Octopus bimaculoides (California two-spot octopus): 106881546
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Entry
106881546 CDS
T04127
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
obi03037
]
106881546
04040 Ion channels [BR:
obi04040
]
106881546
Cilium and associated proteins [BR:
obi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106881546
Ion channels [BR:
obi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106881546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_1
EF-hand_7
Fer4_24
EF-hand_5
DUF4600
DUF6693
Bap31_Bap29_C
Motif
Other DBs
NCBI-GeneID:
106881546
NCBI-ProteinID:
XP_052826562
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All DBs
Position
9:complement(34252098..34328568)
Genome browser
AA seq
839 aa
AA seq
DB search
MSGTSRPASAQSRKAWQSNDDLGLVPTSNDSNQSYGMEPGMYGSKFNEQKEPPKPPVGFC
GKVMKGIRSLWATRDTEETKGDRELHVKTTLRELIIYIIFLAVLCVITFGMTSTSMYYYT
KAMTDLFIDSTYSGGGNFRTITTVNDVWKFAKGPLMDSLYWEKWYNEEPIVGERFIYYEN
KLLGLPRMRQLRVRNDSCIVHSDFKNTIKTCYDAYSENNEDHEGFGTNPPTEIANAFNYR
SKDDLDGTSHWGQLETYGTGGFVQDLDKTKNVSMKLVNALFDNLWIDRGTRVLFIDFTVY
NANINLFCVMRLVVEFPATGGALSSWRIASVKLIRYVNSLDYFVMACEAIFVLFILYYII
EETIEIKKHKLSYFKCFWNILDMLVIFISVLCIAFNVYRTSAVGDKLNQLLSSSNKYSDF
QFLAFCQTHFNNAIAVTVFMAWIKIFKYISFNKTMTQLSSTLGKCAKDLAGFAVMFFIIF
LAFTQLGYLIFGTQVKEFSSFESAFFTLFRIILGDFDFHQLESANRVLGPIFFILYVFFV
FFILLNMFLAIINDTYSEVKGDIANQKSEFEMTDYFKRGYQRMVDKLNFKRDKIVDIQKA
LQSADMNNDKQLDFEEWRQDMKSRGYADEEIELMFAKYDLNGDRVLDEDEQKKMNADLKA
QTDALNKEYDELEEKANNRCSSRMSYQEDSGEDSDDEDNGSKVSRSGRITNGVSYEEFTV
LSRRVDRMEHSIGSIVSKIDAVLVKLEAMEKAKIKRRETMAKMLDSITESTSNTDEMKRD
QMEKLVREELERWDSEASIGQANGRGDSPGSSSGAGTCGLRPRSSSRPGSGQNLGGSHL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggaccagccgccctgctagtgcccaatctcgtaaagcatggcaaagtaatgac
gatttgggtttagttcccacatctaatgatagtaatcaatcatacggtatggaaccgggt
atgtacggcagtaaattcaatgaacagaaagaacctcctaaaccaccagtaggattctgt
gggaaagtgatgaaaggtatccgttctttgtgggctacgcgtgacacagaggagaccaaa
ggagatcgtgaacttcacgtgaagaccactctaagagaacttatcatctacatcattttc
cttgctgtgctttgtgtcattacatttggaatgacaagcacatctatgtattactatacc
aaggccatgactgatttatttattgattctacatattctggtggtggcaacttcagaact
ataaccacagtcaatgatgtctggaaatttgcaaaagggccattgatggattctctttac
tgggagaaatggtataatgaagaaccaattgttggtgaaagattcatttattacgaaaac
aaactacttggcttacctcgaatgcgacagttaagagtacggaatgattcctgtattgtt
cattcagacttcaagaacacaatcaaaacctgttatgatgcttattctgagaacaatgaa
gaccacgaaggatttggtacaaatcccccaacagagattgctaatgcgttcaactatcgt
tccaaagatgatctagatgggacttcacactggggccagctagaaacatatggtaccggc
ggttttgtacaagatttagacaaaactaagaacgtttcaatgaaattagtaaatgctctt
tttgataatttgtggattgatcgtggaacgagagtcctctttattgacttcacggtctat
aatgccaacataaatctcttttgtgttatgagactggtcgttgagttccctgcaactggt
ggtgcactttcatcatggagaattgcaagtgtcaaacttatccgatatgtgaatagtctg
gattattttgtcatggcctgtgaagcaatttttgttctcttcatattgtattacatcatt
gaagaaactattgagatcaagaaacacaagttatcttatttcaaatgcttctggaacatt
ctggatatgctggtgatttttatatctgttttatgtatcgcattcaatgtctacagaacc
agtgctgtcggcgataaacttaaccagttactttcatccagtaataaatattcagatttt
cagttccttgcattctgccaaacacatttcaataatgcaattgctgttacagtttttatg
gcatggatcaagatcttcaaatacattagcttcaacaaaaccatgacacaactgtcatca
actcttggtaaatgtgccaaagatttggctggatttgctgtcatgttcttcattattttc
ctggctttcacgcaacttggttatctcatctttggaactcaagtgaaagaatttagcagt
tttgaaagtgcttttttcaccttgttccgaattatcttgggtgactttgacttccaccag
ttagaatctgcaaaccgagtattaggaccaatattctttattctctatgtattctttgta
ttctttatccttctcaatatgttcctggcaattatcaatgatacctattctgaggtaaaa
ggcgatattgctaatcagaagagtgaattcgagatgactgactactttaagcggggctac
caaagaatggttgacaaattaaacttcaaaagggataagattgttgatatccaaaaggct
ctgcaatctgctgatatgaacaatgacaagcaacttgactttgaggaatggcgccaagac
atgaaatcgcgtggttatgctgatgaagaaattgaattaatgtttgctaaatatgatctt
aatggtgacagagttcttgatgaagatgaacagaagaaaatgaacgctgatttgaaagca
caaacagatgcactaaataaagaatatgatgaattagaagaaaaggctaacaatcgctgt
agtagtcgcatgagttatcaggaggacagcggagaggacagtgatgatgaggacaatggc
tcaaaggtctcacgatctggacgcataactaatggtgtctcatacgaagaatttacagta
ctttctcgacgtgtggatcgcatggaacattccattggaagcattgtctctaaaattgac
gccgtccttgtgaaacttgaagcaatggaaaaagcaaagataaagcgccgagaaaccatg
gcaaaaatgcttgacagtattacagaatctacaagtaatactgatgaaatgaaacgagat
caaatggagaaacttgtgcgagaagaactggaacgatgggactctgaggcatccattggc
caagcaaatggacgaggtgactctccaggaagcagtagtggtgctggtacctgtggccta
cggcctcgctctagttccaggccaggctctggacaaaatcttggaggatctcatttgtaa
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