Octopus bimaculoides (California two-spot octopus): 106881609
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Entry
106881609 CDS
T04127
Name
(RefSeq) titin homolog isoform X1
KO
K06084
F-box protein 20
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obi04121
]
106881609
Ubiquitin system [BR:
obi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
106881609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
CH
PDZ_6
CAMSAP_CH
PDZ_2
Motif
Other DBs
NCBI-GeneID:
106881609
NCBI-ProteinID:
XP_052827504
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All DBs
Position
11:complement(17528959..17736265)
Genome browser
AA seq
1699 aa
AA seq
DB search
MADEQSDPGEDTHWDLKYRSEEEMEFFTEMALHETQRWIEAVTRQKFHYPDDPRKSLENG
VLLCELLNCLKPGSVKKINRFPTPLAGLDNVNVFLEACRNTFGLTNTQLFDSCELQDLSQ
RAIADRSTYEASSGKKTTHLKEENDRRLRNVAVTIFFLGKSVIALNFKGPQIDPNAFAGL
FEHQHVDLIPEKTSAYSSSWESKRLQSNKYFSKSDQFSGSSGIGSRYTDDDQHIGDSSYE
SIGSKGSDDNQSICSDGMPSTTSGIYHFGDSLSSLQQSKSFDSDIYHSTPNLYDDTRKSP
ASADSADAMSSSSHSCQSSGSVEGSTQRKSMQRGTSVGSNDPLQFIKPKSNPLVVTAQKQ
ISLCEKNKVTRQSVSLDTEEDWSQNLASWKFRRQSRKSLSALEEPDETSQVTKRSVKTFK
EMVEDREKRKSFKNFNSTDDGTENDSLPASDSFQNENVSRKGDATTVSQTSISPKRDNTV
IKKEKSDTIEDNSKNNRSNRISGNYNNNATSNKNDNNTTDNFEDDVFAANTTEEPVLKQS
EVKSVESVRSPRTKNDVEANNLKNIEQTARLEEKQQPLPSVEFPSLVPPPPSSPPPPDNR
RRQQQQVLQNELPHQSKSNELKSSSNISSAPVERVSSPRPDKVDSSETDEGWIKDECEDF
VERTIKISQSLKSEKGFGFLIRGGVDQNTPVVVHRIELGSAADICELRPRDRIVSINRED
IQQHTQQKVQQIIDKANQHGQIELRVRRYLRGATYNEEEQNNISDKDVVVAKPILTVNSS
QSDPVVEPEVIKETKKRANYATPITRLTKTELHRTELSPEKKEEFHADIRSSPLKSSSEG
KQSNSVPSPTPNMQTKADLDNNNNESISVMKTTVTQSPPLINLEISEAETSNLPKATHQP
HQRSASSDSAMAASSLSSSPLSSSSSTSIQPPALLRRWQNSKTKNQQPSSSDMSISPKSD
DTNFETELKTEATLNSTFPPRHSVNLETPPLIQTRKRSDSCDQLLFQVRDIRSYARKKEN
TSRTATFLPKLDNQVRLQTTIAKDQPVTENLIEKAEKNTDNFSAPLKIQIPPQTPVSTSH
LQIDPKNQMPQATMYNKGSNLPEYNFNVELTYGEKVADRSSDDEGKSYSSLMNNSSQLLT
SPSRDGEEDEEEEDEATKEQRRIEEREQAALDAQKRLFEEQRMIAQERQLIEEEKKKRLQ
EQQQRKEAEEKRRLQEKEMLLQHEKEQLDKEKQRIAEEKQRVEEDRRMVQEQQQQLEQAK
KMMHRASLSGTIEKAIQQPSFSAQPQHSDSSRTMQPLSTSLSRLSLTSNSKYVAPRPRAS
SDVPLKSSPVQISPQKKLILFTKMESAVSRFSKNEPDPKESQRLTREDLLAMNRKPTPLQ
EKPEFNSNLPHHVSPIKREPPSKTELHSLNAVPKARHRDPKEWIAPENSDAGRKPAPWLA
DRKPEFSPSFSSYSTSPSSSSVSKEYSQASQLRSSYPVDNVPKYNNGGLRQEGLPKQSQV
GSQSHWMAEKSEQRRLSDHWTEGKEELWKGPSENRAVRPAGDRSSYSQRDLSVSRVGIKP
YVYKQASKFSPVTPAINQSTENALKSTNYRHSYASYEDSARPYDGLSHGYSSSNISTAGS
YSQHTSNPYGSMYTKNNNSARPFQGQGGITGFQQRDNSAATKLPNTRSLTSLSSDKTEQV
SVTGVEICSHCNEKLSKYP
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaacaaagtgacccgggggaagatacacattgggatcttaagtacaggtct
gaggaagaaatggaattttttactgagatggcattacacgaaacacaacgttggatagag
