Octopus bimaculoides (California two-spot octopus): 106883391
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Entry
106883391 CDS
T04127
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi04120
Ubiquitin mediated proteolysis
obi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106883391
04120 Ubiquitin mediated proteolysis
106883391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obi04121
]
106883391
Enzymes [BR:
obi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106883391
Ubiquitin system [BR:
obi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106883391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-HC5HC2H
zf-RING_5
zf-RING_11
zf-RING-like
zf-ANAPC11
FANCL_C
PHD_NSD
TonB_N
Motif
Other DBs
NCBI-GeneID:
106883391
NCBI-ProteinID:
XP_014789870
UniProt:
A0A0L8FH62
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All DBs
Position
16:34202378..34247228
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AA seq
617 aa
AA seq
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MRAFMLTGFSFLLTTVVIANAYYQKSQFYPSVVYITKSNGSMAILYIQAFVFVVLMGKLM
RKIFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFNPRFVAMFTLLLFLKCFHWLAE
DRVDYMERSPMITIRFHIRVMSLIIALASVDLHFINHAYYSTLLRGASVQLVFGFEYAIL
LTVVLMTLTKYILHAFDLQSENPWENKAVYLLYTELIMGLIKVLLYVLFMVIVIKVHTFP
LFTIRPMYLSVRAFKKALNDIVMSRRAIRNMNTLYPDATPEELSSGDNVCIICREEMVTA
CKKLPCNHIFHASCLRSWFQRQQTCPTCRMDILRIPRPQPAQPQQAQPQQNVPQPPLQPP
HPQFPHNMVFPGFPPMPLWAPNMPPPPPPPPTQTTSQQQTVNPVSTQNTSNTTTTTNSTT
TTTTNTTTTTTTTATAEPSMSVPESQGFPGTSQNNMSFLSFPPLFSSFVLQNQSVLSGLS
TEELASLEGQERCNIEARIQWLRDIQTLLDGAMVLMNQYNQVAAHSGIQGISMLPRNVDQ
PNTSSHTKDHSVSQNQLSNNESAGKPNENTPNKSEDLDYLDLEGATGETPKKSSSSPEAE
LRRRRLQHFISQSNETK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagggcctttatgctcaccgggtttagttttctgctcaccactgttgtcatagccaat
gcatattaccagaaaagtcagttttatccatctgttgtctacataaccaaatctaatggg
agtatggcgattctctatatacaagcttttgtttttgttgtcctgatggggaaactcatg
aggaaaatattctttggtcagctaagagcagcagaaatggagcatctaatagaaaggtct
tggtatgctgttactgagacttgcttggcttttacagtttttcgagatgacttcaatcca
cgatttgtggccatgttcacgttattgttatttttgaaatgttttcactggcttgctgaa
gatagagtagactatatggaaagaagtcccatgataacaattcgattccatattagggtc
atgtctctaatcattgcacttgccagcgttgatcttcatttcataaatcatgcttattat
agcactttgttgcgaggagcttctgttcagttagttttcggatttgagtatgccattttg
ttaacagttgtactgatgacattaacaaaatatattcttcatgcttttgatcttcaaagt
gaaaatccttgggaaaataaggcagtatatcttctttatacagaattgatcatgggattg
atcaaagtacttttatatgtattatttatggtcattgtaattaaagttcacacattccca
ctttttacgatacggccaatgtacctttctgtgagagcattcaagaaagcactcaatgat
attgtcatgtccagaagagctataagaaatatgaacactttatatccagatgcaacacca
gaagaattgtcttcaggtgataatgtctgtataatatgtagagaagagatggttactgct
tgtaagaaattgccatgtaatcacattttccatgcaagctgtttacgttcttggtttcaa
cgtcaacaaacatgccccacttgtcgtatggatattctccgaattccacggcctcaacca
gcacagcctcaacaagcacaaccacaacaaaatgtcccccagccaccattacagccacca
catccacagtttccacacaacatggtgtttcctggatttccacctatgccgttatgggct
cctaacatgcctccaccaccgccaccacctccaactcagactacatcccaacaacagaca
gtcaaccctgtgtcaacccagaatacttcaaatactactactacaacaaatagtactact
acaacaactactaatactactacaactactaccactactgctactgctgaaccaagtatg
tctgttcctgaaagtcaaggtttccctggaacttctcaaaacaatatgtcatttcttagt
tttcctcctttattctcttcttttgttctacagaatcagtctgtattatctggcctatct
actgaggaattggcaagtttggaaggtcaggaacggtgtaatattgaggcacgaatccaa
tggctcagagatatacaaactttacttgatggtgccatggtacttatgaatcaatataac
caagtggctgcacattcgggaattcaaggaatttctatgttgccaaggaatgttgatcaa
ccaaatacatcttctcataccaaagaccacagtgtatcacagaaccagctgtctaataat
gagtcagcgggaaagccaaatgaaaacactcctaacaaatctgaagatttagattacctt
gatttggaaggtgctacaggtgaaactccaaagaagagttccagttcaccagaagctgaa
cttcgaagaagacgtttgcaacactttatttctcaatccaatgaaaccaagtag
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