Octopus bimaculoides (California two-spot octopus): 106884287
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Entry
106884287 CDS
T04127
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106884287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obi03021
]
106884287
03036 Chromosome and associated proteins [BR:
obi03036
]
106884287
Transcription machinery [BR:
obi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106884287
Coactivators
SAGA/TFTC/STAGA complex
106884287
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106884287
STAGA complex
106884287
TFTC complex
106884287
SAGA complex
106884287
SLIK complex
106884287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
CFAP251_N
DSE1_N
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Aladin
PAC11
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR41
ASA1
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_NOL10_N
WD_LRWD1
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF12
PEP5_VPS11_N
Beta-prop_WDR19_1st
Tricorn_2nd
RMC1_N
PROPPIN
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
106884287
NCBI-ProteinID:
XP_014791075
UniProt:
A0A0L8I3X4
LinkDB
All DBs
Position
24:complement(32260147..32280883)
Genome browser
AA seq
599 aa
AA seq
DB search
MSVEWNSFDFLQYLKMKRIKNEQIQMSMSNYLKRRQYPESSIPGKRNHQYIQEPSELVSQ
NNVHHLSTINNVLAYSSITGDATACDHQFSQLKQFICDAVEPYRTELHILLFPIFVHVYL
EMLYNGHKSPAHKFHARHVTFFREDPENQDILDTLVKLNNREDVLTCKLVAEFRDHKYSL
AFTQDTFDYLVRFLKADDNMIMLQIFNKHLKVEVKTDKCPVFECKPQNLQSEVNCKSADP
HLPALTSANADKNPATDQVTKEMLLECIKSLQVLPPCLPSICFLAIATAHHSLSCASVSD
DRKYVAGGFEDSSIRLWTLGGSIVRTPPSKMNPSRITLSADSLIYKDRDNVNNHYDDWSA
APDQCVVLRGHSGSIYNMCFLPDPDPVYLLSCSKDTTVRLWNLENCCNTVRYAGHNYPVW
DIDVCRVSSMFVSGSCDRTAKLWSTDRIFPVRTFAGHTLDVSRVKFHPNGMYVATGSSDR
SVRLWSINDGKCVRLMQGHRGTVLAMAFSPNGQYLATSGDDKKIRIWDLNTGNLFKEFRG
HVDTVYSLTFCRDGSMLASGGLDSSIRIWDVRKEGDFSNARKFKRWHGEFKQGHALSKS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgagtggaacagtttcgactttcttcagtatttgaagatgaaaaggattaaa
aatgaacaaattcaaatgtcgatgagcaattatttaaagagacgacagtatccggagagc
tccattccaggcaagaggaatcaccaatacatccaagaaccctctgaattggtgtcccag
aataatgtccaccatctctcgacaataaacaacgtgctagcctacagtagcatcacagga
gatgcaacagcatgtgaccatcagttctcgcaattgaaacagtttatctgtgatgcagta
gaaccgtaccgaacagagctacacatcctgctcttcccaatatttgtacatgtctaccta
gagatgctctacaatggtcacaaaagtccagctcacaaattccatgcccgtcacgtgact
ttcttccgtgaagatcccgagaatcaagacatcttggatactttggttaaactgaacaac
cgagaagatgttctcacatgcaagttggttgcagagttcagggatcacaaatactcgtta
gccttcactcaggacacatttgattatttggtccggtttttaaaggctgatgataacatg
atcatgttacagatatttaataaacatctaaaagttgaagtgaaaaccgataaatgtcca
gtgtttgaatgcaagccacaaaatctgcagtcagaggtcaactgcaagtcagctgaccct
cacctgccggcattgaccagtgctaatgcggacaagaatccagccactgaccaagtcact
aaagagatgctactggagtgtataaagagcttacaagtcttaccgccatgcctgccttcc
atatgttttctagcgattgcaacagctcatcacagtctctcctgtgcatctgtctcagac
gaccggaagtatgtggcgggaggttttgaggactcatccattcggctctggacccttgga
ggttccatagtaaggaccccaccttcaaagatgaacccttcgcgaatcacactctctgcc
gattcccttatttacaaggatagagacaacgtcaataaccattacgatgactggtcagca
gcaccagaccaatgtgttgttcttcgaggtcattctgggagtatctataatatgtgtttt
ctaccagacccagaccccgtctacctactctcctgttctaaagatacaacagttcgttta
tggaacctagaaaactgctgtaacaccgttcgttatgctggtcataattatcctgtctgg
gacattgatgtatgtcgagtgagcagtatgtttgtaagtggttcatgtgatcgcactgcc
aaactgtggtcaacggatcgaatcttccctgtgcgtacctttgccggacacacattggac
gtcagccgagtaaagtttcatccgaatggtatgtacgtagctactggttcaagtgatagg
agtgtccgactctggagtatcaatgacggcaagtgtgtccgactaatgcagggtcatcga
ggaacggtacttgccatggcattttctcctaacgggcaatatttggccacctctggggat
gacaagaaaatccgaatctgggatctgaacactggtaatttgttcaaagagttccgtggc
catgtagatacggtctattctttgactttttgtcgcgatggttctatgttagcatcaggt
ggtcttgattcctcaatacgtatatgggatgtccgcaaagaaggtgacttcagcaatgcc
agaaaattcaagcgatggcatggtgaattcaagcagggacatgcactgagcaaaagctag
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integrated database retrieval system
