Octopus bimaculoides (California two-spot octopus): 106883713
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Entry
106883713 CDS
T04127
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
obi04812
]
106883713
Cytoskeleton proteins [BR:
obi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
106883713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Katanin_con80
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Ge1_WD40
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
WD_LRWD1
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_2nd
WDR54
Nucleoporin_N
PROPPIN
Beta-prop_WDR11_1st
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
106883713
NCBI-ProteinID:
XP_014790311
LinkDB
All DBs
Position
4:complement(41024747..41079019)
Genome browser
AA seq
582 aa
AA seq
DB search
MAEDQERVFKLPEFAAHAQTINCLALGHKSSVLVTGGEDRKINLWTLCKDGYTAIMSLFG
HVSPIEAVRFDHSEEKVATGTRSGTFKVWDLETLKVQKTFYGHRSGIKSIAFHPTGDFIA
SASTDSSIKLWDIKRKSCIYRYKGHQGSVNNLQFSPDGGWIASAGEDGIVKLWDLKAGKL
LADLKGHKSGVNVVDFHPGELLLASGSSDRTVKFWDLENFHLVSSTPEISHGVDNILFHP
SGSCLFATSANMLRVYGWEPYQCFDEIRTNWGNAASICFTNTQLLAASYMETFVFPYLVF
LQRVKPIMDTSYGNDPKSISSPALDRKKPFSHGTPDTAVVMPHRRESNSSAFELEHRNID
HNHQAANLPRTHFQNNLGEISDQKCNNIISNNREHLKPQSKISPKLLGGGELEAEIFNQI
EKGHSAVIEKLHERSANLMKIEDKWKYDNARAALKLCIDLGDPALVIDMLSVMNSKKDLW
NLDLCTLLSPKLVDLITSPHKRYVETVCGTLKLILETFGPLLKSCLNPAAGIGVDITAEE
RMNKCEVINGNLDQIKVILDKMQVTGQLDDGLKEVQILVETL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaccaggagcgtgtatttaagctaccggaatttgctgcacatgcacagact
ataaattgtcttgcattaggacacaaatcatcggtgttggttactggaggtgaggacaga
aaaatcaatctttggacactttgcaaagatgggtacacagctatcatgagtttatttggt
catgtatcgcccattgaagcagttcggtttgaccactctgaagaaaaagttgctacagga
acacgatctggaacatttaaagtatgggatctagagacactgaaagttcaaaaaacgttt
tatggacacagatctggaattaaaagtattgcttttcatccgaccggagacttcattgca
tcggcctctacagattctagtataaaattatgggacattaaacgaaaaagctgcatatac
agatataagggccaccaaggttcagttaacaatttacagttcagccctgatggtggctgg
attgcttcagcaggggaagatggtatagtaaaattgtgggacttaaaagcaggtaaatta
ttagcagatttgaaaggacataaatctggtgtcaacgtagttgactttcatcctggtgaa
ctattattggcctcaggcagttctgataggactgttaaattttgggatttagaaaatttt
cacttagttagctctactccagaaatatcacatggtgttgacaacatactcttccatcca
tctggttcctgtttatttgctaccagtgcaaacatgctacgtgtgtatggatgggagcca
taccaatgttttgatgaaattcgaactaattggggcaacgcagcatctatttgcttcaca
aacacccagttacttgctgcgtcttatatggaaacttttgtttttccttatcttgttttt
cttcagagagttaaaccaattatggataccagttatggtaatgatccaaagagtatttcc
agtcctgccttagataggaaaaaacctttcagtcacggcaccccagatactgcagttgta
atgccacacagaagagaaagtaactcttcagcctttgagttggaacacaggaatattgac
cataatcaccaagctgcaaacttgcccagaacccatttccaaaacaatcttggagaaata
tctgaccaaaaatgcaacaatattatttcgaacaacagagaacatcttaagcctcagagt
aaaatatccccgaaattattaggtggtggagagttagaagctgagatattcaaccagatt
gaaaaaggtcatagtgctgtaattgagaaactacacgagagaagtgcaaatttaatgaaa
attgaagataaatggaagtacgataatgccagggctgccctaaaactatgcattgatctt
ggagacccagctcttgtgattgatatgttaagtgttatgaatagtaaaaaagatttatgg
aatttagatctgtgtacactactcagtcccaaattagttgacctcatcaccagtccacac
aaacgatatgttgaaactgtatgtggtactctaaagttgatactggaaacatttgggcct
ttactaaaatcttgtctaaatccagctgctggaattggtgttgatatcactgcggaagaa
agaatgaataaatgtgaagtcattaatggaaatctggaccagattaaagtgatcctagac
aaaatgcaggttacgggtcaattagatgatggattaaaagaagttcaaattttggtagag
acactgtga
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