Ooceraea biroi (clonal raider ant): 105274452
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Entry
105274452 CDS
T05778
Name
(RefSeq) ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obo03032
]
105274452
03400 DNA repair and recombination proteins [BR:
obo03400
]
105274452
Enzymes [BR:
obo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105274452
DNA replication proteins [BR:
obo03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105274452
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
105274452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
Drc1-Sld2
Motif
Other DBs
NCBI-GeneID:
105274452
NCBI-ProteinID:
XP_011328895
LinkDB
All DBs
Position
11:2329910..2336504
Genome browser
AA seq
1542 aa
AA seq
DB search
MDVLKDPVLKTKYLKNKLRVKQWESDFMEKFGRKPNKNDIKDADVSIKEAYKMYWKLKTR
ALEETLMDITFCDDVQGNVTNKSPLKSSTNDQRQDKNSSPEKLARDTENIDPHNSKHESE
AAVQADTVNIEGVWGEHLHKSKEQAPKKKQSLLIGRSSSFQLSRNKFESSSFTKRNPRKS
LSSTKLKNKSGKNMPSNSSIDQADMDSKDGFDVTTEETKPIFGAPVKVTFENNKSVPHCI
NAVQQLVDGHMTSVNRNLNPGWLDRCTRYSNSEVASFNPSQRLSGTSDSGIESMESSTYS
PKDMTPVVNSITSLQESDEDDFVCNSDSEEERRNKRIRNFKKRWSDQDGQLAKRRCVEIE
PVATARSADTTDGGAFKQISNANTNSSVVYNNSCSSRSKTDDVNAFKSVNDISTNFSLAK
EPIKAQQNDKVASSSNIDSKAIIDGGMMSKNVQTDNGQTKNEFKITDSVPKSTDISNQES
GTSSNEKLVKQHVPHRRGKDVLSDDSDPDYVEQKKQTRTKTKKTTVRTVKKSTSRRKRND
EGKPNLRRSSRAKLTLNVDDEERSSDETQAGKFPIYSVETLQTVPRFAMTSTENGDLVTQ
FSKSVSIEMPERGASVSSKTSAKLTDREKLEKKIAAGTMNDNFVRINLKKKVFVRGKKNF
NLSKYKKNQWKQRKKDLASSESNLDAADLIDKNGMTCFKCGESGHFAKNCSASKSDALLP
LEEIDESSSYPTLEEAERMANENAVVAHGHRIDRLPEKPSHSVAKASQSDEAEDMARLFE
DDFETPYEKSETPIVGHKIPQDLLSKLLPPQMDVVEPLYPTNEDGSLTETPAEVFEALHM
FGHESFRAGQEKAVMRILSGQSTLVTLSTGSGKSLCYQLPAYLYSRHSRCITLVISPLVS
LMDDQVTGVPSFLSAACLHTSQTPKVREQVMRSVKDGTVNILLVSPEAVVAGEKSTGFGA
LLRQLPPIAFACIDEAHCISQWSHNFRPSYLMVCRVLKEKLRVKTVLGLTATATRATAES
IVNHLYLHDGMAGVISDVPLPKNLVLTVSKDENKDQALIALLKSERFQKCDSVIVYCTRR
EECARVAGLLRIALQDPRNPEKPNAKVSTIAEAYHAGMTAHRRKIVQKEFMSGKIKIVVA
TVAFGMGINKSDIRAVIHYNMPGTFEGYVQEVGRCGRDGLTGHCHLFLNPLRDSDKWELR
RHIHANGVDRHTIRHLLQRIFIPCSCARINKEKAPDQRCPGHEVALPIDETVQALDITEE
TISTLLCYLELHPKRFITVLSSVYVRARISSYNGPQALKRAAQSSPPLAMAIALDMQKGI
SHEKSNIIEFPIIDVASAIGWDSGVVKSHLKNLEWTTGGDGSVKRSAISMHYDKLGLRVK
TPGDLTDTELDEALDALIARTRSQESSCLQQLEIISSALSKISVPSIEHCSVLNDNVTKR
SEELKGTIRDYFQSDSPLASVDINFQDKIANEQQIAADVRSLVMCYRDTKFTGRAVARIF
HGIQSPNYPAVIWGKCRFWRAYLAADFNAIYRIATREILALR
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgctaaaggatcccgtcttgaaaacgaagtatctgaagaacaaactccgcgtg
