Octopus bimaculoides (California two-spot octopus): 106883893
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Entry
106883893 CDS
T04127
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106883893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obi03000
]
106883893
03021 Transcription machinery [BR:
obi03021
]
106883893
03036 Chromosome and associated proteins [BR:
obi03036
]
106883893
Transcription factors [BR:
obi03000
]
Eukaryotic type
Helix-turn-helix
ARID
106883893
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106883893
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106883893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
ARM_LIN_2nd
Motif
Other DBs
NCBI-GeneID:
106883893
NCBI-ProteinID:
XP_052830163
LinkDB
All DBs
Position
18:complement(38317789..38404629)
Genome browser
AA seq
2560 aa
AA seq
DB search
MENINSEDGLDRAVTTTKLRSPSQVSDSNTMDSFQDGGQQNMNSEQNDYTASLDSTHVNS
ESNNYPQNSGDGGVSSDSYARMNENIHPTQIPGFGMYGRGNYSMGDQHGAMSMPGSSEFS
NQTSQYHGQYLPTHVRPGFPGGPKPGMNPMRPGMGTSGMGMMPPSYNPASTRLMSGQSIS
QQSGPTPTLNQLLQSPNSAQRYPNNYSEYGGSQKVPADMGSVAGYPMQQAWSPHQRGAIN
AFPQTQGAISGCQAFRNQGGGNMNEMPQQRRASGIPNFPQQTSQYNNQQFSPNSQRYMMG
TGQVRSGQMSQPYGQQHQGDLFSYKPGKPRMVDVNKIPGQFVPNQMVFNQSMGVSQVVHQ
QQPTPQQPPQPPGPSPPRHSPQAPLATPPTSTQQQQQQQQQQQQQQQQQQQPTSQSQPSP
QSQQQQSSHTPQPSPLQNQSPQHNQQNSPQNVTRSHGKKSNDDGEGMYPLRCRSQKKKTQ
PVVFVGNKESNNTFDEMSSENTRGSQGTPTPSGSHHPSVSNLRVTPSPAGSAGSRSNTPA
SVTGNQAGSPMPPRPPSSQLDGQGSMSQSQMTGQGFGQHIMPPPVGPNQMYNTANKPMAG
MNAVAASVSQMGGHFSQYNSQFPGSFHRQQNPAGMQNYPQQNVYNGPNQMSSLSGGSLYS
SMPINRNMSSANYNSASYPQSGNMNSQCSNFNSHSSTAVSGGPNVHGGPCSNMPNHSMNS
MQQQQQQQASPLPSHPHPPHPSTGGANTMTMSPSGQCVTPPIVPGVKGAHAAAQAAMIAA
ANTAAATRCHQLRTGSSNQPARMYPPGMAPAGPSSSHIGSMNFSSAINNIPSSSGQFPSS
VSQTTVPNSMTQQSNSCSPTSPSTSSTHSSNTTSANSNRTLDPMKQTPSSLSKEGCLPSN
CASSFSAMIPPTANSGMDGIGIPTQGDSTEEGKAVDENSECNSDGSRIIPPGSLDSSGVV
GPTVSSSMSTRHSSAAGPATSSSVPVSQHVCVSSQAPSSNNLSLEDSHNTTTSTANSSAG
NTATMVTQAITAPVASVVESMSNDSQPDLLSTYSIPPMVNSSSSGNVMSSDEPPEKKKKD
CVSHPPTPTNLSQSPSGTSVSSYPEEIENLNSPTSWSVGTPKPGQTADLHKLYTMGDEPD
RKTFLDRLLYFLEEKGTPITSMPQISKQPLDLYKLYHSVKDRGGMVEVSKAKKWKEICAV
VNIGSSASAAFTLKKNYVRYLFAMECKYDKGGIDPAPILAQMEAAMQQKRESKQRRAPSP
AGSQGSSQDAFRPPSTPNSNSQGMDPFSPNMQSYIGGPNSESNIGPMSSTMMPHGNMMNS
MNPSNSMLAQNSVGGPNSSMLPPHHMSSGPNSMHGNMMPGNMPPSNNMMGNSYAPNNMMP
