Octopus bimaculoides (California two-spot octopus): 106881551
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Entry
106881551 CDS
T04127
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
obi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106881551
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106881551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106881551
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106881551
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
Motif
Other DBs
NCBI-GeneID:
106881551
NCBI-ProteinID:
XP_014787465
LinkDB
All DBs
Position
13:complement(55894133..55922148)
Genome browser
AA seq
1618 aa
AA seq
DB search
MANRDIGGKIRSKRSYTSSKPYDRRKSLFTKFTDTVKDIFVPSWLSDFMKNNPTENSQNT
VIDEEDQNGNEIKDSDDNNYSSPHENPVVGDRRPAQPRPLHPEYTNYHQQVKAVSRRSAM
TGYAADHMPSNHEMQYPPGPRYSTSNHDGSLPHAGQISETMPRLGDKQNCLSLTGADIEQ
LKNRLHPSADAQLSSDMNYQSTTASIDNDDDGNGSISVDPEDSCDCESSKVWSNISYIKK
NESDSFRTKPRFEPSLLVSPFLKDSLLSDSQHESSFYGGKTQYGGASSRRKMRLKESNPY
SAATPYRRQVNAKPLHKNSTGAVTSSTAKRISDILEMMATPISDARKIPMNNHNLADTVL
QFSPSNFKRRNRPSVAVSTFSNDSEKLPPRGPPTVMLNSPSKATIAKNRQSAYSAFKSSP
TMENTQKQTEHINKVSSYTGKDTSKELARVFATTPQTASVEKTTTTVAATATASIPTASS
ATASSFFSIPLVTQPTATNVSEPSLSLGRPPISGKMKREKSYSTRGNSMKDMEDETEEPV
QLKTDFVLPVTNVPKFSFGISTSSFSNQSGRSTFTPLTTTISADKSNSGTAQSTATTSTI
TATPSFGASTSFGSNTSFNSSESDFKFSTPIQTTLPDTNLVSEGLPSVSDFKFSSPDKVI
VDSAKHTFQFSVSSTLPKPKSTSIFDEKPAFTLKTSGSKPVDSSSGSSSSSGGFGGIQPA
STLKTGSVMDVLGGQKKETSKAQVDPLMAKFLTVDSWDCDACMVPNKTESKKCVSCGTRK
PSAASTKAPTTTSSVVTDSLMAKFISSPDSWDCEICMLLNKPEATKCVACGASKPSATQP
KASVSLQPDSLMAKFMPSSGSWECDTCMIQNKAEATKCVACETPKPGCKPTLFTTTPATT
VAPTSSDKVDPLMAKFLKSDTWECSVCMLQNKESDSVCVACQTANPNAPPAPPPNAASHM
VHCLSQTEKQSVGTSNCQLDKALSMWKCDTCLVSNPLHCRKCIACDTPHIKPAVIATIAA
NSSGSVDVLPKFGVITSTGFKFSAASSSSDSAPISSAFKFGTSSTSDAAPISTGFKFGSE
TAPISSSFKLDPNVSSAPSNGFKFGVPSSQEDSTKSESGVGNSSGFKFGFVSPVPGNKPG
SDFKFGNSDDKKEKSDDQPKPASFVFSQPKSDGFPFSMKETTAPLTSLADPSTSNSGNSS
SLNCTTASAALPITAPTSTFATAVSSSPSSSSGFCFTGTDKPVAAGFKIPAPDTKTTSSA
ALPTFSVSTEKSATPIFGTAGSSDSTKNVASTFIFGSDSSKNTNAPSTGGPKSSFSLTSP
LKRERDDEADGPSGAKRSVTSASGNATPAADFNFSAAAQPNAIFSGGFTSFSDSANKNPF
SATTTNSSTVSNNQQFQFGNSLPAFGVISSNSSSGSGANSGSSSTTAPSTFTSPGFNFPL
VQTTASAPTVTTTTQSTPAFVFGSPASAASSPATFGASAPTFQFRPANPTPPLFNSKPFN
AATTTPATTNFTSNRSSEPFSFPNTGGVFQFTGKQSSDNTTTAATTAVNSNLFQFGQTPS
TNTNPGPLGTGTSPGFQFNSTPNFNFTSGNFTFSGNSDSSQPQSGRVVKKAIRRTRKV
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagagatattggaggcaaaattcgatctaagcgatcctatacgtcatccaaa
