Octopus bimaculoides (California two-spot octopus): 106882225
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Entry
106882225 CDS
T04127
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106882225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obi04121
]
106882225
Enzymes [BR:
obi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106882225
Ubiquitin system [BR:
obi04121
]
Ubiquitin ligases (E3)
HECT type E3
106882225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
Arm
HEAT_2
Motif
Other DBs
NCBI-GeneID:
106882225
NCBI-ProteinID:
XP_014788309
LinkDB
All DBs
Position
24:complement(15294453..15369358)
Genome browser
AA seq
2051 aa
AA seq
DB search
MLKGRRKHVLWNIGRRNYYEQQAISDSKTNVMQVGFFRESALPETNPLVSCTASLISCGV
LCWGRDQEKVRRSSKRPGHTVLTFQVASSMIAGLFFVLCVFGGKTTAKGFPRETSDSSDK
VQKSRKRFNKETIEESASESEFFVAAHAYKNPIDSGGFGAKPKRIKSKIPVRTTKVDNPL
PIQLESSESLPQPSGSGSAVDSSYSKAIKKQGSRKNLRSGSHSEILPTSSIRLDNQVKSR
GKRKQTKKRESNPTSLTSELHLNNAGPSGTIIAAVTTEEDSLAAAAEVRPIPSKKIRTCI
QDLNSGKEASLLKASSKKTRSGVPNRSSTSRSGVNRLDNVQSGLKAKKTGSCASSRNGEE
SVQFSSTASSSAGATAMTSESESEESDMGRLQALLEARGLPSHLFGALGPRMHQLLHRTM
AGGTMNKVQQLLQGLQAVNDEGQQLTAVIEMCQLLVMGNEDTLAGFPVKQVVPALITLLQ
MDHNFDMMNHACRALTYMMEALPRSSAVVVEAVPVFLEKLQVIQCMDVAEQALTALEMLS
QRHSKSILQAANGGIAACLMYLDFFSISAQRSALTITANCVQNLTADEFHYIRDSLPLLS
ARVNHQDKKSVESCCLCFSRLVDNFQHDQRILKEIAVHGLLTNIQQLLVVSPPIINTGTF
VMVIRMLALMCGSCPDLAVVLLKQKIAETLCYLLVGSSDQASQSIELISRTPQELYEIVC
LIGELMPKLPSDGIFSIDSMLKKGSSVSGDAVIWQWRDDRGMWHPYALIDSRIIEAAHQS
GEDEVSLSTMGRAYTIDFNSMQQINEDTGTARPVQRKVNSLVASCIHSASSSSSSSSSSD
PNVEQCDSREEILKEDIDLASAFIQTLFAVLYEVYSSSAGPTVRHKCLQTLLRMIYYASS
NLLKVVLKNQPVSSHIAAMMASQDLKVVVGAIQMADVLMQKLPDIFSIYFRREGVMHQIK
KLTEIEVQSASSLPKGSTVAPGSASGSSSSLSSSNADAIERKDSYFSMVTVGATGESEEH
SSQIQLELPRIFDMEPVGSGSRGPFLRLSDVLKRKKPSKRGPTKKGNKTDDANDLGVKSP
SLCGSRSSSRGKASILLIVGKEFKSATSTKSSFLPSLNPRSWGKLGSLNVDKAILTKEGP
VSKMVSSNTYGHKEKVKTWIKEQAIRFLDQYFNSDTHSHPALNMLNRLCSATDNLTIEED
NGIQALQEICDIMRSSDVSPFEVIHSGLVNKLLQYLTANSATVARDERIRRFLHVFLNCP
APDSVFVKEIEVSDPPALSPLVSKLIGCLHHLEQFQVKVHDLPGGVTGTGRGSNALKFFN
THQLKCHLQRHPECSNLKQWKGGPVKIDPLALVQAIERYLVMRGYGRIQLEGGDDGSDED
NSDDDDVDTMAAVFINQVTARHKLEFLIGDHLLPYNMTVYQAVKQFSLPTEKEGSETDTD
SENPFGNAGIWVQTHTIWYRPASEQEDAVAATSPKKTRAETKSCKSSGRSRRGDELWNDG
LCPKIVPALNAYLTDKLPAFVTVQDLSLDVITLLRVLHAFNRYWSTMYEESSQLSPILSP
