Ooceraea biroi (clonal raider ant): 105274619
Help
Entry
105274619 CDS
T05778
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7 isoform X1
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03018
RNA degradation
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105274619
09123 Folding, sorting and degradation
03018 RNA degradation
105274619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105274619
03041 Spliceosome [BR:
obo03041
]
105274619
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105274619
mRNA degradation factors
5'-3' decay
Lsm complex
105274619
Spliceosome [BR:
obo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105274619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
105274619
NCBI-ProteinID:
XP_011329196
LinkDB
All DBs
Position
11:817713..818684
Genome browser
AA seq
111 aa
AA seq
DB search
MSATKQQQNVEHKEKKRKESILDLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNT
KEYLRDPDDPYKLNQDTRMLGLVVCRGTAVVLICPVDGMEAIPNPFIQQEG
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgacaaagcagcagcaaaatgtggaacacaaggagaaaaagaggaaagagagc
atcctcgacctctccaagtatctcgagaagaatatcagggtaaagttcgctggaggtagg
gaagccgaaggtatactcaaaggttacgatccactgctcaacctggtgctggacaataca
aaggagtaccttcgagatccggacgatccgtataaattaaatcaggacactcgtatgttg
ggcttagtagtgtgtcgaggaacagccgtagtcctcatctgtcctgtggatggtatggaa
gctataccaaatccatttatacagcaggaagggtaa
DBGET
integrated database retrieval system
