KEGG   Octopus bimaculoides (California two-spot octopus): 106882765
Entry
106882765         CDS       T04127                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi03018  RNA degradation
obi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106882765
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106882765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obi03019]
    106882765
   03041 Spliceosome [BR:obi03041]
    106882765
Messenger RNA biogenesis [BR:obi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106882765
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106882765
Spliceosome [BR:obi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106882765
 Complex C
  U2 snRNP components
    106882765
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 106882765
NCBI-ProteinID: XP_014789033
UniProt: A0A0L8FKG7
LinkDB
Position
27:3563195..3568857
AA seq 96 aa
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQFLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADECDTQLLQDAARKEAAQNKQR
NT seq 291 nt   +upstreamnt  +downstreamnt
atgttgttctattctttcttcaaatctttagttggtaaagatgttgttgtggaactaaag
aatgatctcagtatttgcggcactttgcattcagtggaccagtttttaaacataaaacta
accgacatcagtgttacagatcctgaaaaatatccacatatgctctctgtaaagaattgc
tttatccgtggctccgttgtgcgttatgtccagttgccagcagatgaatgtgatacccaa
ctgttacaagacgcagcacgcaaagaagctgctcagaacaagcagaggtaa

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