Octopus bimaculoides (California two-spot octopus): 106884192
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Entry
106884192 CDS
T04127
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X2
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106884192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106884192
03036 Chromosome and associated proteins [BR:
obi03036
]
106884192
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
106884192
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
106884192
RSF complex
106884192
WICH complex
106884192
B-WICH complex
106884192
NORC complex
106884192
BRF complex
106884192
NuRF complex (fruit fly)
106884192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
CHDII_SANT-like
Motif
Other DBs
NCBI-GeneID:
106884192
NCBI-ProteinID:
XP_014790918
UniProt:
A0A0L8I4V3
LinkDB
All DBs
Position
13:8974915..9015215
Genome browser
AA seq
1127 aa
AA seq
DB search
MSESDQENIPQEENMEEGEDDVEAEAEDSEAEEEEEEEAPAEEEDDEEEEEDEAEEQGDD
DDENESDPEYLADGVKPVKALLLKQPPKKNGQDAEAYEEHIQADRSNRFDFLLKQTELFA
HFMSTGGQGGKGPSSPLKMKPGRPRLKKNDEKSKLVAIGDEKKPKTDAVKSDAPEEDEKK
PNADGVKSDAPEEDEKKPTTGDVKTDDPADDHRHRRTEQEEDEELLIESKKSVNVEIRFE
KSPSYVHNGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTIALLGYMKHYRNIH
SPHLVIVPKSTLANWENEFLRWVPSIRAVCLIGDQNQRATFIRDVLMPGEWDVCITSYEM
VIREKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWA
LLNFLLPDVFNSSEDFDAWFNTNNCFGDTQLVDRLHAVLRPFLLRRIKSDVEKRLLPKKE
TKIFIGLSKMQREWYTRILMKDIDVVNGAGKSDKMRLLNILMQLRKCCNHPYLFDGAEPG
PPYTTDKHLVDNCGKMVILDKLLPKLQAQGSRVLVFSQMTRMLDILEDYCIWKQYNYCRL
DGQTPHEDRQVSINDFNAPNSLKFLFMLSTRAGGLGINLATADIVILFDSDWNPQVDLQA
QDRAHRIGQTKQVRVFRLITENTVEERIVERAEMKLRLDNIVIQQGRLLDQNTNKLGKEE
VLQMIRHGANHVFASKDSEITDEDIDAILAKGEKRTLEIQNKMETLGEGTLKTFSLDTHE
SVYKFEGEDYREKQKIGPLGSWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQ
PNVQDFQFFPPRLFELLDKEIYFYRKSIGYKVPKNPDYGADAERIRREEQKRIDEAYPLN
DAEISEKEELLKQGFTNWSKRDFNQFIKANEKYGRDDIENIAHEVEGKTPEEVVEYSTLF
WERCNELQDIERIMAQIERGEAKIQRRISIKKALDVKMNRYRAPFHQLRIQYGTNKGKNY
TEEEDRFLVCMLHKLGFDKENVYDELRTSVRQAPQFRFDWFIKSRTAMELQRRCNTLITL
IERENLELEEKEKQEKKRRGPKPGTPKGQKRKADGTPDGRGRPKKKK
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatcggatcaggagaatataccccaggaggagaatatggaagaaggcgaagat
gatgtagaagctgaagcagaagacagtgaagcagaggaggaagaggaagaagaagcacct
gctgaagaggaagatgatgaagaagaggaagaggacgaagcagaagagcaaggtgacgat
gatgatgagaatgaatctgatccggaatatctggcagatggtgttaaaccagtgaaagca
ctcttactcaagcagccacccaagaagaatggacaagatgctgaagcttacgaagaacac
attcaagccgacaggagtaaccggttcgatttcttgctgaaacaaaccgagctttttgct
cactttatgtcaactggtggccaaggtggaaaaggcccatcgagtccccttaaaatgaaa
cctggccgtccacggctgaagaaaaatgacgagaaaagcaagctggttgccatcggagat
gaaaagaaaccaaagactgatgctgtaaaatcagatgccccagaagaagatgaaaagaaa
cccaacgctgatggtgtaaaatcagacgccccagaagaagatgaaaagaaaccaacgact
ggtgatgtaaaaacagatgacccagcagatgaccatcgtcaccgacgtacagaacaagaa