NNMGPNNNMMANNMATSNNNMLGNNMGPSNNNLSSNMNQAPQNESDSVSVQDPFADEPCA
SGPSYPRQSMNSQMPPYSGMQSQTTMSGNYGFNRQNAQHGMSPYSNMSQQSMNNFSENRI
GQNEQYNDAYRRTMGMENFNNNNRNSENFGPAATQFGPRNSQVSGAQFPFGPQFDRERFE
QPNAANSNQQFRPPSQPGMVTQQQHPEQMYPNRYGSNQQMTSVRSHTPQHDQYAAQGGYP
NQSNTFNSPRGVVPQEQYQNYPNQQAGFAGHRPPSSREVPGGNMYGTPNKRYPPDVERRE
NFNMSGYTNQPNSYPEKPGSAPVMYPQYREAMIPPQDSPMHDSRRDPSQWSAMQQRYGSQ
HSGSNYPGSSMNAMPPGSGMLPPMVPPSPSSTGRTMNPRLSPQRDKPYMSPPRVQKPGGM
VPNAQLPPKKEISFPPDSVEAVQPLLAKRKRLAKQDIGQTEPWKLMMALKSGMLAESTWA
LDTLSILLFDDSTVAYFTLSHLPGLLEVLLEHFRRCLIDIFGLFNELEVGYNTAMLKHKE
KKGAKSKETHMDVDDFKNLESDTVWKGMRTGENYTYITRQGKIVKINENDRDTALLHGKH
WDVYTNFTSKAEHWQLGGGDMTKHVQTHFESLSNHKVLKKFFLYRGMKKNCEDDSINISL
PESNCIMREPAEHASEEVRLLLKSTCQNNKTVNGVVEDNLPNCITKVHIKKEPVEEAEKN
KAATKPTCTPADTEVSTAAAAAAASDRVKEEPRSEENCKNLDSEQKQSESTKNGTEKNCV
NSENHCEKDGVVKKDLESQKVETKVDKDKLVKSEDKKTNSLKNESILSHIENGISIESLL
RKAELCEDPEEEAFERDSPAVCLMSEAQDEIGRRCVCISNIFRSLSCIQGNDSEMSRHPG
LMYILGKLLLLHHQHPPRVKVRRKLDKEETEFEDVSLSEHEWWWDHLHALRENTLVIFAN
ICGQLDLSIYPEDICLPILNGLLHWAVCPSSCAQDPLPSMSPSSVLSPQRLVLEALCKLC
IHEANVDLLLATPPFNRIVQLVNNLTKMLANKKEQVTQEFAVVLLSELVQGDSSAARAIA
MQHPSVSLLIDFLETAEHNAVQVVSTHGINVLRDSPEMMGTSLDMLRRTANILVHLARVP
ENRPCFVHQQSRLLTLVMSQILDQHVAQTLADVLYECSHS
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatattaactctgaagatggattagatcgtgctgttactactacgaagctacga
tcaccgagtcaagtctcagattcgaacacaatggactcttttcaagatggtggccagcaa
aacatgaactcagagcaaaatgattatacagcttctttggactctactcacgtcaattcc
gaatccaacaattatccacagaattcgggagatggaggtgtgagttcagatagttatgca
agaatgaatgaaaatattcatcctacacaaatacctggattcggtatgtacggtagggga
aattacagcatgggagatcaacatggcgctatgtctatgccaggaagttcggagttttca
aaccaaacctcgcaatatcatggacagtatttaccaactcatgttcggcctggatttcct
ggaggtccaaaacctggaatgaatccgatgcgaccaggaatggggacatctggtatggga
atgatgcccccttcatataatcctgcctcgacaagattaatgtctggtcaaagcatatct
caacagagcggaccaacaccgacccttaatcagcttttacaatctccgaattcggctcag
agatatccgaataactactcagaatacggaggttctcaaaaagtccctgctgacatgggc
agtgtggctggttaccctatgcaacaggcatggagtccccatcaacgaggagctataaac
gcgttcccacagactcagggggccatatccggctgccaagctttccgaaatcagggaggt
ggaaatatgaatgaaatgccacaacaaagacgagcctcaggtattcctaattttcctcaa
cagacatctcaatataacaatcaacaattttcacctaattcccaacgttacatgatggga
accggacaggttcgttcaggacaaatgagccagccctatggacaacagcatcaaggtgac
ttgttcagttataaacctggtaaaccacgaatggttgatgttaacaagatacctggtcaa
