Octopus bimaculoides (California two-spot octopus): 106881712
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Entry
106881712 CDS
T04127
Name
(RefSeq) DNA mismatch repair protein Msh3
KO
K08736
DNA mismatch repair protein MSH3
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
106881712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obi03400
]
106881712
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
106881712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
106881712
NCBI-ProteinID:
XP_014787674
UniProt:
A0A0L8FR99
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Position
3:complement(123362541..123413508)
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AA seq
1084 aa
AA seq
DB search
MPQPALSKKLKSKQKGTNGKQITISRFFDAKHATKNRENQDADCKTRDSKNVSSQSKSNC
NFEAAKKRKVSHNEDTTGTSSDFGKKLKSSLSSKIRLGLHEETQSKLNAFSLSTSHDKNI
DLEELKNRFASGLPDLDEQNDNVAKDNDAEMYVDPEDDKTPEAECKESSAKVKTVSHGSD
KLKSFPTIKYTPLEQQVVDLKAKYPGTILLIECGYKYRFFGEDAQIAADVLKITCNPDHN
FMTASIPTHRLFVHVQRLVTAGYKVGVVKQTETAALKAVSDNKSSVFMRQLTALYTKSTL
IGEDVAPLNDIARSDDTEANISQYLMSIFETPCEENKKSNESLSIGFVAVQPATGDFIYD
CFTDVISRNQLETRITHIQPVEILLPPTLSEATERLLKDTSVLSSSADDCIRIERLPEKK
FVYQQAFETVSNFYGNDHTVGGVIRLQDVIGLPSTVISCLSALISYLTEFKLERVLKLSS
GFKCFSLESSYMKLPAKSVQNLELLKNLTSGKSKGSLFWVLNKTLTKFGERRLRSWVCNP
LIKKRDIDERQLAVEELSSNKCECFDAMKKCLFKLGDLERGLTAILHKKCSPLEFATVCL
SLKNIASIFHTQKNMFADKIASPLLQTILQEIPDLLSDVAFFSDSVSLQHAKSNDKTQLF
VDDSQFPAIKDQKSKIQEVRNEIDQHRSMIRKILRVPSFNYITVSGTEFQIEVKNNMLNT
VPSEWIKISSTKTVSRFHSPFIQEKCKLLNQHKEQLEIVCNDSWIEFLNSFQERYQNYRK
AVSHLAVFDCLLSLAKVAEQDNYVRPQMVDNENCIMIEDGCNPIVNLLLSEHQQYVANDT
NLNAAKHRVMMITGPNMGGKSSYIRQVALIVLMAQIGSYVPAKSATLGIFDAIYTRMGAA
DDIYRGRSTFMVELQEASEIMNSATNRSLVILDELGRGTSTHDGLAIANATLRYFTEDVK
CITLFVTHYQLLGQFGDMYPDFVHNYHMSFLVHSKSSENEEYDASDAVTFLYQLVRGMAA
HSYGLNVARLAHIPPEILEKARKKSHQLENSLNKNRELKSDFLTIMKCPPENLSKLLSDM
IPSL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaccggcattaagtaaaaagttgaaatctaagcagaaagggacaaatggaaag
cagataacaatctccaggtttttcgatgcaaaacatgcaacgaaaaatagagaaaaccaa
gatgctgactgcaaaacgagagattccaagaatgtatcttctcagtcaaagtctaactgt
aattttgaagctgcgaaaaaaaggaaagtctcgcataatgaagataccactgggacatct
tcagattttggcaagaaattaaaatcatctcttagttcaaagatacgccttggcctccat
gaagaaacgcaatcaaaactgaatgctttttccttgtctacttcacatgataaaaacatt
gacttggaagaacttaaaaatagatttgcaagtggcttacctgatctagatgaacaaaat
gacaatgtagcaaaagacaatgatgctgaaatgtatgtggatcctgaagatgacaaaaca
cctgaagcagaatgtaaagagagctcagcaaaagtcaagacagtatctcatggcagtgac
aagttaaaatcttttccaacaataaaatatacacctttagaacaacaagttgttgatttg
aaagcaaaataccctggtactatcttgctcattgaatgtggttataaataccgatttttt
ggtgaagatgctcagattgctgcagatgttttaaagatcacctgtaatccagaccataat
