Octopus bimaculoides (California two-spot octopus): 106883615
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Entry
106883615 CDS
T04127
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106883615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106883615
03041 Spliceosome [BR:
obi03041
]
106883615
03032 DNA replication proteins [BR:
obi03032
]
106883615
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
106883615
Spliceosome [BR:
obi03041
]
Complex A
U1 snRNP components
Sm proteins
106883615
U2 snRNP components
106883615
Complex B
U1 snRNP components
106883615
U4/U6.U5 tri-snRNP components
106883615
Complex C
U2 snRNP components
106883615
DNA replication proteins [BR:
obi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
106883615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
106883615
NCBI-ProteinID:
XP_014790194
UniProt:
A0A0L8FFZ8
LinkDB
All DBs
Position
1:complement(108413492..108421403)
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AA seq
88 aa
AA seq
DB search
MAATMPINPKPFLNGLTGKPVIIKLKWGMEYKGYLVSIDGYMNLQLANTEEYIDGALAGN
LGEVFLRCNNVLYIRGVEEEDEEGEMKD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgactatgccaattaaccccaaaccatttttaaatggtttgacaggaaaacca
gtcataataaaattaaaatggggcatggaatataaaggttatcttgtatctatagatggc
tacatgaacttacagttggccaacactgaagagtatattgatggtgcattagctggaaat
ttaggagaagtgtttttgagatgcaacaatgttttatatataagaggagtagaggaagaa
gacgaagagggagagatgaaagattga
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