tttgttcccaatcagatggtcttcaaccaatcaatgggtgtttcacaagtggtgcatcag
caacaacctacaccacaacaaccaccacagcctccagggccctctccaccaagacattct
ccacaagctccactagccactccaccaacatcaactcaacaacaacaacaacaacaacag
cagcagcagcagcagcagcaacagcagcaacaaccaacgtcccagtcccaaccgtcccct
caatcacaacagcaacaaagttcacatactcctcaaccatccccacttcagaatcaatct
cctcagcataatcagcaaaatagtcctcagaatgtaactcgctctcatggtaaaaaaagc
aatgatgacggtgaaggaatgtatccactacggtgtcgttctcagaaaaagaaaactcag
ccagttgtttttgtgggaaacaaggaaagtaacaatacatttgatgaaatgagttctgaa
aatacacgaggatctcaaggtactccaactccatcagggagccatcatcctagtgtttct
aacttgcgggttacaccatcacctgctggctcagctggatctcgatcaaatactccagca
tctgttacaggaaaccaagctggtagtccaatgccccctcgtccaccttctagtcagttg
gatggacaaggttcgatgtcccagtcacaaatgacaggtcaaggcttcggtcagcatatt
atgcctcctccagttggccccaatcagatgtacaacacagccaataaaccaatggcaggg
atgaatgctgtggctgcctcagtttctcagatgggaggtcactttagccagtacaattcc
caatttcctggaagtttccatcgacaacagaaccctgcagggatgcagaattatccccag
caaaatgtgtacaatggacccaaccaaatgagttcgttatctggaggatctttgtatagt
agtatgcccatcaatagaaatatgtcctcagctaactacaatagtgcaagctacccacaa
tctggcaatatgaactcacaatgtagtaattttaacagtcatagtagtactgcagtttcc
ggaggaccaaatgttcatggaggaccctgctccaatatgccaaaccattcgatgaattcc
atgcagcagcagcagcagcaacaagcatcacctcttccctcgcatcctcacccaccccac
ccttcaaccggaggtgccaacaccatgaccatgtcaccaagtggccagtgtgtaacacca
cctattgtacctggagttaaaggtgcacatgcagcagcgcaggcagctatgatagctgct
gctaatactgctgctgccactcgttgtcatcagttacggacaggatcatctaatcagcca
gccagaatgtatcctccaggaatggcacctgctggtccttcatccagtcacattggatca
atgaacttctcttctgccatcaacaatattcctagttcatctggtcagtttccttcttca
gtgtctcaaacaacagtgcctaattctatgactcaacaatcaaattcttgtagcccaact
agtccctcaaccagcagcacacacagtagcaacaccactagtgctaattccaatcgaaca
ttggatccaatgaaacaaactccctcttccttgtctaaagaaggatgtttaccaagtaac
tgtgccagcagttttagtgcgatgattccaccgacagccaactcgggtatggacggcatt
ggaatcccaacccaaggtgatagcacagaggaaggcaaagctgttgacgagaacagtgaa
tgtaacagtgatggcagtcgcatcatcccacctggtagtctagattcatctggtgttgtt
ggaccaactgtttcaagttccatgtcaactcgccatagttctgctgctggcccagctact
tcctcctcagtgcctgtcagccaacatgtgtgcgtgagcagccaggctcctagttcaaat
aatttatccttagaagacagtcacaacacaaccacttctactgcaaattctagtgcagga
aacaccgccacaatggtcactcaggccattacagctcctgttgccagtgttgtggagtct
atgagtaacgatagccaaccagatctactttcaacatacagcatcccaccaatggtgaat
tcaagttcatcaggaaatgtaatgtcttccgatgaaccaccagaaaagaagaaaaaggat