aagcaatgggagagcgattttatggagaaattcggacgcaaaccgaacaaaaatgacata
aaggatgcggacgtatcgatcaaagaggcatacaagatgtactggaaactgaagacgcga
gcgctcgaggagactctgatggacatcactttctgtgacgacgtgcaaggcaacgtgacg
aacaagtcgccattaaagtcatcgacgaatgatcagaggcaggataagaactcgagtccg
gagaaactcgcaagagacacagagaacatagatcctcacaacagcaaacacgaaagcgaa
gccgctgttcaagcagacacggtgaacatcgagggagtctggggcgagcatctgcacaag
agcaaggaacaggcgccgaagaagaagcaatccctgttgatcggtaggtcctcctccttc
caactatccaggaataaatttgaaagttcgtcgttcaccaagcggaacccgaggaaatcg
ctatcgtcgactaagctgaagaacaagtctggcaagaatatgcctagtaactcgagcatc
gaccaagcagatatggacagcaaggatggtttcgacgtgacaacggaagagacaaaaccc
atatttggtgcaccagtgaaagtgacctttgaaaataacaaatccgtcccgcattgtatt
aacgctgttcaacaactggttgatggccacatgactagcgtcaaccgtaatctgaatccg
ggctggcttgatcgctgcacgagatacagcaactcggaagtggcgtctttcaacccgagt
caaagactctcgggcaccagcgactccggaatagagtctatggagtccagtacgtattcc
ccaaaggacatgacgcctgtggtgaactctatcacgtcccttcaagagtctgacgaggac
gatttcgtgtgcaacagcgattccgaggaggagcgcaggaacaaacgcatcagaaatttc
aagaaacgatggagcgaccaagacggtcaactcgcgaaacgacggtgcgttgaaatcgaa
cccgttgcgaccgctcggtctgctgatacaaccgacggcggtgcattcaagcagatttcc
aacgctaatacgaattctagtgtagtatataacaatagttgtagtagtagaagcaaaact
gacgatgttaacgcgtttaagtcagttaacgatattagtacgaactttagtttagcgaaa
gagccgattaaggctcaacaaaacgacaaagtcgcctcgagttcaaacattgattcgaaa
gctattattgacggcggaatgatgtccaaaaatgtccagactgataacggtcagacgaag
aatgaattcaagataacggatagcgttcctaaatcgactgatatttcgaatcaagaatca
ggaacttcatctaatgaaaaactagtgaagcaacatgtgccacatcgaagaggtaaagat
gtactatcggacgactctgatcccgattatgtggaacagaaaaaacaaactagaacaaaa
acaaagaagactaccgtccgaactgttaaaaaatctacaagtagaaggaagagaaacgac
gaggggaaacctaatttaagaagatcttctagagcaaagttgactttaaacgtggatgac
gaagaacggagttcagacgaaacgcaagcgggaaagttcccgatatacagcgtggagacg
ttacaaacggttcctcgcttcgcgatgacgtcgactgagaatggtgacctggtcacacaa
ttttccaaatcggtttccattgaaatgccggaaagaggcgcttcggtatcttcgaaaacg
agcgcaaaattaactgacagggaaaagcttgagaagaaaatagccgccgggacgatgaac
gacaacttcgtcagaataaatctgaagaagaaagtattcgtgcgagggaagaagaatttc
aatctgtccaagtacaagaaaaatcaatggaaacaaagaaagaaggatttggcgtcgagc
gagagcaacctggacgcagccgatctgatcgacaagaacggcatgacatgcttcaagtgt
ggcgagtccggacactttgctaagaattgctcagcttccaagagcgatgctcttctgcct
ctggaggagatcgacgagtcgtcaagttacccgactctggaggaagccgagaggatggca
aatgagaacgctgttgtcgctcatggtcacaggatcgatcggctacccgagaaaccgtct
cactccgttgcgaaagcatcgcagagcgacgaagccgaagacatggctcgattatttgaa
