Octopus bimaculoides (California two-spot octopus): 106881555
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Entry
106881555 CDS
T04127
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106881555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106881555
03036 Chromosome and associated proteins [BR:
obi03036
]
106881555
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106881555
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
106881555
Chromatin remodeling factors
BAF complex
106881555
PBAF complex
106881555
GBAF(ncBAF) complex
106881555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
ResIII
QLQ
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
106881555
NCBI-ProteinID:
XP_014787474
LinkDB
All DBs
Position
13:55567441..55641988
Genome browser
AA seq
1630 aa
AA seq
DB search
MTSEDSPIMTAPPPQPPPVYPQDNVQMLQNAINSMEEKGMQDDPRYSHLVIIANRTKGVV
SGGGGNGTASGPGSQGSTGPPNMGGPGQGMGMSGPGMTPGNNMNGPNMNNSNSNMSNSNM
AGPNGGNMNSGMGGNPSSGTGVGAAGSGNPPNVYANMQGPNSCGPPGMNGPAMNNMSGPN
NAMVANMNSNMNGPPGPPNSSGANQQAIETSEQGPQGNNIPPSGMGGNPNMPAQGPPTGP
RTQFSASQLAQLRAQIMAYKLIARNQNLPDNIRYAIEGKRSGYGPPYQRPVDPHQMQQMR
MNQPQQQQPPPQGMVPAAQNYPPQMMSAQSQPNVQVQQRMPQQQPTSIQAIVSLQQRQNR
VSPVGKPTGLDPIEILNEREHRLGARIAQRIQELETLPATMPEDMQMKAMIELRALRLLN
FQRQLRQEVVSCMRKDTTLETALNTKAYKRSKRQSLREARVTEKLEKQQKMEQERKRRQK
HQEYLNAVLQHAKDFKEFHRNMSVKIGKLNKAVMTYHANTEREQKKEQERIEKERMRRLM
AEDEEGYRKLIDQKKDKRLAYLLQQTDEYVSNLTKLVVQHKIEQKKNKKKKKKKKKATDS
DNPDNLKEALIDETSTASETRISVLETSTGKILSGEEAPLSSQIETWLEQHPGFEVAPRE
EGESDEDDDDDSDEEEEEKPKLPGNPELPPSTQDDDEYRNDLTNYYTIAHSVREIITEQA
SMLINGKLKEYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLIEKKKVNGPF
LIIVPLSTLSNWMLEFDKWAPSVIKVAYKGSPNMRRTLTPQLKAGKFNALLTTYEYIMKD
KAILSKIRWKYMIIDEGHRMKNHHCKLTQILNTYYSAPYRLLLTGTPLQNKLPELWALLN
FLLPSIFKSCITFEQWFNAPFAMTGEKVELNQEETLLIIRRLHKVLRPFLLRRLKKEVES
QLPEKVEYVIKCEMSALQRLLYRHMQCKGVLLTDGSEKDKKGKGGTKALMNTIMQLRKIC
NHPFMFQHIEEAFADHLGIQGGIVSGPELYRVSGKFELLDRILPKLRAKDHRVLLFCQMT
SLMSIMEDYFVCRGLRYLRLDGTTKSEDRGHLLALFNQEESPYFIFLLSTRAGGLGLNLQ
AADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLMTVNSVEERILAAARYKLNVDE
KVIQAGMFDQKSTGTERRQFLQALLMQENDEEEQASDCFYVKVNKFRNGGEEDEVPDDET
VNQMLARTEEEFDLYQKMDLERRRQEARDPKRKPRLMESDELPEWLRKDEKEVERLTYEE
EEDKIFGRGSRSRKEVDYSDSLTDGQWLRAIEDGNLEEVEEKKKAKKAKKRKYVDDDDSN
SASTPQNKKEKKRRGRPPLEKQPPNPPKLTKMMKKLLDVVLSYRDSDGRVLSEVFISLPS
RKELPEYYEIIKKPVDFRKIKARIRDHKYRSLDDLERDVMLLCKNAQTFNVEGSLIYEDS
IVLQSVFTNARERLEKDGYLPSSDDSFSDDDDAGNPDSDDDQDDDDDEDEEEETPSQTVK
VKIKLNKDASSSAKKACKEAPSNIQEHFAAAQEIKPRKRKMRAAKNRPVISDDEDTEGSV
GVSVSCGEMN