gaagatgaagaattattgatagaaagcaagaaatcagtcaatgttgaaattagatttgaa
aaatctccatcttatgttcacaatggtgagttgagagattatcaaataagaggattaaac
tggatgatatcactgtatgaacatggtattaatggtattttggctgatgaaatgggtctt
ggaaaaaccttacagactatcgctctgctcggttacatgaaacattatagaaatattcat
tcaccacatttagtaattgtcccaaagtcaactctggcaaactgggaaaatgaattccta
cgttgggtcccttccatccgagctgtctgtttgataggagaccaaaaccagagagccact
tttattcgtgatgtattgatgcccggtgaatgggatgtgtgtattacatcttacgaaatg
gttatcagagagaaagcagttttcaaaaaatttaactggcgctatctcgtgatagacgaa
gcccacagaataaaaaatgaaaaatcgaagctttcagaaattgtgcgtgaatttaaatcc
acaaatcgtctcctgctgactggcaccccactacaaaataacttacatgaactttgggct
ttattgaacttcctgttacctgatgtattcaattcatcagaggactttgatgcttggttc
aacaccaataactgcttcggtgacactcaacttgtggacaggcttcatgctgtactccga
ccctttttactccgacgtattaaatctgacgtcgagaaaagactcttgcctaaaaaggag
accaagattttcattggtctcagtaaaatgcagcgagagtggtataccaggatattgatg
aaagatatcgatgtggtcaacggagctggaaagtccgacaagatgcggctactgaacatt
ttgatgcagctgagaaagtgttgcaatcatccttacttatttgacggagctgaaccaggc
cccccatacacaactgacaaacatttagtagacaattgtggtaaaatggtcatcctcgat
aaactgctgccaaaacttcaggcacaaggatcacgtgtacttgtattcagtcaaatgacg
agaatgttggatatccttgaagattactgtatatggaaacaatacaactattgtcgttta
gatggtcagacaccacatgaagacagacaagtatctatcaacgacttcaatgccccaaac
agtctaaaatttctatttatgttgagtacgagagccggcgggttgggcattaacttggcc
accgctgatattgtcattctttttgactctgactggaatccacaggtcgacttgcaagcc
caggatcgtgctcatcgtattgggcagacaaaacaggttcgagtcttccgattgatcact
gaaaatactgtagaggaacgcattgttgaaagagctgaaatgaagttgcgactggacaat
atagtcattcagcaaggtcgtttattagatcagaatactaacaaacttggcaaagaggag
gtccttcaaatgattcgacatggtgccaaccatgtgtttgcctctaaagacagtgaaatc
actgatgaagacatagacgctattttggctaaaggagagaaaaggactctggagattcaa
aacaaaatggagacccttggtgaaggcaccttaaaaactttctcattagatacacatgaa
agcgtgtataaatttgaaggggaagattaccgcgagaagcaaaagataggtccattaggt
tcttggatcgagcctccgaaacgtgagaggaaagctaactatgctgtcgatgcttacttc
cgagaggctcttcgtgtcagtgaaccaaaggctcctaaggcgccaagacctccaaaacag
cccaatgtacaagatttccagttcttcccaccacggctctttgaacttctagacaaggaa
atctacttctaccgcaaaagcattggctataaagtccctaaaaaccctgactatggtgct
gacgccgagcgaatccgaagagaggaacagaaacgaatcgatgaagcctaccctttgaac
gatgctgaaattagtgagaaagaagaacttctgaagcagggatttacaaattggtcgaaa
agagatttcaatcagtttatcaaagctaatgagaaatatggtcgagacgacattgaaaac
atagctcatgaagtggagggcaaaactccagaagaggtggtggagtattctaccttattt
tgggaacgctgcaatgagctgcaagacattgagcgtatcatggctcaaattgagagaggt
gaagctaagatccaaagaaggattagcattaaaaaggcccttgatgtaaagatgaatcgt
taccgtgctccattccatcaattgcgtatccaatatggcaccaataaagggaaaaattac
accgaagaggaggatcgcttccttgtgtgtatgttgcataagttgggatttgataaagag
aatgtctatgacgaactgcgaacttctgtgaggcaggctcctcagttccgctttgattgg
tttattaaatcacggacagctatggaattacaacgaagatgtaatacattaattactttg
atagaaagagaaaacttggagttggaagagaaagaaaaacaggagaagaaacgacgtgga
ccaaagccagggacaccaaagggtcagaaacggaaagcagatggaactcccgatggcaga
ggcagaccaaagaaaaagaaataa
DBGET
integrated database retrieval system