TEFISSKLTAKANRQLQDPLVIMTGNLPVWLAEIAAAAPFLFPFDTRQMLFYATSFDRDR
AMMRLQDNNTDSTTTDTTDRVAPRLERKRRTVSRVDILKQAEKLMDELASTKGLLEIQYE
NEVGTGLGPTLEFYALISKEVQRADLDMWRGDIVKQMDFSGSGSDVEYITSPCGLFPSPL
ARNTKAAVVNKIKAKFKFFGKFLAKALMDSRMIDVPISLVFFKWILGQEHSLTSKDLQYI
DPVVARSFYELEDILRQKKRIEADQSHTEESRQLALDSLTMDGCTIEELDLDFTLPGHVN
IELKKGGKDIPVTLENLEEYLQLVVHWNLVEGVSRQFEAFKEGFESVFPLSTLQCFYPEE
LEQLFCGSRSEVWEVKMLMECCRPDHGYTHDSKAVKYLFEILSSYLGEDQRRFLQFVTGS
PRLPVGGFRSLNPPLTIVRKTFSNSENPDNSLPSVMTCVNYLKLPDYSSVEVMRDKLNLA
SQEGQLSFHLS
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaggcagaaggaaacatgttctctggaatattggaaggaggaactattatgag
cagcaggctatttctgacagcaaaaccaatgtcatgcaggtggggtttttcagagaatct
gccttgccagaaaccaatccactagtctcttgtactgcttctttgattagctgtggggtg
ttatgctggggaagagaccaagagaaagtgagaaggtcatcaaagaggccaggacacacg
gtcctaacattccaagtggctagttctatgattgctggtttattctttgttctctgtgtt
tttggtggtaaaactactgcaaaaggcttccctagagagacttcagattcttctgacaaa
gtacagaaaagcaggaaacgatttaacaaagaaactattgaggaatctgcttctgagtca
gaattttttgtggctgcacatgcttacaagaaccctatagacagtggtggctttggtgca
aaacccaaacgaattaagtcaaaaattcctgttcgtaccactaaagtagataatcctttg
cctattcagttagagagctcagagagcctcccacaaccaagtggatcaggatcagctgtg
gattctagttattctaaagctataaaaaaacaaggatcacgaaagaatttgcgttctggt
tcccattcagaaattttgcccacttcaagcattcgacttgataatcaggtaaaaagccga
gggaaaaggaaacagaccaaaaagagagagagcaacccaacgtctttaacaagtgaactt
cacttgaacaacgctggtccatcaggtacaataattgcagctgttactactgaagaagac
agtttggcagctgcagccgaagtccgcccaataccttctaaaaagatcaggacttgtatt
caagatctgaacagtggaaaagaagcttctctattaaaagcatcatctaagaaaacaagg
agtggagtgccaaacagatcatctacttcaagaagtggggtaaacaggttggacaacgtc
cagtcaggtctcaaagccaaaaagacgggatcctgtgctagcagtagaaatggtgaggag
tcagtacagttttcaagtacagcatcaagttctgccggagccactgcaatgacttctgag
agtgaatctgaagaatctgatatgggcagattacaagcattgttagaagcgcgtggctta
ccatcccatctctttggagcccttggtccacgcatgcatcaactactgcacagaacaatg
gcggggggcaccatgaacaaagtgcaacaattattacaaggtcttcaagctgtcaatgat
gaaggacagcagctgacagctgttatagaaatgtgtcagcttcttgtgatgggcaatgaa
gacactttggcaggctttcctgtgaaacaagttgttccggctttgattacattgttgcaa
atggaccataactttgatatgatgaaccatgcttgtcgtgctcttacctacatgatggaa
gcattgccacgctcttcagctgttgttgttgaggctgtacctgtgtttttagagaaatta
caagtgatccagtgtatggatgttgctgagcaagctctaactgctttagagatgctttca
caaaggcacagtaaatctattttacaggcagctaatggcggcattgcagcttgcttgatg
tatttggatttcttctccatctctgctcaacgatcagcattaacaattacagcgaattgt