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtgaagacagtccaataatgactgccccaccacctcagccacccccagtttat
ccacaggacaatgtgcaaatgttacaaaatgctattaattcaatggaagagaaaggcatg
caggatgaccctcgatactctcacctagtgataattgcaaatcgaaccaagggagtggtg
agtggaggaggaggtaatggcactgcaagtggtcctggatcacagggttcgacaggccct
cctaatatgggtggcccaggccaaggaatgggtatgagtggaccgggcatgacacctgga
aacaatatgaatggaccaaatatgaacaactcaaacagcaacatgtcgaactctaatatg
gccggaccaaatggtggaaacatgaacagtggaatggggggtaatccttcatctggtacc
ggtgtaggtgctgctggatcaggtaacccacccaatgtctatgccaatatgcaaggacct
aattcatgtggtccacctgggatgaatgggccggccatgaacaatatgtccggacctaat
aatgctatggttgcaaacatgaattccaatatgaatggtccacctggacccccaaattcc
tctggagctaatcagcaagctattgaaaccagtgaacaaggaccacaaggtaacaatatc
ccaccttctggcatgggaggcaatcccaatatgccagcgcaaggaccgccaactggacca
aggactcagttttctgcatcacagcttgcacaactcagagcacaaattatggcatacaaa
ttgatagctcgcaatcagaatttacctgataatatacgttatgctattgaaggaaaacgc
agtggttatggacctccatatcaaagacctgtagatccccatcagatgcaacaaatgagg
atgaaccagccgcaacagcaacagccaccaccgcaaggcatggtacctgctgctcaaaac
tatcctcctcaaatgatgtcagctcagagccaaccgaatgttcaagttcaacaacgaatg
ccacaacaacagccgacgtcaatccaagctattgtatctcttcaacaaagacaaaatcga
gtatcacctgtcggcaaaccaacagggctggatcctatagaaattctgaacgaacgggaa
caccgattaggagccaggattgctcagcgtatccaagaacttgagactttaccagcaacg
atgcctgaagacatgcaaatgaaggctatgattgaacttagagctctgagacttctgaat
ttccaaagacagttaagacaagaagttgtatcatgtatgcgtaaagacaccactctggaa
acggcactaaatacaaaagcttacaaacgtagcaagaggcagtccttgagagaggcacgt
gtcactgaaaaattagaaaaacaacagaaaatggagcaagaaaggaagagacggcagaaa
caccaggaatatttgaatgcagtcttgcaacatgctaaagacttcaaggaattccatcgc
aatatgtctgtgaagattggcaagttgaacaaggctgttatgacttaccatgccaacact
gaacgggaacaaaagaaagaacaagaaagaatagaaaaagagcgtatgcgacgccttatg
gctgaagatgaagaaggctacaggaaacttattgatcagaagaaagataagcgtttggcc
tatttactacagcaaactgatgaatacgtgtctaatctaacaaaacttgttgtacaacat
aagattgaacaaaagaaaaataaaaagaagaagaagaaaaagaagaaggctactgattct
gataatcctgacaatttaaaagaagctcttatagatgagacttcaacagccagtgaaaca
agaattagtgttcttgaaacaagtacaggtaaaatattgtctggagaagaagcacctctt
tctagtcaaattgaaacctggttagaacagcatcctggcttcgaagttgctccacgtgaa
gaaggggagtcagatgaagatgatgatgatgattcagatgaggaagaagaagaaaagccc
aaactaccaggaaatccagagttacctccatctacgcaagatgatgacgaatatcgtaat
gatcttaccaactactacactattgctcacagtgtccgtgaaattattaccgagcaagca
tctatgttaattaatggtaaactgaaagaatatcaggttaaaggcttggaatggctggtt
tcgttgtataataacaacctaaatggtattttagccgatgaaatgggtcttggcaaaact
attcagaccattggtctcattacatatcttatagagaagaagaaagttaatggacctttc
ctgatcatcgttccactctcaacattatccaattggatgttggaatttgacaagtgggct
cctagtgttattaaagtagcttataaaggttctccaaacatgcgccgtactctaactccc
