Entry |
|
Symbol |
polA
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
obj Dysosmobacter welbionis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:obj00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EIO64_14380 (polA)
03410 Base excision repair
EIO64_14380 (polA)
03420 Nucleotide excision repair
EIO64_14380 (polA)
03440 Homologous recombination
EIO64_14380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:obj03032]
EIO64_14380 (polA)
03400 DNA repair and recombination proteins [BR:obj03400]
EIO64_14380 (polA)
Enzymes [BR:obj01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EIO64_14380 (polA)
DNA replication proteins [BR:obj03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EIO64_14380 (polA)
DNA repair and recombination proteins [BR:obj03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EIO64_14380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EIO64_14380 (polA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2820523..2823171
|
AA seq |
882 aa
MKLMVIDGNSILNRAYYGIRPLTTRDGLYTHAIFGFLTTLLRLEGEEAPDALCVTFDVHA
PTFRHQASEAYKATRKPMPEELRVQVPVLKEVLDALNIPRYEQEGWEADDLIGTISRKCE
ADGWDCVVVTGDKDSLQLITDHTMVKLVSTRMGQTTTKDMTETAFQEQYGFAPIHMIDLK
ALMGDSSDNIPGVPGIGEKTAMALIQQYESIDNLYAKMPDIEAKPAAIRKLAEGEESARE
SYWLATIVTDAPLDFHPEENLCRKPGPDAYPLFLKLEFTKLIEKFGLSPAEQPAAERADF
TMTVEQVTEPAQTERLLALWRAADHVSVLALPDLTGLSVVCRTGADTGVTAELFFDKYQG
DWNALLNALFAADVRKVSHNVKDLTRTLLENGLRAEGFVFDTALAAYLLDATAGSYDLAR
LFVAYFNEELPKALYLEPDAFSLLGDAAAAEASFDSYAAAVDSLYGALAERLAERGQMDL
LHEIEMPLCAVLAEMETAGCRVDAKALGAFGDLLARRSAELEQQIYAMAGEEFNINSPKQ
LGEILFGKLGLPHGKKTKTGWSTNADVLEKLRYEAPIVGAVLEYRQYAKLKSTYADGLLK
AMDPDGRVRTSFQMTVTATGRLSSTEPNLQNIPTRTDLGSEIRRMFIPAEGCVLVDADYS
QIELRLLAHMAGDEAMIAAFRSGGDFHAETAAKVFHVAPDQVTHEMRRQAKAVNFGIVYG
ISAFSLSQDIGVSVAEAKAYMEAYFATFPGVRTYMDAIVERAREQGYVETLFHRRRDLPE
LKSSNFNLRSFGERVALNMPIQGTAADIMKLAMVAVRKRLRQELPEARLVLQVHDELIVE
CPEAQAETAAALLKEEMENVVSLSVPLTADAHWGRNWLEAKG |
NT seq |
2649 nt +upstreamnt +downstreamnt
atgaagctcatggtcatcgacggcaacagcatcctgaatcgggcctattacggcatccgt
cctctcaccacacgggacgggctttacacccacgccatcttcggatttctcaccacgctc
cttcgactggagggggaggaggcaccggacgcgttgtgcgtcaccttcgacgtccacgct
ccaaccttccgccatcaggcgtcggaggcctacaaggccacccgcaagcccatgccggag
gagctccgggtccaggtgccggtgctgaaagaggtgctggacgccctgaacattccccgt
tatgagcaggagggctgggaggccgatgacctgatcggcaccatctcccgcaagtgcgag
gcggacggctgggactgcgtggtggtcaccggcgacaaggacagcctgcagctcattacc
gaccacaccatggtgaagctggtgtccacccgcatggggcagaccaccaccaaggatatg
acggagaccgccttccaagagcagtacggcttcgcccccatccacatgatcgacctgaag
gccctgatgggggacagctccgacaacatccccggcgtccccggcatcggggagaagacc
gccatggccctgatccagcagtacgagagcatcgacaacctgtacgccaaaatgccggac
atcgaggccaagcctgccgccatccgcaagctggcggagggggaggagagcgcccgggag
tcttactggctggccaccatcgttaccgacgcgcctctggacttccatcccgaggagaac
ctgtgccggaagcccggcccggacgcctacccgctgtttttgaagctggagttcaccaag
ctgatcgagaagttcggcctgtccccggcggagcagccagcggcggaaagggcggacttc
accatgaccgtggagcaggtcacagagcctgctcagacggagcggctgctggccctctgg
cgagcggcggaccatgtatcggtgctggccctgccggacctgacgggcctctctgtggtc
tgccggaccggggcggacaccggcgtcacggcggagctgttcttcgacaagtatcagggg
gactggaacgcccttttgaacgccctgttcgcggcggacgtccgcaaggtctcccacaat
gtcaaggacctgacgcggacgctgctggaaaacggcctgcgggcggagggcttcgtcttc
gacaccgccctggctgcctacctgctggacgccacggcggggagctatgaccttgcccgc
ctgttcgtcgcctatttcaacgaggagctgccaaaggccctctacctggaaccggacgcc
ttctccctgctgggggacgccgccgcggcggaggccagcttcgacagctacgccgccgcc
gtggactccctgtacggcgccctggcggaaagactggcggagcggggccagatggacctg
ctgcatgagatcgagatgcccctctgcgccgtgctggcggagatggagaccgccggatgc
agggtagacgccaaggccctcggtgctttcggggatctgctggcccggcggagcgccgag
ctggaacagcagatctacgccatggcgggggaggaattcaacatcaactcccccaagcag
ctgggggagatcctcttcggcaagctgggcctgccccatggcaaaaagaccaagaccggc
tggtccaccaacgccgatgtgctggaaaagctccggtacgaggcccccatcgtgggggcg
gtgctggagtatcgccagtacgccaagctgaaatccacctatgccgacggccttttgaag
gccatggacccggacggccgggtgcggaccagcttccagatgacggtgacggccacgggc
cgcctctcctccacagagcctaatctccagaacatccccacccgcacggacctgggcagc
gagatccggcggatgttcatcccggcggagggctgcgtcctagtggacgccgactactcc
cagatcgagctgcggctgctggcccacatggctggggacgaggccatgatcgccgccttc
cgctccggcggggacttccacgcggagacggcggccaaggtgttccacgtggcgccggac
caggtaactcatgagatgcgccgccaggccaaggcagtgaacttcggcatcgtctacggc
atctccgccttctctctgagccaggacatcggcgtgagcgtggcggaggccaaggcgtat
atggaggcctacttcgccaccttcccaggcgtccggacgtatatggacgccattgtggag
cgggccagggagcagggctatgtggagacgctgttccaccggcggcgggacctgccggag
ctgaagtcctccaacttcaacctccgctccttcggggagcgagtggccctgaacatgccc
atccagggcaccgcggcggacatcatgaagctggctatggtggcggtgcggaaacgcctg
cggcaggaactgccggaggcccgtctggtgctgcaagtccacgacgagctgatcgtggag
tgcccggaggcccaggcggagaccgccgcggcgctgctgaaggaggagatggagaacgtg
gtgtccctctccgtccccctaacggcggacgcccactggggcagaaactggctggaggcc
aagggctga |