Octopus bimaculoides (California two-spot octopus): 106883905
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Entry
106883905 CDS
T04127
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106883905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obi04147
]
106883905
Membrane trafficking [BR:
obi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106883905
Exosome [BR:
obi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106883905
Exosomal proteins of bladder cancer cells
106883905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
106883905
NCBI-ProteinID:
XP_014790530
UniProt:
A0A0L8I691
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All DBs
Position
17:complement(20358902..20411218)
Genome browser
AA seq
1275 aa
AA seq
DB search
MDQSASDIYFAAEQEVLPCSIHVDIFYNLSRSRELYEEEPVNKAFTDCSPSTMLTKFETK
SARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGICFHFQQPLFVS
GGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTNFHHEYPWIVSASDDQTIRIWNWQSRNCI
CVLTGHSHYVMCAQFHMSEDMVVSASLDQTVRVWDISGLRKKSVAPGPGGLEDRLRNPAQ
TDLFGTTDAIVKHVLEGHDRGVNWAAFHPTMPLIISGADDRQVKLWRMNESKAWEVDTCR
GHYNNVSCCLFHPRQELILSNSEDKTIRVWDMSKRTSVQTFRREHDRFWVIAAHPTLNLF
AAGHDSGMIIFKLERERPAYAVHNNLLYYVKDRYLRKLDFTTSKDTAVMQLRGGSRSVVF
SMSYNPAENAVLICTRTSNVDNSTYDLYGIPKNSDSQNPDAPEGKRSSGLTAVWVARNRF
AVLDRTHSIVIKNLKNEITKKMQTPSCNEIFYAGTGCLLLKDNETVTLFDVQQKRSLASV
KVPKVKYVVWSQDMTHVALLSKHVIAICSRKLENVCTIHENIRVKSGAWEESGVFVYTTS
NHIKYALTNGDHGIIRTLDLPIYISRVKGNSVYCLDRECRPRILGIDPTEFRFKMALVNR
KYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAR
ALDDQACWDKLGEAALLQGNHQVVEMAYQRTKNFDKLSFLYLITGNLDKLKKMMKIAEIR
KDVSGHFQNTLLIGDVHERVKILKNCGQKSLAYLTAATHGMEEEAQSLKESFSEKERVPD
LYPNAKLLRPPVPITQQESNWPLLTVSKGFFEGAMAARGQGGTLAATSEAMDDTSADGWG
VDAELVMDDDFMPAESGLDEDAAGDKEGDGWDVDEELELPADLDLGPVPSMGGEEGYFVP
PTKGTSQTQVWCNNSQLPADHIRAGSFETAMRLLHDQVGMVSFAQYKQLFLQTFAHARTC
YVGIPSLPPLFGHPHRNWKDAGARNGVPAVGLKLATLVQQLQVAYQLTTGGKFGEAIDRF
RTILLSVPLLVVDNKQEIAEAQQLVEICREYIVGLSMEMARKELPKETFEQQKRSCEMAA
YFSHCNLQPIHMILTLRTALNLFFKMKNFHMAASFARRLLELGPKPDVAQQTRRILVACE
KNPVDQHEMKYDQHNPFDICAATYVPIYRGKPVVKCPLSGACYQPEFKGEVCRVTKVTEI
GRDCIGLRISPIQFR
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggaccaatcagcaagcgatatatatttcgctgctgaacaggaagttctgccatgttca
atccacgttgacattttttacaatttatccagaagtcgagagctttacgaagaagaacca
gtcaacaaagcattcaccgattgtagtccctcgactatgctgactaaattcgagactaaa
tccgctagggtgaaaggtttatcctttcacccgaaaaggccatgggttctggcaagtctt
cacaatggtgtgatccaactatgggattatcgcatgtgtaccttaattgacaagtttgat
gaacatgatggtcctgtcagaggaatctgtttccattttcagcaaccattatttgtatct
ggtggagatgattataaaatcaaggtgtggaactataaacagcgccgttgtcttttcact
ttgctgggacatcttgattacatcagaacgaccaacttccatcatgaatatccttggatt
gtcagtgcttcagatgatcaaacgattcgaatctggaattggcaatcaagaaattgcatt
tgtgtcctgacaggtcatagccattatgtaatgtgtgctcagttccatatgagtgaagat
atggttgtctcagcatctctggaccaaactgttagagtctgggatatttcaggtttaaga
aagaagagtgtagctcctggacctggaggcctggaagacagattgagaaatcctgctcaa
acagatctgtttggcaccactgacgccattgttaaacatgttcttgaaggccatgatcgt
ggcgttaactgggctgcgtttcatcctaccatgccgctgatcatttccggtgccgatgac
cgacaagtgaaactttggcgaatgaatgaatccaaggcttgggaagtagatacatgtcgt