cagttaaaagctggtaaattcaatgctcttttgacaacttatgaatatattatgaaagat
aaagcaattctatcaaagatccgttggaaatacatgataattgatgaaggccatcgtatg
aaaaaccaccactgcaaactaacacaaatccttaatacatattatagtgcaccttacaga
ttgttacttactggaacaccattacagaacaaactgcctgaactatgggcattgttgaat
tttctcctgccaagtatatttaagtcatgtattacctttgagcaatggtttaatgcacct
tttgctatgactggagaaaaggttgagctcaatcaggaagaaacgttactcatcattcga
cgtttgcacaaagtgctaaggccattcttgttaagaagactgaaaaaagaggtagaatct
cagttaccagagaaggttgaatatgttattaaatgtgaaatgtcagcattacaacgacta
ctttaccgtcacatgcaatgtaaaggagttttgctgactgatggatcagaaaaagacaaa
aagggtaaagggggtacaaaagccctgatgaatactattatgcagctgagaaagatctgt
aaccatccatttatgtttcaacatattgaagaagcatttgccgatcacttaggaattcaa
ggaggaatagtaagtgggccggaattataccgagtatctggaaagtttgaattacttgat
agaatacttccgaaattgcgtgccaaagaccatcgtgttcttcttttctgtcaaatgacg
tccctcatgagcatcatggaagattactttgtatgcagaggtttacgctatttacgactt
gatggaacaacaaagtcagaagacagaggccatcttttggctttatttaaccaagaagaa
tctccttattttattttcctgctcagtactagagcaggtggtttaggtttgaatttacaa
gctgcagacactgtcattatctttgattctgactggaatccacatcaagatctgcaagct
caggatcgtgcgcatcgtatcggtcaacaaaacgaagtacgagttcttcgtttgatgact
gtcaatagcgttgaagaacgaattttggcagctgcacgttacaaacttaatgttgatgag
aaagtgatccaagctggtatgtttgatcaaaagtctactggaactgagcgccgacaattc
ctacaagcactacttatgcaagagaatgatgaggaggaacaggcaagtgattgcttttat
gtcaaggtgaataaatttcgtaatggaggagaagaagatgaagtacctgacgatgagacg
gttaaccaaatgttggctcgaactgaagaagagtttgacttgtatcagaaaatggacctt
gaaaggcgaaggcaagaagctagagatccaaagcgtaagccccgattaatggaatctgat
gaattacctgaatggttaaggaaggatgagaaagaggtcgaacgtttaacctatgaagaa
gaagaagacaaaatatttgggcgtggctcccgctcaagaaaagaagtagattattcagat
tctctcacagatggccagtggctaagagctattgaagatggcaatctagaggaagtggaa
gagaagaaaaaggcaaagaaagcaaaaaagcgaaaatacgttgatgatgatgattcaaat
tctgcctcaactccacaaaacaagaaagaaaagaagcgacgtgggcgacctccccttgag
aaacaacctccaaatcctccaaaattaactaaaatgatgaagaaattactggatgttgta
cttagctatagagacagtgatggtcgagtccttagtgaagtctttattagtttgccatca
cgtaaagaattaccagaatactatgaaatcattaaaaagccagttgattttagaaaaatt
aaggctagaatcagagaccacaaatatcgaagtctcgatgatttggaacgggatgtaatg
ttattatgtaagaatgcacaaacatttaatgtagaaggttctctgatatacgaggattcc
attgtgctacaatccgtatttactaatgccagagaacgattagaaaaagatggctacctg
ccatcatccgatgacagcttcagtgatgacgatgatgctggaaatcctgatagtgatgat
gatcaagatgatgatgatgatgaagatgaagaagaagaaacacctagtcagactgtgaaa
gtaaaaattaaattaaataaagatgcatctagttcagcaaagaaggcttgtaaagaggca
cctagtaacatacaggaacattttgctgctgcccaagaaataaaacctcggaaaagaaaa
atgcgagcggccaaaaatcgtcctgttatcagtgatgatgaagacacagaaggtagtgtt
ggtgttagtgtttcctgtggtgaaatgaactga
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integrated database retrieval system
