagtcaattaagacaaagaaaacaaaatcttgtt
cggctctttgagaaaatgcagaactttcaatttgaagagaattcagatcctgataaagtt
ttagaaactcgaccacttacaagtgatgatgttgcaagagtaaaaaaagttcaaacttta
gaagaacttcgagactgctatcaacatttcctcctccattatggatctgatataccaaag
atgcggaatatggagaagaaaaagaagcaagaagaatcaaactctgatgaaaatgctcaa
gaagctactgatacgatcaagcaggccactcgtaaaactggatatgacctttgtctacaa
gcaaaactagatgatattgcacagaagtttggactgactcctgaacaatttggggaaaat
ttacgtgataactatcagcgtcatgaagttgatcaatatcctggtgaaccttctgagctt
gctaaagacttaataagtggtcaatttccaactgaagaagatgttttaatgggtgctcgt
catatagtggcaatgcaaattgcacatgacccattagtgcgacagtgtattcgatcagct
tactttgagagagctaaaataaaagtaagaccaacgaaaaagggaatgaaagaaattgat
gagagccatccatgttatagttgcaaatatttgcggaataagccagttatagacctgaaa
gatgatgcatttgtaaaactttctcaggcagaagaagatggtctgttggtcattgaattc
agtatggataatttctctggaaatacacaaacatatttcaaagaaattcaacaactttat
tacagagatgaatttagtaaacttgtacagcaatggaataaccaaagaagtcaagcatta
gaaagagctctcaataaaattttatatccccaaatggaaaaggaaattcgtgcaaaatta
ctgaaagaaggaaaagactttgttttgagagcatgctgtcgtaaattgcacaactattta
aaagttgctccataccaagctgatcaacaacttgaagatgattatgattatgatgataac
agtaatggactgaaagttatgggtgttgcctacagtacctcctgggatataccatccttt
gctgtgataattgatggcaatggtcaggttactgattttctcagacttcaagatttaaca
aaacggcgcaatgcatggcgtcaaagagacaaagaattaaaggaaagagatgttgcaaaa
ttaaagaaatttatatcttcgaaaaagcctcatgttgttgcagtaagtggagaatcaagg
gagagcttaatgattatcgatgacatcaaagctattatcagtgaattagaacaagaacag
gacatgccacctataaatgttgaacttgtagaacatgatctggctttggtttatgaaaac
agtaatagagctactactgattttcgtgaatacccatcagtacttcggcatgctatttct
atagcacgtcgacttcaagaccccttagttgaattcgcatcattatgcaatgctgatgaa
gatatcctttgccttaagtatcaccctctacaggattgtattgtaaaggaagatctgttg
aatggtttacatcttgagtttatcaacagagtgaatgaagttggtgttgatgtcaatcaa
gcccttgatttccctcatcatgcttcactattacaatttgtgtgtggattaggaccaaga
aaaggttcccatcttataaggatactcaaacagaataatagtcgtttagaaaatcgaacc
caactagtcactgtctgtcacatgggaccaaaagtatttattaactgttcaggcttcata
aaaattgatacaagttctcttggagacagtactgaagcctatgttgaagtcttagatggc
tctcgtgttcatcctgaaacatatgaatgggctcgaaaaatggcagtagatgctttggaa
tatgatgatacagcagaagatgcaaatccagctggtgctttagaagaaatcttagaaagt
cctgaaagattgaaagatttagatcttgatgcatttgctgaagaactaaatagacagggc
tatggaaataaacatataactttgtatgacattcgagctgaactgaatcaccgttataaa
gatctgaggacttcgtttcgttctccatcaaatgaggagaaatttaatatgcttaccaaa
gaaactccacagacattttatgctggaaaattagtcctttgtggtgttactggtattgct
cggaaaaggccccaaggtgatcaattggatgaagctaatcctgttagaaacgaagaaact
ggtctatggcaatgccctttttgccagaaaaaagatttccctgagttaagtgaggtatgg
agtcattttgatgccggaaattgtcctggatctgctgttggtgtcaaagtccggttagat
aatagtgtatctggattcattccaacaaaaatgataagtgataaaatggttactaatcca
gaagatcgagtaaaaattggtcaaacacttcattgtagaattacaaagattgatatcgac
agattccaagtagaattgacttgcaggtcctctgatcttcgagacaaagaaaacaactgg
aaaccccaaagagatttatattttgattatgaagcagagaaaagtgatgctgcaaaggaa
gaagaaaaacggaaagttcaagctcgacaaacctatattaaacgagtaattgtacatcca
gctttccataacataagctttaaagaatgtgagaaattgatggctaactatgaccaaggt
gaagttataatacgtcctagtagtaagggagctgaccatttaactgttactttgaaaagt
gctgatgatgttctacaacacatagatgtgagggaagaaggaaaggagaatgcatttagc
ttagggcgatctctctggattggaaacatggaatttgaagatttagatgaaataattgcc
cgttatattcaaccaatggcatcctttgcacgtgatattatgcacttcaaatattataaa
gaaggtgttagtgccaaaaaagatgtaattgataaatatctgattgatgaaaagaaaaaa
gcaccatctaggattccatatgtattgactgcttcacctcagtatcctggaaaatttatg
ctttcttacttaccaagaaacaaacctagacatgaatatattactattttacctgacgga
ttgcgatatcgatcacaaacttttcattcattaaattccatgatacgttggttcaaagaa
cactttcgagaaccaattccaggaactccgtcaagtagttctagaacacctgctccatca
tttactacacctgctttgagcatgcaaggtgtagatgcagcaacaattcaccgagctgca
gctggtcttccaaacaatatttacaatactctggcccaagtagctactggaacccctcag
catattggaagcaattcaaattacactggtgcatatagtggtggcaattattatcagcct
atggccacaccaatgatgactccaatgttaactccatcataccacagtcaaacactgcaa
gcaacaccagcacattcattggctacaccttcttatcagcctactccaaggtctgctatc
tggcctggggccacaccaagtcgcactcctcaaagaacacaacctcgccccacaactagt
agtactgactgggcaaaagctgccgaaatgtgggctaagagaaaacaaagtggtgcctct
actcctaaaccaggaactccacggcatggcagcagtcctgctgttagatcagttcctaac
acaactgaagggactggagatgccacaccacttatagatgaacgctag
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