ccatatgataggcgaaagtcattgtttacaaaattcactgacaccgtaaaagatattttt
gttccatcatggctgtccgatttcatgaagaacaaccccacagagaattctcaaaatact
gtgattgacgaagaagatcaaaatggaaatgaaattaaagacagtgatgacaacaattat
tcgtcacctcatgaaaacccagttgttggtgaccgacgtccagctcaaccacggccgttg
caccctgaatataccaactatcatcaacaggtgaaagcagtctctagaaggtcagcaatg
acaggctatgcagctgatcatatgccgagtaatcatgagatgcagtatccgccaggaccg
agatattctacctcaaatcatgatggttcattgcctcatgctggccaaatttcagagacg
atgccccggttaggtgataaacagaactgtctctctctcactggagcagatattgaacaa
ctaaagaatcggttacatccttctgctgacgcccaactttcttcagacatgaattatcaa
tcaactacagcatctattgataatgatgatgatgggaatggcagcattagtgttgatcct
gaagatagctgtgattgtgaaagttctaaagtgtggagcaatatatcctatattaaaaaa
aatgaaagtgactcttttcggactaagcctagatttgaaccttctctgcttgtctctccc
ttcttgaaagattccttgctctctgatagtcagcatgagtcttcattttatggcggtaaa
acacagtatggtggggcttcttctaggagaaaaatgcgcctgaaagaaagtaacccatat
tctgctgccacaccatatcggcgtcaggtcaacgctaaaccactgcataagaacagtact
ggggctgtaacaagttctacagcaaaacggatctcagatattttagaaatgatggcaact
cctatatcagatgctcgtaagattccaatgaataatcacaatttggcggatacagttcta
cagttttctccatccaattttaaacgacgcaatagaccatcagttgcagtttcaactttt
agtaacgattctgaaaagctaccacctagaggtccaccaacagttatgctaaattcccca
tcgaaagctaccatagccaaaaacaggcagtcagcatacagtgctttcaagagctctcca
actatggaaaatacccagaagcaaacagaacatattaacaaagtaagcagctatacaggg
aaagatacttctaaggaactggctagagtctttgcaacaactccacagactgcctcagtt
gagaaaacaacaacaacagtagcagctacagcaacagcttcgataccaacagcatcatca
gcaacagcatccagtttcttttctatacccttggtaacccagccaacagctacaaatgtt
tcagaaccctcactttctctagggagaccaccaattagtggtaagatgaagagagagaaa
agttattctacaagaggaaattcaatgaaagatatggaagatgaaactgaggagcctgta
cagttgaagactgattttgtcctgcctgtcacaaatgtgcccaaattctcttttggaata
tcaacaagcagcttttctaatcaatccggaagatctactttcacacctcttactactact
atttctgctgacaagtctaatagcggaactgcacagtctactgcaacaacatcaactata
acagcaactcctagctttggtgctagcactagtttcggctctaacactagcttcaattca
tcagaatcagattttaaattctctactcccatacaaacaacactaccagatacaaacttg
gtatctgaaggcttaccttcagtttcagactttaaattcagttctcctgacaaagtaatt
gtagactctgctaaacacacgttccagttcagtgtttcatcaactttgcctaaaccaaaa
tcaacttccatctttgatgaaaaaccagcttttacactaaagacatctggcagtaaacca
gttgatagcagcagtggcagcagcagcagcagcggcggctttggagggattcaacctgct
tccactttgaagactggaagtgtaatggatgtgcttggtggtcagaaaaaagaaacttcc
aaagcacaagttgatcctttgatggccaagtttttaacagttgactcttgggattgtgat
gcttgtatggtcccaaataaaactgaaagcaaaaaatgtgttagttgtgggacacgaaaa
ccatctgcagcttcaactaaagctccgacgactacgtctagcgttgtaactgacagtttg
atggcaaagttcatcagttcacctgactcatgggattgtgagatctgtatgctgctaaac
aagcctgaagctacaaagtgtgtggcttgtggagcatcaaagccatcagcaactcaacca
