KEGG   Ooceraea biroi (clonal raider ant): 105274472
Entry
105274472         CDS       T05778                                 
Name
(RefSeq) RNA polymerase II elongation factor Ell
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    105274472
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:obo01009]
    105274472
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:obo03021]
    105274472
Protein phosphatases and associated proteins [BR:obo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105274472
Transcription machinery [BR:obo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     105274472
    Little elongation complex (LEC)
     105274472
SSDB
Motif
Pfam: ELL Occludin_ELL DUF3864
Other DBs
NCBI-GeneID: 105274472
NCBI-ProteinID: XP_011328935
LinkDB
Position
11:2053430..2131060
AA seq 754 aa
MGDEEMALVPGVQYGLSSRDKFDQNNCLIFTKLTDSSFRAIQNYVKNRHKCNDKLSIQFL
GNEGKFIIPSGQGHGSAVFTFSLSSNQDMEGPQGGFECVQQIGPKSLEGLGAIPYRMRIQ
ANDEVYETTRYRMAVAEENSKNKCTRVIKANGPDIGRKVKVKGTGRTIPPPSSSYVRGYR
ELTSIPAASNSQPRTSTNKPAVNSSSNNHSTTTRTPEKKISDLMRRPLKERLIHVLALRP
YKKPELYDRINKEGLRERERPVMITILKQVAYMRDNTYHLHRHIWNDVQEDWPFYTEQEK
AVLKRRKPQNLTPPGSSDGSGQSPNSIHAGSPPAITAPPPSLLNNKRPGYHQGNDGLPTK
KPRISHYRKPEPISFVAASEKTSSVSSTGAGNYSNNNSGLNVTVGGDRTGDYTVDRSSAY
GGNNNSASASGGGGNSSGATSVADVSDPRQTQQTQRERSGRLDYRVERTANSDVLRGTTG
NSVAAITSTSRSSCQISSPNDNGRSSHHQSGNRRDGVATGASGAGGPSDTNADRRDRSDR
SRGMREDRESRNRSSFASNAATYSSRASTSAVPATYAGSSSNITAMTSPRMEVFEMPWSP
DPLVCRDYLTNYTTITSVEQKRRYKDDFIADYGDYRTLHSEVVVIAKRFKELYEEYQKQV
SLGNEVEQETISKQMVYEYWKIKKDKELMQRRNRFNYLHAKLDHIKQLLAAFEVEERANQ
AAMRVNKDMLALAYDTPMNPDSTVNTKGIDNRYY
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgggagacgaagaaatggcgctggtgccaggtgtccagtatggtttgtcgtcgcgggat
aaattcgatcagaacaactgcctgatcttcacgaagctcaccgactcgtcgttccgtgcc
atccagaactacgtcaagaatcggcataaatgcaacgacaagctttctatacagttccta
ggaaatgaagggaaattcatcattccatccggtcaaggacatggatcggccgtattcacc
ttcagcctttccagcaaccaggacatggagggtcctcaaggcggcttcgagtgcgtccag
caaatcgggcccaagagcctcgagggcctcggtgccataccgtacagaatgcggatacaa
gcgaacgacgaggtgtacgagaccaccaggtacagaatggcggtcgccgaggagaatagc
aagaacaaatgcaccagggtgatcaaggcgaacggtccggacatcggtcgcaaggtgaaa
gtgaaaggaaccggaagaacaataccacctccgtcatcatcgtatgtaagagggtatcgg
gaattgacgagcattccagccgccagcaatagtcagcccagaacgtcaaccaataaacct
gccgtcaatagtagtagtaataatcactcaacaacgactcgtactccggagaaaaagatt
tccgacctcatgcgtaggccacttaaggaaagactcattcatgttctcgctttgaggccg
tacaaaaagcccgagctgtatgatcgcatcaacaaagagggcctgagagaacgagagcga
ccggtcatgataacgatcctaaagcaagtggcttacatgcgcgacaacacataccacctg
cataggcatatctggaacgatgtgcaggaggactggcctttctataccgagcaggagaag
gcagtactgaagaggcggaaacctcagaacctaacgccacctggctcaagcgatggcagc
ggccagtcgcccaattccatccatgcaggttcaccgccagccatcacagctccaccgccc
agcttgctgaacaataaaaggccagggtaccaccagggtaacgacggactaccaacgaag
aaaccgcggatatcgcattacagaaaacctgagcccatctccttcgtcgcagccagtgag
aagacatctagcgttagcagcaccggcgccggcaactatagtaataacaatagtggtctc
aatgtgaccgtcggcggcgatcgtaccggcgactacaccgtcgatcgtagtagtgcttat
ggtggcaacaataatagtgctagtgctagtggtggtggtggtaacagcagtggtgctacc
agtgttgctgacgtatcggatccgaggcaaacgcagcaaacgcaacgcgagcgcagcggc
cgcctcgactatcgagtcgaaaggacagcgaacagtgatgtgctgcgaggaactaccgga
aactctgtcgctgccattacttccacctctcggtcttcgtgccagatatcgtcgccgaat
gacaacggcagaagcagccatcaccagagcgggaatagacgcgacggcgtcgcgaccggt
gcaagcggtgcgggtggtccgagcgacacgaacgccgacaggagagacaggagcgacagg
agtcggggcatgagggaggacagggagtccaggaataggagtagctttgcgagcaacgcg
gccacttacagcagccgagcctccaccagcgctgtcccggcaacttacgctggcagctcc
agtaacattaccgccatgacctcaccgcggatggaggtgttcgagatgccatggagtccc
gatccgttggtatgccgcgactacctcacgaactacacgacaataaccagcgtggagcag
aaaaggcgttacaaggacgacttcattgcggactatggcgactatcgtactttgcactcc
gaagtggtcgtgattgcgaagcgtttcaaagaattgtacgaggagtaccaaaagcaagtg
tcactgggtaacgaagtcgagcaggagacgatcagtaagcagatggtgtacgaatactgg
aaaattaagaaggacaaagagctgatgcagagaagaaatcggttcaactacctgcacgca
aagctggatcatataaagcaactgctcgcggcgttcgaggtagaagagagggcgaaccag
gcggcgatgagagtcaacaaggacatgctggcgttggcatacgacactcctatgaacccc
gacagcaccgtaaatactaagggcatcgacaatcggtactactga

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