Octopus bimaculoides (California two-spot octopus): 106882315
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Entry
106882315 CDS
T04127
Name
(RefSeq) exosome complex component MTR3 isoform X1
KO
K12587
exosome complex component MTR3
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106882315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106882315
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106882315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106882315
NCBI-ProteinID:
XP_014788434
UniProt:
A0A0L8FMV1
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Position
3:complement(122630716..122662896)
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AA seq
267 aa
AA seq
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MPTDSKRISGPETSNTPYSYCKNIETRALLDENQRRWDSRLFNQMRPTFLRAGVVSQAKG
SAYIELNKTKVICAVYGPREVTRREEFSMKGQLTCELKFATFSCKLRRQHQPDSQEKDYS
IQLLEALEPAVCLHKFPKAQVNVYATVLENDGSILAAAITAASVALAYAGIEMYDLVVST
SVRISNKCILLDPSREEEFKPQKEVDENNASLTVAYMPSLNQISALTSSGECVLEMVTKA
IKLCIDSCQKIYPVIQHCLIKSKGFDQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgacagcaaacgtatttcgggtcctgaaacatcaaatactccttattcatac
tgtaaaaacattgaaacacgggctttacttgatgaaaaccaaagaagatgggactccagg
cttttcaatcaaatgcgacctacatttttacgtgctggagtagtcagtcaagccaaagga
tctgcttacattgaactgaacaaaaccaaagttatctgtgctgtttatgggccacgggaa
gttacacgccgagaggaatttagtatgaaaggtcaactgacatgtgagttaaagtttgct
acattctcatgcaaacttcgccgacaacatcaacctgatagtcaagaaaaagattactct
atacaattacttgaggcacttgaaccagcagtttgtttgcataaatttccaaaggcacaa
gtgaatgtatatgcaacagttctagaaaatgatggcagcattcttgcagctgctatcact
gctgcatctgtagctttggcatatgctggcattgagatgtatgatttggttgtcagcact
agtgtacgtatttccaataaatgcatcttattggatccaagcagagaagaagagttcaaa
ccacaaaaagaagtggatgaaaacaatgcaagtctcacagttgcctatatgccatccttg
aatcagatatcagctctaacttccagtggtgaatgtgtgttggaaatggtaacaaaggcc
attaagctatgtattgatagttgccaaaaaatttaccctgtcattcaacactgcctaatc
aagtcaaaaggatttgatcaataa
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