gctgtcacgagacaaaaattccactaccctgatgacccaaggaaatctctggaaaatggt
gtactactttgcgagttgctcaactgtctcaaaccaggttctgttaagaaaattaaccga
ttcccaacaccattggctggactggacaatgtcaatgtgttccttgaggcatgtcgaaac
actttcggtctaactaacactcagttattcgacagctgcgaactacaggacttgtcccaa
cgagcaattgcagacaggtcaacatatgaagcttcatctgggaaaaagacaactcatttg
aaagaggaaaatgatcgaagattgagaaacgttgctgtaacgatattttttttgggcaaa
agtgtcattgcattgaatttcaagggaccccaaattgacccaaacgcatttgctggttta
tttgaacatcagcacgttgacctgatcccggagaagacctcagcatattctagctcgtgg
gagagcaagcgattgcaatccaacaaatatttctcaaagtctgatcagttcagtggaagt
agtggtattgggagccggtacaccgacgacgaccagcacattggtgacagctcttatgaa
tcgattggctccaagggttctgatgacaaccagagcatatgcagtgatggaatgccttcc
acaacatctggaatataccactttggagacagcttgagttcactacagcagtcaaagagc
tttgacagcgacatctatcatagcacaccaaacctgtatgacgataccagaaagtcccca
gcttcagctgacagtgctgacgccatgtcctccagcagtcattcatgccagtcatctgga
agtgtggagggctccacccagcggaaatcaatgcagcggggaacatctgtcggctccaat
gacccactgcagttcatcaaaccaaaatcaaacccactggtagtgacagcccagaaacaa
atatcactatgtgagaagaacaaggttactcgtcaaagtgtttctttggatactgaagaa
gactggtcccaaaaccttgcttcctggaagtttcggagacagagtaggaagtctctatca
gcacttgaagagccagatgagacgtctcaggtaactaaacgttctgtgaagactttcaaa
gaaatggttgaagacagagagaaacggaagagttttaaaaattttaattccacagatgat
ggtacagaaaatgacagtttgcctgccagtgatagtttccaaaatgaaaatgtttcgaga
aaaggtgatgctacaacagtgtcacaaacatcgatcagccccaaacgtgataacactgtg
ataaagaaggaaaaaagtgacaccatcgaagacaacagcaagaacaacagaagcaacagg
atcagtggcaactacaacaacaatgccactagcaacaagaacgataacaacaccaccgac
aatttcgaagatgacgtgtttgcagccaacacgacagaagaaccagtgttgaaacagtca
gaggtgaaaagtgttgagagtgtaaggagccccaggacaaagaatgatgttgaagcaaac
aacttgaagaacatcgaacaaactgcaagactggaggagaagcaacaaccgctgccctca
gtggagtttccttcattagtgccaccacctccatcatcaccaccaccaccagacaaccga
agaagacagcagcaacaggtattgcagaacgaactgcctcatcaatccaaaagcaatgag
ctgaaaagcagctccaacatttcatctgctccagtggagagggtttcttctccaagacct
gataaggttgattcttctgaaactgatgaaggatggattaaagatgagtgtgaggatttt
gttgagcggacaatcaagatcagccaatcgttaaaaagtgagaaaggatttgggttttta
attcggggtggtgtggatcaaaacactccagttgttgtacatcggattgagttgggaagt
gcagcagatatatgtgagcttcgaccaagggataggattgttagtatcaatagagaagac
attcaacagcatacacaacagaaggtacagcagatcattgataaagcgaatcagcatggg
caaattgagttacgcgtccgacgatatctcagaggagcaacatacaacgaagaggagcaa
aataacattagtgataaagatgtggtagtagcaaagcccatccttactgtaaacagttcc
cagtcagatcctgttgttgaaccagaggtaataaaagaaacgaaaaaacgtgctaactat
gcaacacctataacacgattgacaaaaactgaacttcacagaactgagctttcaccagag
aaaaaagaggagtttcatgcggatattagatcatctccattgaaaagttcatcagaaggt
aagcagtcaaactcagtgccaagtccaactccaaacatgcagacaaaagcagatttagac
aacaataataatgaatcgatcagtgtaatgaaaacgacagtcacccagtccccgccattg
