Octopus bimaculoides (California two-spot octopus): 106881452
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Entry
106881452 CDS
T04127
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
obi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106881452
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106881452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106881452
04121 Ubiquitin system [BR:
obi04121
]
106881452
03400 DNA repair and recombination proteins [BR:
obi03400
]
106881452
Enzymes [BR:
obi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106881452
Spliceosome [BR:
obi03041
]
Complex B
Other components
Prp19 complex
106881452
Complex C
Prp19-CDC5 complex
106881452
Ubiquitin system [BR:
obi04121
]
Ubiquitin ligases (E3)
U-box type E3
106881452
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
106881452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_EIPR1
NBCH_WD40
PEP5_VPS11_N
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF4
U-box
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
Beta-prop_ACSF4
eIF2A
Tricorn_2nd
Beta-prop_VPS8
zf-Nse
Cytochrom_D1
ATG16
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
106881452
NCBI-ProteinID:
XP_014787323
UniProt:
A0A0L8FT76
LinkDB
All DBs
Position
6:complement(5670781..5694979)
Genome browser
AA seq
511 aa
AA seq
DB search
MALCCALSNETPEHPCISPVSGHIFERRLLEKYIQENGTDPMNGEKLTTDVLVDIKASPL
IKPRPPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIVAGPAGYAAPTPQPAYAAEAGPEAAQQPTEGAGMTEEVLQ
KLQDKATLLTAERKKRGKTVPEGLASSEDIRGYRQLASHTGLHSASVPGIVSLDICLRDT
SKIVTGGNDKNAVVFNKDTEQVMAILKGHTKKVTSVIYHPEEDLVFTASPDSSIRVWGIQ
TAQCGQVIRAHEAPVTGLSLHATGDYLLSSSTDTYWAFSDIRTGKVLTKVTDTSSPHPLT
CAQFHPDGLIFGTGTEDYMIKIWDLKEQINVANFPGHMGPITSIAFSENGYYLATAAEDA
VVKLWDLRKLKNFKTIQLDDKYEVRSLCFDQSGSYLAVAGTDVRVYLCKQWQDLAVFNDH
TASATGVRFGHNATFVASASMDRSVKFFGMN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttgctgtgcacttagcaatgaaacccctgaacatccttgcatttcaccggta
tcaggtcatatctttgagcgtagacttttggaaaagtacattcaagaaaatggaactgat
ccaatgaatggggaaaagctgacaactgatgttcttgttgatattaaagcttcacctcta
attaaacctcgaccaccttcagctacaagtattccagccattctaaaatctttgcaagat
gaatgggatgctgtcatgttacacagtttcactctacgacaacaattacagacagctaga
caagaattatctcatgctttgtatcagcatgatgctgcctgtcgtgtaatagctcgtctc
acaaaggaagtaactgctgcaagagaagctttggctactctcaaaccccaagcaggtatt
gttgctgggcctgctggttatgctgcaccaacaccacaacctgcttatgcagcagaagca
ggacctgaagctgctcagcagccaacagagggcgctggcatgacagaagaagtccttcag
aagctccaagacaaagccactttgttaacagctgaacgaaagaagagaggtaaaactgtt
cctgaaggtttggcgagctcagaagatattcgtggctacagacaattggcttcacacact
ggtcttcatagtgctagtgttcctggtattgtatcattggacatttgtttgcgagataca
tcgaagatagttacaggtgggaatgacaagaatgctgttgttttcaacaaagatacagaa
caagttatggcaattcttaagggacatacaaagaaagttaccagtgtcatctaccatcca
gaagaagatctggtgtttacagcatctcctgatagcagcatccgtgtttggggcattcag
actgctcagtgtggtcaagtgattcgtgctcacgaagctcctgttactggtctgagtctt
catgctactggagattacttactcagtagttccaccgatacatattgggctttctcagat
attcgaactggtaaagtgttaactaaagtcactgatacatcttctccacaccctctgact
tgtgcacaattccatcctgatggtcttatttttggaactggaactgaggattatatgatt
aaaatctgggatttgaaagaacagatcaatgtagctaacttccctgggcacatgggccca
attaccagtattgcattttctgaaaatggttactaccttgctactgctgctgaagatgct
gttgtgaaactgtgggatttgcgtaaattgaaaaacttcaagactatccaactggacgat
aaatatgaagtacgcagtctttgttttgatcagagtggatcttatcttgctgtggcaggt
actgatgttagggtttacctctgtaaacagtggcaagacttggcagtttttaatgaccac
acagcatcagctactggtgtgcgatttggtcacaatgctacatttgtggcttcagctagt
atggatcgttcagttaaattctttggaatgaattaa
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