gtgcagaatttaacagctgatgaatttcattatataagagactctttgccattacttagt
gccagagtaaatcaccaagacaagaaatcagtggaaagctgctgcttgtgcttctctcgt
cttgttgacaactttcaacatgatcaaaggatcttgaaagaaattgctgttcatggtctt
ctcacaaatatccagcaattactggttgtgagtcctcctataataaacacaggaacattt
gtgatggtaatacgaatgctggcgcttatgtgtgggagctgtcctgatttggctgttgtc
ttactaaaacagaaaatagctgaaacattgtgttatttgctggttggttcctcagaccaa
gcttctcaaagtattgagctgatttccaggacacctcaagaattgtatgaaattgtttgt
ttaattggtgaattaatgccgaaactgccatcagatggcatattctcaattgattctatg
ttaaagaagggatcgtctgtcagtggtgatgctgttatttggcaatggagagatgatcgt
ggaatgtggcatccctatgcattgattgatagcagaatcattgaggcagctcatcaatca
ggtgaagatgaagtaagcctgtctacaatgggaagagcttatacaattgactttaactct
atgcaacaaatcaacgaagacactggcacagcacggccagttcagagaaaagttaattca
ttggttgctagttgtattcactctgcttcttcctcctcttcctcctcttcctcctctgat
ccaaatgttgaacaatgtgattccagagaggaaatattaaaagaagatatagatcttgcc
tctgcatttattcaaactctctttgcagttttatatgaagtatatagttcatcggctgga
cctactgtgagacataaatgtctacaaacattgttgagaatgatctattatgctagctca
aatcttctcaaagttgtcttgaagaatcaacctgtttccagtcacatagcagctatgatg
gcttcacaagatttaaaggtagttgttggtgccatacaaatggctgatgttctcatgcag
aaacttccagacatattcagcatttactttaggcgagaaggagttatgcaccagataaag
aagttaacagaaatcgaagtccaaagtgcatcttctcttccaaaaggcagtactgttgcc
cctggttcagcatcaggctcaagttcgagtctcagtagtagtaatgctgatgccattgag
cggaaagattcctacttcagcatggtaacagtaggagctacaggagaatcagaagaacac
agttctcaaatacaactggaattacccagaatcttcgacatggagcctgtgggcagtgga
tcccgggggccttttttacgacttagtgatgtcttgaagaggaagaagccatcaaagcgt
ggaccaacaaagaagggaaataaaactgatgatgctaatgatctcggagtgaaaagtccc
agtttgtgtgggagccgatcatctagtcgtggaaaagcttcgattctactcattgtaggt
aaagaatttaaatctgccacatctacaaagagttcttttttaccaagtttgaatccaaga
agctggggaaaacttggcagcttaaatgttgataaagctattcttacaaaagaaggtcca
gtctctaagatggtgtcatcaaatacatatggtcataaagaaaaggtgaaaacatggatc
aaagaacaagcaatcagattcctcgaccagtatttcaattctgacacccatagccatcct
gctttaaacatgttgaatcggttgtgttctgcaacagacaatcttaccattgaggaagat
aatggaattcaggcacttcaagaaatttgtgatattatgcgaagcagtgatgtctctcct
tttgaagtgatacacagtggccttgtgaataaactcttacaatacctcactgccaactct
gcaacagttgcaagagatgaaaggatacggcgttttctccacgtgttcctcaactgtcca
gctcctgattcagtgtttgtgaaagaaattgaagtaagtgatccacctgcacttagtcca
ttggtcagtaaactgattggctgccttcatcatttagaacagtttcaggttaaagttcat
gatcttccaggtggtgtgacaggcactgggagaggttcaaatgctcttaagtttttcaac
acacaccagttgaagtgccatttgcaacgacacccggagtgttctaatctaaaacagtgg
