Dysosmobacter welbionis: EIO64_15700
Help
Entry
EIO64_15700 CDS
T06030
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
obj
Dysosmobacter welbionis
Pathway
obj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
obj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EIO64_15700 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obj03021
]
EIO64_15700 (rpoC)
03400 DNA repair and recombination proteins [BR:
obj03400
]
EIO64_15700 (rpoC)
Enzymes [BR:
obj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EIO64_15700 (rpoC)
Transcription machinery [BR:
obj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EIO64_15700 (rpoC)
DNA repair and recombination proteins [BR:
obj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EIO64_15700 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ApbA_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QCI60466
UniProt:
A0A4D7AXG1
LinkDB
All DBs
Position
3084323..3088108
Genome browser
AA seq
1261 aa
AA seq
DB search
MIDNNTGNNIAFDAIKIGMASPEQIRAWSYGEVKKPETINYRTLKPERDGLFCERIFGPT
KDWECHCGKYKKIRYKGKICDRCGVEVTRAKVRRERMGHIELATPVSHIWYFKGIPSRMG
LLLDISPRILEKVLYFANYIVTDPGETPLTKNQILSEKEYRDYREKYEDDFQAGMGAEAV
KKLLQDVDLEALSAQLHAELKDASGQKKARIVKRLEVVDAFRLSGNKPEWMVIDVLPVIP
PELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIQLNAPDIIVRNEKRMLQEAVDAL
IDNGRRGRAVTGANNRALKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKIYQC
GVPKEMAVELFRPFIMKKLVEDGTANNIKSAKKMVDKGVTEVWDALDVIIKDHPVMLNRA
PTLHRLGIQAFEPVLVDGRALKLHPLNCTAFNADFDGDQMAIHVPLSAEAQAEARILMLS
ANNLLRPQDGGPVTVPTQDMVLGSYYLTMDRMGKAEKGAETIWCEDAGDTNLTAHSIVDA
DDFVAANDALEKGQKKAAYRPLHFYASEEEALMAYNDHVIGPHCPIGVRRTMTVDGVSHT
AVVESTPGRIIFNQNIPQDLGFVDRTDPAHVCDYEVTFTCGKKQLGQIVDRTINKHGFTV
AAEVLDAIKATGYKHSTLAAITVSIADMTVPPKKYELVAASEQKVLDIENQYKMGFMTEH
ERYKQVVQVWEKTTNDVSDALQKNLDRYNPIFMMADSGARGSMKQIRQLAGMRGLIANTA
GRTIEIPIKANYREGLTALEYFISSRGARKGLADTALRTADSGYLTRRMVDVSQDVIIRE
EDCHVTHGIKVSEISENGQVIEKFSDRLRGRFLVGDVVDADTGEVLLSSTKMMDENDAKI
LETHKWVQANYRDGDRCTFDPAVDEHPTVMIRTVLTCKAHSGVCAKCYGMNLATQQPVGP
GEAVGIIAAQSIGEPGTQLTMRTFHTGGLAGGDITQGLPRVEELFEARKPKRMATLAEIG
GTVKFEETSKGSLVNIVITAPDGDTRTYAVPHTGLLVKDGDVIEAGHQLTYGALNPHEVL
RIRGADAVYNYLIQEVLRVYRQQGVDINDKHIEIIVRQMMRKVRLEDAGDTKLLDGSMVD
VLELDDANEEIDRRNAAGERQENGEPLRHAVGTQLLMGITKASLATDSFLSAASFQETTK
VLTEAAIKGKADHLVGLKENVIIGKLIPAGTGLTAYHTFAEELVPGPAPVEAAPEPIPAE
L
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacaacaacactggcaacaacattgcctttgacgcgattaagatcggcatggcc
tctccggagcagatccgcgcctggtcctatggcgaggtgaaaaagccggagaccatcaac
taccgcaccctgaagccggagcgggacggcctgttctgcgagcgcatcttcggacccacc
aaggactgggagtgccactgcggcaagtacaagaagatccgctacaagggcaagatctgc
gaccgctgcggcgtcgaagtcacccgggccaaggtccgccgggagcgcatgggccacatc
gagctggccacccccgtctcccacatctggtatttcaagggcatcccctcccggatgggt
ctgctgctggacatcagcccccggatcctggaaaaggtgctgtatttcgccaactatatc
gtcaccgaccccggtgagactccgctgaccaagaatcagatcctctccgagaaggagtac
cgggattaccgtgagaagtatgaggacgacttccaggccggcatgggcgccgaagccgtg
aagaagctgctccaggacgtggacctggaggccctctccgcccagctccacgcagagctg
aaggatgcctccggccagaagaaggcccggatcgtcaagcggctggaggtggtggacgcc
ttccgtctgtccggcaacaagccggagtggatggtcatcgacgtgctgcctgttatcccg
ccggagctgcgccccatggtgcagctggacggcggccggttcgccacgtccgacctgaac
