Octopus bimaculoides (California two-spot octopus): 106881676
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Entry
106881676 CDS
T04127
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106881676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106881676
03041 Spliceosome [BR:
obi03041
]
106881676
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106881676
Spliceosome [BR:
obi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106881676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR54
Beta-prop_WDR75_1st
PQQ
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
106881676
NCBI-ProteinID:
XP_014787628
UniProt:
A0A0L8FS36
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Position
16:18219753..18269013
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AA seq
356 aa
AA seq
DB search
MPSSLHKLFPESDMHERDLAARQQMYTSIYAIVFSPCGKYLAAGNNYGYCAIFSLPSSLS
PEATENSWKPLFTFKASDDGPICSMTSTSRELICGCSGYIKAWLWSHIIKRTNKLAWALI
IPTKSFSVSEINSMVTDNKNGEKNLYAGCGDNLIYIYDLETGSLKSTLSGHKDYIHCVTL
CNTRQECVSAAEDGTVRIWDARSSNEAICMLEPYKNEMCGRPEFGKWLGCVAMDTGDDWL
VCGGGPKLSLWHMRSLSATTAFDTPKSCQKHALIHQDTILSAGSEPSVFHWSLNGELKAK
IPCTPTCVFKVDVNTNSKSNKVLCVAGNSSKLDVSTNFRYKAFSLTFHSSENVFTK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtctcttcacaaactttttcccgaatcagacatgcatgaacgagacttagct
gctcgtcagcaaatgtatacaagtatttatgccatagttttctcaccttgtggcaaatac
ttagcagctggtaacaactatggatattgtgctatattcagtttaccaagttccttgtct
cctgaagccactgaaaattcttggaaaccactgtttacatttaaagcctcagatgatggt
ccaatatgttccatgacgtctactagtcgagaattaatatgtgggtgcagtggctacata
aaggcatggctctggagtcatattatcaaacgaacaaataaattggcctgggctttgatt
atacccacaaaaagcttttctgtttctgagattaattccatggttactgataacaagaat
ggagagaaaaacctttatgcaggatgtggtgacaatcttatctacatttatgatctggaa
actggttcattaaagtcaacattgtcaggacacaaagattatatacattgtgtgacactg
tgtaacactcggcaagaatgtgtgtctgctgctgaagatggtactgtccgaatctgggat
gcaagatcttccaatgaagccatttgcatgttggagccatacaagaatgagatgtgtggc
cgtccagaatttggcaagtggttaggatgcgttgccatggatacaggagatgattggctg
gtgtgtggtgggggaccaaagctctctttgtggcacatgagatctttgtctgcaacaact
gcatttgatactcccaagagttgccaaaaacatgctttgattcaccaagatacaatttta
tcagccggcagtgagcccagtgtgttccattggtcgctaaatggcgaactgaaagctaaa
attccttgtacaccaacatgtgtcttcaaagtggatgtaaatactaactccaaaagtaac
aaggttctatgtgtggcagggaacagttcaaaactcgatgtgtctaccaacttccgttat
aaagctttctcattgacatttcattcatctgaaaatgttttcaccaaataa
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