gacgactttgaaactccatatgagaagagcgaaactccgattgtcgggcacaagataccg
caggatttattgtcgaagttactgccgccacagatggacgtggttgagccgttgtacccc
acaaacgaagacggcagtctcaccgaaaccccagcggaggttttcgaggcgttacacatg
ttcggccacgagagcttccgggctggccaagagaaggcggtgatgagaattctgtctggc
caatccactctggtaacgctgtcgacgggctccgggaagtccttatgctatcaattacca
gcatacctgtattcccggcattcgcgctgcatcactctggtaatttcaccgctggtgtcc
ttgatggacgaccaggtgacgggtgtgccttcatttctatccgctgcgtgcttgcacacc
agccagacgccgaaggtgagggagcaggtgatgcgctccgtgaaggacggcacggtgaac
attctgctggtatcaccggaagcagtagtggcgggcgagaagtccactggtttcggagcc
ctgttgcgccagttgcctccgatcgcgttcgcctgtatcgacgaggcccattgcatctcc
cagtggtcgcacaatttccggccgtcctacctgatggtctgcagggtgctcaaggagaag
ttgcgtgtaaaaacggtgctgggacttaccgcgaccgccacgagggcgacggcggagagt
atagtaaatcatctgtacctccacgacggcatggctggcgttatatcggatgtaccgtta
cccaagaatcttgttctgacggtgtcgaaggatgaaaataaggatcaagctctgatcgcg
ctgttaaagagcgagaggttccagaaatgcgactcggtgatagtctactgcactcgtagg
gaagagtgtgcgagagttgcagggttgctgagaatagcgctgcaggatccacggaatcct
gagaagccgaacgcgaaggtgtccacaatagccgaggcctaccacgccggtatgactgct
cacagacgcaaaatcgtgcaaaaggaatttatgagcgggaagatcaagattgtggtcgct
accgttgcgtttggtatgggtatcaataaatcggatattcgggctgtcattcattacaac
atgcctggcactttcgaaggatacgtgcaggaagtcggtcgctgtgggcgagacggtctt
actggacactgccatttgttcttaaatccattgcgagacagtgataagtgggaactgcgc
agacacatacacgcgaacggcgtcgatcgtcatacaatccgacatctgcttcaaagaatc
ttcattccctgctcttgcgcgaggatcaacaaagagaaagctccggatcaaagatgtccc
ggtcacgaagtcgcacttccgatcgacgagactgttcaagccctcgacatcacggaagaa
acgatctccacattgttatgctacctcgagctgcatccgaagagattcattactgtgctc
tcatccgtgtacgtccgagcgcgaatctcgagctacaatggaccgcaagctctcaaacgt
gcggcgcaatcttctccaccgctcgcgatggcgatagcactggacatgcagaagggaatc
tcgcatgagaagagcaacatcatcgagttcccgataatcgacgttgcgtcggccatcggt
tgggacagcggcgtagtcaagagccacctgaagaatctggagtggacgacgggaggtgac
ggcagcgtaaaacgctcggctatatcgatgcattacgacaaactcggtttacgggtgaag
acaccgggcgatctcaccgataccgagttggacgaggcgctcgatgcattgattgcgcgc
acccgatctcaggaatcctcgtgcttgcaacagctcgagatcatatcctccgctcttagt
aagatcagcgtgccgtcgatcgagcactgctcagtcttgaacgacaatgtcacaaagaga
tcggaagagctcaaaggcaccatcagggactacttccagtcggattctcctttggccagt
gtggacatcaatttccaggataagatagcaaacgagcagcaaattgccgctgacgtgcgc
agtttggtaatgtgctacagagataccaaattcaccgggcgcgctgtggctcgaatcttc
cacggtatacaaagcccaaattatcccgcggtgatttggggcaagtgccgcttctggagg
gcttatttagccgcagattttaacgctatttacagaattgctactagagaaattttagcg
ctacgataa
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