gacctgtaccgccgggtcatcaaccggaacaaccgactgaagcggctgatccagctgaac
gccccagatatcatcgtccgcaatgagaagcggatgctccaggaggctgtggacgccctg
atcgacaacggccgccggggccgcgccgtcaccggcgccaacaaccgggcgctgaagtcc
ctcagcgatctgttaaagggcaagcaggggcggttccgccagaacctgctgggcaagcgc
gtggactactccggccgttccgttatcgtggtcggccccgagctgaaaatctatcagtgc
ggcgtgcccaaggagatggccgtggagctgttccgtcccttcatcatgaaaaagctggtg
gaggacggcactgccaacaacatcaagtccgccaagaagatggtggacaagggcgtcacc
gaggtgtgggacgctctggatgtcatcatcaaggaccaccccgtcatgctgaaccgcgct
ccgacgctgcaccgtctgggcatccaggccttcgagccggtgctggtggacggccgggcc
ttgaagctgcaccccctgaactgcaccgccttcaacgcggacttcgacggcgaccagatg
gccattcacgtgcccctgtcggccgaggcccaggcggaggcccgcatcctgatgctctcc
gccaacaacctgctgcgtccccaggacggcggccctgtcaccgtgcctacccaggacatg
gtgctgggctcctactacctgaccatggaccgcatgggcaaggcggagaagggcgccgag
accatctggtgcgaggatgccggcgacaccaacctcaccgctcactccatcgtggacgcg
gatgactttgtggccgccaacgacgccctggagaaggggcagaagaaggccgcctaccgc
cctctccacttctacgccagcgaggaagaggccctcatggcctacaacgaccatgtgatt
gggccccactgccccatcggcgtgcgccgcaccatgaccgtggacggcgtcagccacacc
gctgtggtagagtccacccccggccgtatcatcttcaaccagaacatccctcaggacctg
ggctttgtggaccggaccgatcccgcccacgtctgcgactatgaggtgaccttcacctgc
ggcaagaagcagctgggccagatcgtagaccgcaccatcaacaagcacggcttcaccgtg
gccgctgaggtgctggacgccatcaaggccaccggctacaagcactccaccctggcggcc
atcacggtctccatcgcggatatgaccgtgccccccaagaagtacgagctggtggcggcc
tccgagcagaaggtgctggacattgagaaccagtacaagatgggcttcatgaccgagcac
gagcgctacaagcaggtggtgcaggtgtgggagaagaccaccaacgatgtctctgacgcc
ctgcagaagaacctggaccgctataaccccattttcatgatggcggactccggcgcccgc
ggttctatgaagcagatccgccagctggctggtatgcgtggcctgatcgccaacaccgcc
ggccgcaccatcgagatccccatcaaggcgaactaccgcgagggcctgaccgccctggag
tacttcatctcctccagaggcgcccggaagggcctggccgacacggctctgcgtaccgca
gactccggttacctgacccgccgcatggtggacgtctcccaggatgtcatcatccgggag
gaggactgccacgtgacccacggcatcaaggtctccgagatcagcgagaacggccaggtg
atcgagaagttctccgaccggctccggggccgtttcctggtgggcgatgtggtggacgcc
gataccggcgaggtgctgctgtccagcaccaagatgatggacgagaacgacgccaagatc
ctggagacccacaagtgggtccaggccaactaccgcgacggcgaccgctgcaccttcgac
ccggcggttgacgagcaccccaccgtcatgatccgcaccgtgctgacctgcaaggcccac
agcggcgtgtgcgccaagtgctacggcatgaacctggccacccagcagcctgtgggtccg
ggcgaggcggtcggcatcattgccgcccagtccatcggcgaacccggcacccagctgacc
atgcgtaccttccacaccggcggtctggccggcggcgacatcacccagggtcttccccgt
gtcgaggaactgtttgaggcccgtaagcccaagcggatggctactctggcagagatcggc
ggcacggtcaagttcgaagagaccagcaagggcagcctggtgaacatcgtcatcaccgca
cctgacggggacacccgcacctacgcggtgcctcacaccggcctgctggtgaaggacggc
gacgtgatcgaggccggccaccagctgacctacggtgcgttgaatccccacgaggtgctg
cgcatccgcggcgctgacgccgtgtacaactacctgatccaagaggtcctgcgggtgtac
cgccagcagggagtggatatcaacgataagcatatcgagatcatcgtccgccagatgatg
cgcaaggtccgtctggaggacgccggcgacaccaagctgctggacggctctatggtggac
gtcctggagctggacgacgccaacgaggagatcgaccgccgcaacgccgccggtgagcgg
caggagaacggcgagcctctgcgccacgccgtaggcacccagctgctgatgggcatcacg
aaggcatctctcgccacggactccttcctgtccgccgcctccttccaggagaccaccaag
gtcctgacggaggccgccatcaagggcaaggccgaccatctggtgggcctgaaggagaat
gtcatcatcggcaagctgatccctgccggcacgggcctgacggcctaccacacctttgct
gaggagttggttcccggcccggcgcctgttgaggccgccccggagcccattcccgcagag
ctgtga
DBGET
integrated database retrieval system