attaatcttgaaatctctgaggcagaaacatcaaaccttccaaaagcaacccaccaaccc
catcaaagaagtgccagttcagattctgctatggcagcttcttcattatcttcatcacca
ttgtcatcatcgtcatcaacatcgatccaacctcctgctctcctaagacgctggcagaat
tcgaaaacgaaaaaccaacagccatcaagttcagacatgtccatctctcctaagagtgat
gacaccaactttgagactgagctaaagacagaagcgactctgaattccacttttcctcct
cgacattctgtcaatttggagacaccacccttgatacaaacaaggaaaagatcagatagt
tgtgaccagttgttattccaggtgagagatatccgtagctatgcaaggaaaaaggaaaat
accagcagaactgcaacttttttgccaaaattagataaccaggtacgattgcaaacaact
attgccaaagaccaaccagtcacagagaacctcatagagaaagctgagaagaacactgat
aatttttcggcaccattaaagatccagattcccccacagacaccagtttcgacttcacat
ttgcagattgaccctaaaaaccaaatgccacaagcaacaatgtataacaaaggaagcaat
ctcccggaatataatttcaatgtggaactaacatatggagagaaagtggctgacagaagt
tcagatgacgaaggtaaaagctacagtagtttgatgaacaacagcagccagcttctaact
tccccttccagagatggagaagaggatgaagaagaagaggatgaagccacaaaggagcag
aggaggatagaagagcgtgagcaagctgcattggatgcacagaaacgcctgtttgaggag
cagcgcatgatcgcacaggagcggcaactgattgaggaggagaaaaagaagcgactccag
gagcagcaacagcgtaaagaagccgaagagaaaagacgactccaggagaaggagatgcta
ctgcagcacgagaaggaacaattggataaagagaagcaaagaatagcagaggaaaaacag
agagtggaggaagaccgacggatggtgcaggaacaacaacagcagttagaacaagcaaag
aagatgatgcatcgggcttctttgtctggcactattgagaaagcaatccaacaaccatct
ttctctgctcaacctcagcattcagactcttcaaggacaatgcaaccactttctacttct
ttgtctcgtctttctttgacgtcaaattcgaaatatgttgcaccacggcccagagcatct
tctgatgttcccctcaaatcaagccctgttcaaataagcccacagaaaaaactgattctg
ttcactaaaatggaaagtgctgtttcacgtttctccaagaatgagcctgacccaaaggag
agtcagcgacttactcgagaagatttgctagcaatgaatcgcaaacctactccattgcaa
gaaaagcctgaattcaactctaacctcccccatcacgtttcaccaattaagcgcgagcca
ccaagtaaaactgaacttcattctctaaatgctgttccaaaagctcggcacagagatcca
aaagaatggatagctccagaaaattctgatgctggtcggaagcctgctccttggttagcg
gaccgaaaacctgagttctctccatcgttctcctcttattctacatctccttcctcttct
tctgtatccaaagaatattctcaagcttcccaactccgaagttcctatcctgtggacaat
gttccaaaatataataatggtggacttcggcaagaaggccttccaaaacagagccaagtg
gggtcacaatctcactggatggctgaaaagtctgagcaacgtagactatcagatcattgg
acggaaggaaaggaagagctttggaaaggtcctagtgagaatagggctgtgagacctgca
ggtgacagatcgagctattcacagcgagatctctcagtttccagagtggggataaaacca
tatgtttacaaacaagcatctaagttttccccagtaacccctgctatcaaccagtcaact
gaaaacgccttgaaatccaccaactatcgtcattcatatgcctcatatgaggactctgcc
aggccatacgatggactctcccatggctactccagctcgaacatctccactgctggttct
tattcccaacacacttcaaatccatatggaagcatgtacacaaagaacaataactcagct
cgaccatttcaaggccagggtggaataactggattccagcaaagagataactctgcagca
accaagttacctaatactagatcattgacatctcttagcagtgataaaacagaacaagtg
tcagtaactggtgttgagatatgctcccattgcaatgagaagttaagtaagtatccctaa
DBGET
integrated database retrieval system