tttatgactgccagtatcccaacacatcgtctgtttgtccatgttcaacgccttgtcact
gcaggctacaaggttggtgttgttaaacaaactgaaactgctgcactcaaagctgttagt
gacaataaaagttcagttttcatgcgccaattaactgcactttatacaaaatcaacatta
attggtgaagatgttgctccacttaatgatattgcccgcagtgatgatactgaagccaat
atatctcaatacttgatgtctatctttgaaacaccttgtgaagagaataaaaaatcaaat
gaatctctcagcattggttttgtggctgttcaacctgccactggagacttcatttatgac
tgtttcactgatgtgatcagtcgaaaccaacttgagactagaatcacgcatatccaacca
gtggagatattactaccaccaacactctcagaagcaacagaacgtttactcaaggacact
tctgttctaagctcttcagctgatgactgtatcaggattgagagacttccagaaaaaaaa
ttcgtttaccagcaggcatttgaaactgtcagtaatttctatggaaatgatcatacagtt
ggtggagtcattcgtttacaagatgtgataggattaccatcaactgtgataagttgtttg
tctgcacttatatcttatctcactgaattcaagttagagagagttctaaaacttagtagt
ggtttcaaatgtttctctctggaatcatcttacatgaagcttcctgccaaatctgttcaa
aatttggagttgttaaagaatctcaccagtggtaaatcaaaaggaagtttattctgggtt
ctcaataagacattgactaaatttggagaaaggagactccgctcttgggtttgtaatccc
ttaattaaaaaaagggacattgatgaacgccagcttgctgttgaagaactttcgtctaac
aaatgcgaatgttttgatgctatgaaaaagtgtcttttcaagcttggtgatcttgagagg
ggccttactgcaatactgcataaaaagtgctcacccttggaatttgcaacagtttgtctt
tcattgaagaatatagctagtatattccacactcaaaagaatatgtttgcagacaagatt
gcttctccgttactgcagacaatcctacaagagattcctgacttactgtctgatgtggca
ttctttagtgattcggtcagcctgcaacatgccaagtctaatgacaaaacccagttattt
gttgatgattcccaatttcctgccatcaaagaccaaaagtctaagattcaagaagtacga
aatgaaattgaccaacatcgcagtatgatcaggaaaattttgagagtgccttcctttaac
tatatcactgtttctgggactgagttccaaattgaagtcaaaaacaatatgttgaacaca
gttccatcagaatggattaagattagcagtaccaaaaccgtttctcgtttccattcacct
ttcattcaagaaaaatgtaaacttttaaatcaacacaaagagcaacttgagattgtctgc
aatgattcttggattgagtttctcaattccttccaagaaagataccaaaattatcgcaag
gcagtgtcacatcttgctgtattcgactgtctcctctctctagctaaggtagcagaacaa
gataattatgtgaggccccaaatggttgacaacgaaaactgtataatgatagaagatggc
tgtaatcccatagtgaacttgttactaagtgaacaccagcaatatgttgcgaatgatacc
aatttgaatgctgcaaaacatcgagttatgatgataacaggtcctaatatgggtgggaag
agctcctacattcgacaagtggccttgattgtcctcatggctcagataggttcgtatgtg
ccagccaaatcagcaacacttggtatatttgatgccatctatacacggatgggtgctgct
gatgatatctacagaggccgcagtacatttatggtggagctacaagaagcatcagaaata
atgaattccgctacaaatcgatctcttgtgatcctggatgaacttggacgtggcaccagc
acacacgatggtcttgctattgctaatgctactcttcgttattttaccgaagatgtaaag
tgtatcactctgtttgtcactcattaccagttactaggacagtttggagatatgtatcct
gattttgttcacaactatcacatgtctttccttgtccactcaaaatcaagtgaaaatgaa
gaatatgatgcctcagatgctgtaacattcctctaccagcttgtcagaggaatggctgct
cacagttatggattaaatgttgcacgtcttgcccacattccacctgaaatattagaaaag
gcaagaaaaaaatcacatcaattggagaactccttgaataaaaatagagaactcaaatct
gactttttgaccatcatgaagtgccctccagaaaatcttagcaaactactctcagatatg
attccatctttatga
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