Dysosmobacter welbionis: EIO64_17275
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Entry
EIO64_17275 CDS
T06030
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
obj
Dysosmobacter welbionis
Pathway
obj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
obj00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EIO64_17275 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obj03021
]
EIO64_17275 (rpoD)
Transcription machinery [BR:
obj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EIO64_17275 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
UCP026610
Motif
Other DBs
NCBI-ProteinID:
QCI60741
UniProt:
A0A856I3M4
LinkDB
All DBs
Position
complement(3383895..3385184)
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AA seq
429 aa
AA seq
DB search
MTDEEARKAGILRLDDKQVAALPAASWLMNNEKLRELLARGKKKGKLDSADLMDAVDDLN
LESDQMDQLYDSLEALNIDISADDALLADLPDDEPAAEEIADVEEEELVDPNTLVNSFSI
DDPVRMYLKEIGKVPLLSPDEEIDLAQAMGAGNEADRKLAEIDRLRKEGQEIPYSQEEIA
AWKSAHAKGETAKQKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYTK
GYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKVIRVSRQLLQELGHDPSPNEI
SAEMGMPVEKVREILKIAQEPVSLETPIGEEEDSHLGDFIPDEGASEPSEAASFTLLKEQ
LMDVLSTLTPREEKVLKLRFGIEDGRTRTLEEVGKEFNVTRERIRQIEAKALRKLRHPSR
SKKLKDFLN
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgaggaggcccggaaggccggcatcctccggctggacgacaagcaggtggct
gcgctgcccgcagcctcctggctgatgaacaacgaaaaactgcgggaactgctggcccgc
ggtaagaagaagggcaagttggactccgcagatctgatggacgcggtggatgacctgaat
ctggagagcgatcagatggatcagctctacgactccctggaggcgctgaacatcgacatc
agcgccgacgatgccctgttggcggacctgccggatgacgagcccgccgcagaggagatc
gccgatgtggaggaagaggagctggtggatcccaacactctggtgaacagcttctccatc
gacgatcctgtccgtatgtatctgaaagagatcggcaaggtgcccctgttgtccccggat
gaggagatcgacctggcccaggccatgggcgcgggcaacgaggccgaccggaagctggcg
gagatcgaccggctccggaaggaggggcaggagatcccctactcccaggaggagatcgcc
gcctggaagtccgcccacgccaagggtgagaccgccaagcagaagctggcggaggccaac
ctccgcctggtggtgtccatcgccaagcggtacgtgggcaggggcatgctgttcctggat
ctgatccaggagggcaatctgggcctgatcaaggcggtggagaagttcgactacaccaag
ggctacaagttctccacctacgctacctggtggatccggcaggccatcacccgggccatc
gccgaccaggcccgcaccatccgcatccctgtccacatggtggagaccatcaacaaggtg
attcgggtcagccgccagctcctgcaggagctgggccatgatccgtctcccaatgagatc
agcgcggagatgggaatgccggtggagaaggtccgggagatcctgaaaattgcccaggag
cccgtctccctggagacccccatcggtgaggaggaggactcccacctgggcgacttcatc
cccgacgagggggccagtgagcccagcgaagccgccagcttcaccctgctgaaggagcag
ctgatggatgttctctccactctcactccccgggaggaaaaggttctaaagctccgcttc
ggcatcgaggacggccgcacccgcaccctggaggaagtgggcaaggaattcaacgttacc
cgggagcgcatccgccagatcgaggccaaggccctgcggaaactgcgccaccccagccgc
agcaaaaagctgaaggattttctgaactga
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