ggtcactacaacaatgtctcttgttgcttatttcaccctcgccaagaacttatcctaagt
aattctgaagacaagactatcagagtctgggacatgagtaaacgaaccagtgttcagaca
ttccgaagggaacatgatagattctgggtcattgctgcacatcctaccctcaatttgttt
gcagctggccatgatagtgggatgataattttcaagttggagcgagagcgtcctgcgtat
gctgttcacaacaatctcctgtactatgtgaaagatcgctacttgagaaagcttgacttc
actacatctaaggatacagctgtcatgcaattgagaggaggttctcggagtgttgtcttt
agcatgtcatacaacccagctgaaaatgcagtccttatctgtacgaggaccagtaacgtt
gacaatagtacatatgatttatatggcattccaaaaaattctgattcacaaaatcctgat
gctcccgaaggaaaaaggtcttctggccttactgctgtatgggttgcccgcaaccgtttt
gctgtgctcgatagaacacactcaattgttataaagaatctgaagaatgaaattactaaa
aaaatgcaaactcccagctgtaatgaaatattctatgctggaactggatgtcttcttctc
aaagacaatgaaacggttaccttatttgatgtacaacagaagaggtctttggcatctgtc
aaagttcccaaagttaaatatgttgtctggtcccaagacatgacacatgtagcactgttg
agtaaacacgttattgctatctgcagccgtaaattggaaaatgtgtgcactattcatgag
aacatccgtgttaagagtggagcttgggaagaaagtggtgtgttcgtttacacaaccagc
aatcatattaagtatgctctgaccaacggggatcatggaattattcgcaccctagactta
cccatttacataagccgtgttaaaggaaacagtgtgtactgtttggatcgtgaatgtaga
ccaagaatcctgggtattgatccaactgaatttagatttaagatggcattggtcaatcgc
aaatatgaagaggtgctgcacatggtccgtaatgccaaacttgtcggacaatccataatt
gcctacctgcagaagaaaggctacccagaagtggcactacattttgtcaaagatgaaaaa
accagatttagtcttgctttggaatgtggaaacattgagattgctctggaagcagcacga
gcattagatgaccaagcctgttgggacaagcttggtgaagccgctcttctccaaggtaac
caccaggttgtagagatggcatatcaacgaactaagaactttgataaactctctttcctc
tatttgattactggcaacttagataaactcaagaagatgatgaaaatcgctgaaattcgc
aaggatgttagtggtcacttccaaaatactctacttattggcgatgtccatgaaagggtg
aaaattctgaaaaattgtggccaaaaatccctggcttatttaacagctgctactcatggc
atggaagaggaggcccagagtttgaaagagagtttctcagaaaaagagcgagtacctgac
ttgtatccaaatgctaagcttctacggccaccagttcctataactcaacaagagagcaat
tggcccttactcacagtttctaaaggattctttgaaggtgccatggctgccagaggacaa
ggaggaaccttggcagccacctctgaggctatggatgatactagtgcagatggctgggga
gttgatgctgaacttgttatggatgatgatttcatgcctgctgaatctggtcttgatgaa
gatgctgcaggagataaagaaggagatggttgggatgttgatgaagaacttgaattacct
gctgatttagatcttggtcctgttccttcaatgggaggagaagagggttactttgttccg
ccaactaaaggaaccagtcaaacacaggtttggtgtaataattcccaactgccagcagac
catatacgtgcaggatcatttgaaacagctatgcgacttctccacgatcaagttggtatg
gtcagctttgctcaatacaagcagctgttccttcagacctttgctcatgctagaacctgc
tatgttggtattccatctttaccaccactctttggacatccacaccggaactggaaagac
gctggagcaaggaatggtgtgccagctgttggtttgaagcttgccactttagtacaacag
cttcaagtagcctatcaactgacaacaggaggtaaatttggtgaagcaattgaccgtttc
cgtacaatccttctgagtgtgccactcttggttgttgacaataagcaagaaatagctgag
gcacagcaacttgtagaaatttgcagagaatacattgtgggattgtctatggaaatggca
cggaaagaacttcccaaagaaacatttgagcagcagaaacgcagttgtgagatggctgcg
tacttttcacactgcaacttacagccaatacacatgattctaaccttacgaacagctctc
aaccttttcttcaagatgaaaaatttccacatggctgcatcatttgctcgtaggctttta
gaattgggtccaaaacctgatgttgcacaacagacaagaagaatattagtagcctgtgag
aaaaatcctgttgatcaacatgaaatgaaatatgaccaacataatccctttgacatttgt
gctgcaacatatgtgccaatctacagaggaaaaccagtagtcaaatgccctcttagtgga
gcctgctaccaaccagagtttaaaggagaagtctgtagagttactaaggttaccgaaatt
ggtagagattgcattggacttcgaattagtccaattcaattccgatag
DBGET
integrated database retrieval system
