Octopus bimaculoides (California two-spot octopus): 106882525
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Entry
106882525 CDS
T04127
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106882525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106882525
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106882525
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
106882525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
106882525
NCBI-ProteinID:
XP_052834509
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All DBs
Position
2:complement(104681196..104690667)
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AA seq
228 aa
AA seq
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MFAILPGNEYENKIAWKTTAVGKRTSEDSQDPSFSLITFRKKGQKLCQLTDDKCSGNGTY
IRNGYIYSSLAGFLHTETTEDKTLVEVCTTKTENIVPSVDALVTAKITNVNPRFCKCSIM
NVGKIRLRESFRGMIRKEDVKATEKDKVEMYQCFRPGDIIVAKVLSLGDAHSYLLTTAEN
ELGVVVATSEAGYPMVPISWKEMQCPHTLIKEKRKVAKVQPQYIQNPE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaatattacctggaaacgaatatgaaaacaaaatcgcgtggaaaacaacggcg
gtggggaagaggacttcggaagattctcaagatccgagtttttccctcataacttttagg
aaaaaagggcaaaagctttgtcaactaactgatgataaatgtagtggaaatgggacttac
atccgaaatggttatatttattcaagcctagcaggtttccttcatacagaaaccactgaa
gataaaacattggtggaagtatgcacaactaaaacagaaaatattgtgccatcagttgat
gcactagttacagcaaagataactaatgtgaaccctcgattttgtaagtgttctataatg
aatgttggaaaaattagattacgtgaatcatttagaggaatgatacggaaagaagatgtg
aaagctactgagaaagacaaagttgaaatgtatcaatgtttccgccctggtgatatcatt
gtagctaaagttctctcactgggagatgcacattcatatctgttgaccacagctgaaaat
gaactaggagtagtagtcgcaaccagtgaagcaggttatcctatggtacccatcagctgg
aaggaaatgcagtgtccacataccttaataaaagaaaaacgtaaagtagccaaagttcag
ccccaatatatacagaatcctgaataa
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