aaaggaggacctgtcaagattgacccattagctttggttcaagctattgagcgatattta
gtcatgagaggatatggaagaatacagttggagggtggagatgatggcagtgatgaagac
aactctgatgatgatgatgttgataccatggctgccgtattcatcaaccaagtaactgct
cgtcataaattagaatttttgattggtgatcacttattaccttacaatatgactgtgtat
caagcagtgaaacaattcagtctgccgacagaaaaggaaggaagtgaaactgacacagat
tcagaaaacccatttggcaatgcaggaatctgggttcaaactcacacaatatggtatcgg
cctgcttctgaacaagaagatgctgttgctgccacaagtccaaagaaaactagagctgag
acgaaaagctgtaaatcgtctggaagaagtcgacggggtgatgagctgtggaatgatggt
ctttgtcccaagatagtgcctgctttgaatgcatacctcactgacaagttacctgccttt
gttactgtacaagatctttctttagatgtaattacactgctgagagtgctccatgccttc
aatagatactggtcaaccatgtatgaagagtcttcccaactatctccaatcctttctcca
actgaattcattagttcaaaactcactgccaaagctaacagacagttacaggatccatta
gtcataatgactggtaatcttcctgtttggttggctgaaatagctgcagcagcaccattc
ctttttccctttgatactcgccaaatgcttttctatgctacatcatttgatcgtgaccga
gcaatgatgaggttacaagataacaatactgattctacaacaacagacacaactgaccga
gttgctccccgactggaacggaaaaggcgtacagtcagtcgagtggatatcttaaaacaa
gcagagaaactcatggatgagctggcttccacaaaaggattactggaaatacagtatgag
aacgaagttggtacaggattgggacccacattagaattctatgcattaatttctaaagaa
gtacaaagagcagatcttgatatgtggcgaggcgacattgtgaaacagatggatttttct
ggttcaggaagtgatgttgagtatattacatctccttgtggtttgtttccttctccactt
gctcgtaacaccaaagctgctgttgtcaacaaaatcaaagccaaatttaaattctttgga
aaattcttagctaaagcattgatggattcaagaatgattgatgtgccaataagtctggta
tttttcaagtggatcttaggccaagagcacagtctcacatccaaagatctacagtatatt
gatcctgttgttgctaggtccttttacgaactcgaagatattctcaggcagaaaaaaaga
atagaagcggaccagtctcatactgaagaatctcgccagttggctctcgacagtttgaca
atggatggctgcacaattgaagaattggatttagattttacccttccaggtcatgtaaat
attgaattaaaaaagggtggcaaggacattcctgtaacattagaaaacctagaagaatat
ttacagcttgttgtccattggaatcttgttgaaggtgtatcaagacaatttgaagctttt
aaagagggttttgaatcagtatttcctctttcaactttacagtgtttctaccctgaagag
cttgagcaactattttgtggaagtcgaagtgaagtctgggaagtgaagatgctaatggaa
tgttgccgtcctgaccatggttatactcatgatagcaaagctgtcaaatatttgtttgaa
atattaagttcataccttggagaagaccaacgccgtttcttacagtttgttactggctct
ccaagacttccagttggtggtttccgcagtttaaatccacctctgactattgtacgaaag
acattctctaattctgaaaaccctgataactcccttccatctgtgatgacttgtgtgaat
tatttaaaacttccggactattcttcagtggaagtgatgcgagacaagctgaaccttgct
tcacaggaaggacagctttcattccacctatcttaa
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integrated database retrieval system
