Octopus bimaculoides (California two-spot octopus): 106883258
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Entry
106883258 CDS
T04127
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106883258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obi03400
]
106883258
Enzymes [BR:
obi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106883258
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
106883258
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
106883258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
HHH_2
HHH
NTP_transf_2
PsbU
Cdd1
Motif
Other DBs
NCBI-GeneID:
106883258
NCBI-ProteinID:
XP_014789680
UniProt:
A0A0L8FHV3
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All DBs
Position
5:complement(118460091..118468122)
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AA seq
336 aa
AA seq
DB search
MSKRKNPNTENLNSDFCDFLMELANYEKNVTRAMHKYNVYRKAAGLLAKHPTRIKNGEEA
KRLNGIGDKIAKKIDEFIRTGQLEKLNKIRADDTNMAINELTKVSGIGPAAAANFAKDGI
KDIEDLRKITDKLNHHQKIGVKYFEDFELRIPREELTSLRDKILAGIQKVDSRYTAKVCG
SYRRGAASSGDIDVLLTHPDYVATDKKKPELLKAVVKHLTDKGLVTDTISMGDSKFMGVC
RLPEDDKEIKRHFRRFDLRLIPHDQYYCALLYFTGSDMFNKDMRGRALENGFTLNEYCIR
PMGSTGIPGESLPVTSEEDIFDYIGMTFKKPSERNL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgtaaaaatcctaataccgagaacctgaattcagatttctgtgactttctg
atggagcttgccaattatgagaagaatgttacacgtgccatgcacaagtacaatgtttat
cgaaaagctgctggtcttcttgctaaacatcctacgaggattaagaatggagaagaagcg
aagagactgaatggtattggagataaaattgctaaaaaaattgatgaattcattcgtaca
gggcaacttgagaagctgaataaaatcagagctgatgacaccaatatggcaatcaatgag
ttgaccaaagtatctggaataggtccagcagcggcagcaaactttgccaaagatggcata
aaagatatcgaagacctcaggaagatcactgataagctaaaccatcatcagaaaattggt
gtgaaatattttgaagactttgaactgagaattcctcgtgaagaactaaccagtttacga
gacaaaatattggcaggaatccaaaaagtcgactccagatacacagctaaagtttgtgga
agttaccgaagaggggctgcttcttctggagatattgatgttttgttaacacatccggat
tacgttgctacagataagaagaaacctgagttgctgaaggcagtggtaaaacatctcact
gataaaggtttggtaactgacactatctctatgggggactcgaagtttatgggggtatgt
cggcttccagaggacgacaaagaaatcaagcgacatttccgaagatttgatctccgtttg
atccctcatgaccagtattattgtgcgctactttatttcactggcagtgatatgtttaat
aaagacatgcgaggtcgtgctttggaaaatgggtttacacttaatgaatactgcattcgg
ccaatggggagtacaggaattccaggtgaatctctgcctgtgacttctgaagaagatatc
tttgattatattggaatgacattcaagaaaccgtcagagcgtaatttataa
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