tgtgtttcacatcccccaacaccgaccaatctatcccaatctccaagtggaacaagtgtg
tcctcctatccagaggagatagagaaccttaacagtccgacaagctggtcggtgggcact
ccaaaacctggacagactgccgacttacacaagttatacaccatgggggatgaaccagat
agaaaaacttttctagatcggttattatattttctagaagagaaaggtacacctataaca
tcaatgcctcaaatcagtaaacagcccctcgatctctataaactgtaccacagtgtaaag
gatagaggaggaatggttgaggtaagcaaggctaagaaatggaaagagatctgtgcagtt
gtgaacataggctcttcagcaagtgctgctttcactttaaaaaagaattatgttaggtat
ttatttgcaatggaatgcaaatatgacaaaggaggtatagatccagcaccaatactagca
caaatggaagcagcaatgcaacagaaacgagaaagcaaacagagaagagcaccctcacca
gctggctcccaaggctcttctcaagatgcattccgaccccctagcacacctaacagcaac
agccaaggaatggacccattttctccaaacatgcaatcctatataggaggccccaattct
gaatctaacattggtccaatgagctcaactatgatgcctcacggaaatatgatgaacagt
atgaacccttccaatagcatgctggctcaaaattctgtgggtggtccaaattcaagtatg
ctccctcctcaccatatgtcttctggaccaaacagtatgcatggcaatatgatgccaggg
aacatgcccccttctaataatatgatggggaattcgtatgccccaaacaacatgatgcca
aacaatatgggtccaaataataatatgatggcaaataacatggcaacatcaaataacaac
atgcttggtaacaacatgggaccttctaacaacaatttatcttccaacatgaaccaggca
cctcaaaatgaaagtgacagtgttagtgttcaggacccatttgcagatgagccatgtgcc
agtggcccaagttatcccaggcagagtatgaattcgcagatgccaccctactctggcatg
caatcacagactaccatgtctggtaattatggcttcaatcgtcaaaatgcccagcacgga
atgtcaccatactcaaatatgagccaacagtctatgaacaacttttctgagaaccgaatt
ggtcaaaatgaacagtataatgatgcctatcgaaggacaatgggtatggagaatttcaat
aacaataatagaaattcagaaaattttggtcctgcagctactcaatttggacctcggaat
agtcaagtatcaggtgctcagttcccatttggacctcagtttgaccgtgaacggtttgag
caacctaatgctgcaaattctaatcagcaattccgaccaccatctcaacctggaatggtt
actcaacagcagcatcctgaacaaatgtaccccaatcgatatggcagcaatcagcaaatg
acttcagttcggtcacatactccccaacatgaccagtacgcagcccaaggagggtatcct
aatcagagtaatacttttaatagtccgaggggagtggtaccacaggaacaatatcagaac
tatccgaatcagcaagctggttttgctgggcatcgaccacctagttcacgagaagtccct
ggtggcaatatgtatggaacgccaaataaaagatatccacctgatgttgaaaggcgagag
aatttcaatatgtcaggctacactaatcagcctaactcctaccctgaaaagcctggctct
gctcctgtgatgtatccacaatacagggaggctatgattccaccacaggacagccccatg
cacgattcacgaagggatcctagccagtggtcagctatgcagcagcgctatgggtctcaa
cacagtggatccaactatcctggctccagtatgaatgccatgcctcctggttctggaatg
cttcctccaatggttccccccagcccgagcagcacaggtaggactatgaaccccaggctg
tctccacaaagggataaaccatatatgtcacctcctagggtacagaagcctgggggtatg
gtaccaaatgctcaactcccacccaagaaggaaatatcattcccaccagatagcgtagaa
gctgttcagcccttgctggccaagagaaagcggctagctaaacaagacataggtcaaact
