Octopus bimaculoides (California two-spot octopus): 106882204
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Entry
106882204 CDS
T04127
Name
(RefSeq) uncharacterized protein LOC106882204 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106882204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106882204
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106882204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBS1_N
Motif
Other DBs
NCBI-GeneID:
106882204
NCBI-ProteinID:
XP_014788281
LinkDB
All DBs
Position
18:19190365..19281991
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AA seq
742 aa
AA seq
DB search
MARHRSVRTMNYEDEFFDDDDVEDCYGQSFDDKYCISPGTVAQFTFPRKSNLDLGSYISS
DSPSNVEPPIITPDSPKCSSKKVTYNSFDEARLNHCLDKIHEVLGDIHQDDILVECIKRH
KYDTEAALNELLATPGAPKPQRQPREGRKSQDFPLCELDDSFCNQNYCTSPTDCNQFSDR
NLQAFACRRMNSVGEEECSSYESAISDNFEVEIFQRKTSESEDSQEDQLVSLDQKMSKNS
IQEENQEMEGDFETHTVGNSSPSLCQKLSTDSTPAAVSSVTKPKFKNGSNKQELMNLFEK
AKKNKEQMEKDAKFSSVNKFGHSLSDGIEKNTWLGDSEDSFDIGDKPISLSSLIEQESGF
KSSLADLNNQRHQKTNNDKQCIKDPPKDKGSCAETCPQETCKNCSKNRKFSPKNTDKTSL
ADLTKTRFNLDSDVSLFGTELVKKDIKLKTSQKQTQKLIQSSSDISKSSFAKTFDFSRPS
KNKSTSKHLDSLKNTSEKNPLQNPKEIFSNINSSPPPQTVTGFSLCDLTNHKISTFPKKE
NGTTFPSHLNDSKYNLEVNEEEELKESLFKDDDCLDSALSLGSLISQVNLELSPKSDYIA
ENRLEDLCKRPKETKPSPESTPVHKTNNDNLSCSEKENNIYLTKEDPDMQIQKTAFKEPV
SLFGKVISYRAQKYSSNSTKKLKYPKFSYKVQMNGISTDWESTLFHHITPFDFSTPSPDD
IVKTRQKQAYHHRAPIAVEANS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacatcgaagtgtaaggacgatgaactatgaagacgagttttttgatgacgat
gatgttgaagattgttatggccagtcatttgatgataaatattgcatctctcctggaact
gtggcccagttcacatttcccaggaagtccaatcttgaccttggttcttacattagtagt
gattctccatcaaatgtggaaccgccaatcattaccccagattcaccaaaatgttcttcc
aagaaagtgacatacaatagttttgatgaagctcgtttaaaccactgtttggataagatt
cacgaggtgcttggggacattcatcaagatgatatacttgtggagtgcattaaaagacat
aaatatgacacggaagctgctttaaatgaattacttgccacaccaggtgcaccaaaacca
cagagacaacctagagagggacgtaaatcacaagactttcctctatgtgaattagatgat
agtttttgtaatcaaaattactgtacaagtcctacagattgtaatcagttttcagacagg
aatttgcaagcatttgcatgtcgaagaatgaatagtgtaggagaagaggaatgctcttcg
tatgaaagtgcaatttcagacaactttgaagttgagatcttccagcgaaaaacctctgaa
agtgaagatagtcaggaagatcagctagtatcattagatcaaaaaatgagcaagaattcc
attcaagaagagaatcaggaaatggaaggcgattttgagacacacacggtagggaattcg
tcaccctcactttgtcagaagctttcaactgatagcacccctgctgcagtaagtagtgta
acaaagccaaaatttaaaaatggatctaataagcaggaacttatgaatttgtttgaaaag
gcaaaaaagaataaagaacaaatggaaaaagatgccaaattttcgtcagtcaataaattt
ggtcattctttgtctgatggaattgaaaaaaatacatggctaggagatagtgaagacagt
tttgatattggagataaaccaattagcttgtcttcattgattgaacaggaaagtggtttt
aagtcttcacttgctgatcttaataatcagagacaccagaagacaaataatgataaacaa
tgtataaaagatccacctaaagataaaggtagttgtgctgaaacctgtccacaagaaact
tgtaaaaactgttccaaaaatagaaaattttctcccaagaacacagataagacaagttta
gccgacttaacaaaaacccgttttaatctcgattcagatgtttctctgtttggtactgaa
ctggtgaagaaagacataaagcttaaaacttcacaaaaacaaactcagaaacttattcag
tcttcttcagatatttcaaaaagtagttttgcaaaaacgtttgatttttcaagaccatct
aaaaataagagtacctctaagcatcttgattcgcttaagaatacatctgagaagaatccc
ttgcaaaatccaaaggagattttctcaaatataaatagttcacctcctcctcaaactgtt
acgggattttcattgtgtgatctcactaatcataaaatttctacttttcctaagaaagaa
aatggcactactttcccttctcacctcaatgactctaaatacaatctagaagttaacgag
gaagaagaactcaaagaatcattattcaaagatgacgactgtttggattctgcattatct
ctaggaagtttgattagtcaagtaaaccttgaacttagccccaagtctgattacattgct
gaaaataggcttgaagatttatgcaagagacctaaggaaactaagcccagtccagaaagt
actccagttcacaaaactaataatgataatcttagttgttccgagaaagaaaacaacata
tatttaactaaagaagatcctgatatgcaaatccagaaaactgcattcaaagagcctgtt
tccttatttggaaaagtaatttcctacagagcacagaagtattccagcaattctactaag
aagctgaaatatccaaaattttcatataaggtgcaaatgaatggaatatctacagactgg
gagtcaactttattccatcatatcacaccattcgatttctctacaccatcaccagatgat
attgtaaaaacacgacagaagcaagcttatcaccatcgagcgccaattgcagttgaagca
aatagctga
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