Ooceraea biroi (clonal raider ant): 105274655
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Entry
105274655 CDS
T05778
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105274655
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105274655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
ANAPC4_WD40
TPR_1
TPR_11
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
TPR_17
TPR_19
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
NBCH_WD40
TPR_2
Beta-prop_DCAF4
TPR_6
Corazonin
ANAPC3
Beta-prop_HPS5
Beta-prop_IFT140_1st
Kunitz_legume
Motif
Other DBs
NCBI-GeneID:
105274655
NCBI-ProteinID:
XP_011329256
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Position
11:complement(671762..678247)
Genome browser
AA seq
666 aa
AA seq
DB search
MFPSVQKKDYRILDLVRQREIHDSVTHTILQKLYVTESLISRLGLEKELYGHSGCVNCLE
WNETGQILASASDDKDIILWNPFRYEKILVLHSGHHANIFSVKFMSKSNDNILVSGAGDC
RIRIHDLTFSKPIFTCKCHKQRIKRIATVPSIPFLFWSAGEDGLFLQYDTRAPHVCRSNN
HNVLVNLVYHMGRYAEGKCIAVNPRKPELIAIGANDAYIRMYDRRMIKLSQVPPSPSIHD
NVDWASINTYRAGKGDPDENIPLGSAQYFIAGHLRSRDGNRSITATYLTFSDDGNELLVN
MGGEQIYLFDINDSNNSKIFSSCLSRKHSGSIEQDFGKYCLESYDSLEDFTEKNIKVLSP
HVEELKRKANENFEQKKYSLAINLYNKAISYCPTAAVLYANRAAAYMKRAWDGDIYAALR
DCKMTLLLDPEHVKAHFRLARCLFDLNRSIEANGVLKSFQQKFPEYTSNSAYKALKMDIK
EAINNGKDITQSNRSFFPISEYEQEWRNNTIDYKMRFCGHCNTTTDIKEANFFGNNSQYI
VAGSDDGSFFIWDRNTTNIVRVLRGDERIVNCLQPHPSTCLLATSGIDPVIRLWSPLPED
GSVNEREIQNLDDAASANQIRMNSDPFELMLMNMGYRFPISQNEFSDEDGEDQREPITQA
LNCRPS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctagtgtccaaaagaaggattatagaatcctagacctagtacgacaaagggaa
atacatgattcagtgacacatacaattttacaaaagctatatgttaccgagagtttaata
tcacgcctgggtttagagaaggagttgtatggtcactcgggatgtgttaattgtttagaa
tggaatgaaactggacagattcttgcatctgcatccgatgataaggatatcatattgtgg
aaccctttccgttatgaaaaaatattggtacttcattcaggccatcatgcaaatatattt
tccgtaaagtttatgtcaaaatcaaatgacaatatactggtgtcaggtgcaggggactgc
aggattcgaatacacgatctcacgttctccaaaccgatattcacatgcaaatgtcataag
caacgcattaagcgtatcgccactgtgcccagtataccctttttgttctggagcgcgggc
gaggacggtctgtttttgcaatacgacacacgtgcaccgcatgtttgtaggagcaacaac
cataatgtacttgttaatctcgtgtatcatatgggtcgctacgcggagggtaaatgcatc
gctgtaaatccgaggaagcccgagctgatagctatcggcgccaatgacgcttacatccgg
atgtacgatcgacgaatgatcaaattgtcgcaggttcctccatcgccgtctatacacgac
aacgtggactgggcaagtatcaacacatatcgggcgggcaagggtgacccggatgagaat
attcctctgggtagcgcgcaatactttatcgcgggccacctgcgttctcgcgacggtaac
agaagcatcacggctacctacctgacgttcagcgatgatggaaatgaattactcgtcaat
atgggtggagaacaaatttatttgtttgacatcaacgactcgaacaattcgaaaatattt
tccagctgtttgtcgagaaaacattcaggatcaattgagcaagactttggaaaatattgc
ttagaatcatacgatagcttggaagatttcaccgagaagaatataaaagtactatcaccg
catgttgaagaattaaaacgcaaagcaaatgagaattttgaacagaagaaatattcatta
gcaatcaatttgtataataaagcaatatcgtactgtccaacagcggcagtgctatatgct
aatcgagcagctgcttacatgaaacgtgcttgggacggtgatatttatgctgctttgcga
gattgtaaaatgacgttgcttcttgacccggaacatgtaaaagctcactttagattggcg
cgatgcctgtttgacttaaatcgatcgatcgaagctaacggtgtgctcaagagttttcaa
caaaagtttccagagtatacgtctaattctgcttataaagcattgaaaatggatataaaa
gaagctatcaataacggaaaagacattacgcaaagtaatcgttcatttttcccgatatcg
gaatatgagcaagaatggagaaacaatacgatagattacaaaatgagattctgtggtcat
tgtaatactacaaccgacataaaggaggcaaatttttttgggaataatagccaatatata
gtggctggctcagatgatggttccttttttatttgggatcgtaatactaccaatatcgta
cgtgttctgcgaggagatgaaagaattgttaattgcttgcaaccacatccatccacgtgc
ttattagctaccagcggcattgatccagtaattaggttgtggagtccattgccggaggat
ggcagtgtaaatgaaagagaaattcaaaatttggatgatgctgcatcggctaatcaaata
cgtatgaacagtgatccgttcgaattgatgctgatgaatatgggatatagatttcccatc
tctcagaacgaattcagcgacgaggatggtgaagatcagcgtgaaccgataacgcaagct
ctaaattgtaggccgagctaa
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