gaaccctggaaacttatgatggcattaaagtctggcatgcttgcagaaagtacttgggct
ttggatacattgtctattcttttatttgatgattcaacagtggcttacttcactttatca
cacttaccagggctacttgaagttttactggaacacttccggcgctgtcttatcgacata
tttggcctgtttaatgaacttgaagttggttacaatactgctatgttaaaacataaagaa
aagaaaggagcaaagtctaaagaaacacatatggatgtagatgatttcaaaaatttggaa
agtgatactgtgtggaaaggtatgcgaacaggagaaaactatacttacattacaaggcaa
gggaaaatagtgaaaatcaatgagaatgatcgagatactgctctattacatgggaaacat
tgggatgtgtacacaaatttcacgagcaaagcagaacattggcagctaggtggtggtgat
atgaccaaacatgttcaaactcactttgaaagtctatctaatcataaagtgttaaagaaa
ttcttcctttaccgtggcatgaaaaaaaattgtgaagatgatagcatcaacattagtttg
cctgaatcaaattgtataatgcgagaacctgctgaacatgcatcggaagaggtgcgtcta
ttattaaaatcaacctgccagaacaacaaaaccgtcaatggggtggttgaggacaattta
ccaaattgcatcacaaaagtccacattaaaaaagaacctgttgaggaggctgagaaaaac
aaagctgctacgaagccaacttgcaccccagctgatactgaagtatccactgctgctgct
gctgctgctgcatctgatcgcgtcaaagaagagcctcggtctgaggagaattgtaaaaat
ctagattctgaacagaaacagagtgaatccacaaaaaatggcactgaaaaaaattgtgta
aatagtgaaaaccattgtgaaaaggatggtgttgtaaaaaaagatttagagtctcaaaaa
gtggaaacaaaagtggataaagataaattagtaaaatctgaagataagaaaactaattcg
cttaaaaatgaatccattttgagccatattgaaaatggaatatcaattgaatccctgtta
aggaaagctgagctgtgtgaagatcctgaagaagaggcctttgagagagatagccctgca
gtatgccttatgtcagaagctcaagatgagattgggcggcggtgtgtatgcatttctaat
atatttcgcagtttgtcgtgtatccagggaaatgactctgaaatgtccagacatcccggt
ctgatgtatattctaggaaaattattattactccatcatcaacacccccctcgggtgaag
gtacggagaaaacttgataaagaagaaacagagtttgaagatgtttccttgtctgaacac
gaatggtggtgggatcatttgcatgcattacgtgagaacacattggttatttttgctaac
atatgtgggcagcttgatctctcaatataccctgaggacatctgtttgcctatattgaat
gggctgcttcactgggctgtctgcccctcctcctgcgcccaggatcccttgccaagcatg
tcaccatcctccgtcctttcgcctcagcgattagtacttgaagcattatgtaaattgtgc
atacatgaagctaatgtggacttgttgcttgcaacaccaccctttaatcggatagtacag
cttgttaataacttgactaaaatgcttgctaataaaaaggagcaagtaactcaggagttt
gcagttgtgttactatcagagcttgtgcagggagacagcagtgctgcccgtgccatagct
atgcagcatccgagtgtatcgttgctgatagactttttagagacagccgaacacaatgct
gtgcaggtagtaagcactcatggtatcaatgtgttaagggacagtccagaaatgatggga
actagtctagatatgttacgacggactgcaaatatactggtacatttagctcgggtgcca
gagaacagaccatgttttgtacaccaacagagcagacttttgactttagttatgtctcaa
atacttgaccagcatgtggcacagactctagctgatgtactttacgagtgttcacactca
tag
DBGET
integrated database retrieval system