aaagctagtgtatctttacaacctgatagcttgatggcaaaatttatgccatcgtctggt
tcgtgggagtgtgatacttgtatgattcagaacaaagcagaagctactaagtgtgttgct
tgtgaaacacccaaaccgggttgtaaaccaacactctttactactactcctgctacaacc
gttgccccaacttcatccgacaaagttgatccattaatggccaagttcttgaaatctgat
acatgggaatgcagtgtgtgtatgttacagaacaaagaatcagacagcgtctgtgttgcc
tgtcaaactgccaaccctaatgcaccaccagcaccaccaccaaatgctgctagccatatg
gttcattgtttgtctcagactgaaaaacaatcagttgggaccagtaactgtcagcttgat
aaagccttgtctatgtggaaatgtgatacatgtctcgtctccaatccactacattgtaga
aaatgtattgcttgtgacacccctcatatcaagcctgcagttattgccactattgctgcc
aattcctcaggttcagttgatgttctaccaaaatttggtgtcataacctcaacaggtttc
aaattcagtgctgcaagttcttcatctgattctgcaccaatttcttctgctttcaaattt
ggtacaagttccacgtctgatgcagcaccaatttctacaggcttcaaatttggttctgaa
actgcaccaatttcttcaagttttaaattagatcccaacgtgtcaagtgctccaagcaat
gggtttaaatttggagtaccatcttcacaggaagattcaactaaaagtgaatctggggtt
ggaaactcgtcaggttttaaatttggttttgtatcaccagtacctggaaataaacctggc
agtgactttaaatttggtaatagtgatgataaaaaagagaaaagtgatgaccagccaaag
cctgctagttttgtcttttcacaacctaaatctgatggctttccatttagcatgaaggaa
acaacggcacctttgacttctttagctgatccctctacttcaaacagtggcaacagttct
tcactgaattgcacaactgcaagtgcagcactacctattacagctcctacttctactttt
gctacagcagtttcatcatcaccatcatcatcatcagggttttgttttacggggacagat
aagcctgttgctgctggtttcaagattcctgctcctgatacaaaaaccacttcatcagcc
gctctaccgacattttcagtcagcacagagaaatcagcaacacctatttttgggactgca
gggagttctgacagcactaagaatgttgccagtacctttatatttggtagtgacagtagc
aaaaataccaatgctccctctactgggggacctaaatcatcttttagtctaacttcacct
ttgaagcgagaacgtgatgatgaagcagatggaccaagtggcgctaaacgttcagtgacc
tctgcttctggcaacgcaacacctgctgctgacttcaactttagtgctgcagctcaacct
aatgctattttctctggaggatttacatctttttctgactctgctaataagaatcctttc
tctgccaccactaccaacagcagcacagtttcaaacaaccagcagtttcaatttgggaat
tcattaccagcgtttggtgtaataagtagcaatagtagtagtggtagtggtgctaacagt
ggtagtagcagtacaactgctccttcaacatttacttctcctggctttaattttcccttg
gttcagacaactgcctcagcccctactgttaccactactactcagtcaaccccagctttt
gtgtttggcagtccggcctctgcagccagttctcctgctactttcggtgcctctgcacct
acatttcaatttagaccagccaacccaacaccaccattgtttaacagcaagccttttaat
gcagctactaccacacctgcaacaactaattttacctccaaccgtagctctgaaccattt
agcttcccgaatactggtggtgtgtttcagtttactggaaagcagtcaagtgacaatact
actactgctgctactactgctgtgaatagtaatttgttccagtttggtcagaccccttct
acaaacacaaatcctggtcctctgggtactggaacatcaccagggttccagttcaattca
accccaaatttcaattttacttctggaaatttcacattcagtggcaacagtgacagctct
caaccccagagtggccgtgttgtgaagaaagccatcagaagaaccaggaaggtgtaa
DBGET
integrated database retrieval system
