Ooceraea biroi (clonal raider ant): 105274799
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Entry
105274799 CDS
T05778
Symbol
Grd
Name
(RefSeq) GABA-gated ion channel isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04080
Neuroactive ligand-receptor interaction
obo04082
Neuroactive ligand signaling
obo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105274799 (Grd)
04082 Neuroactive ligand signaling
105274799 (Grd)
04519 Cadherin signaling
105274799 (Grd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
obo04040
]
105274799 (Grd)
Ion channels [BR:
obo04040
]
Ligand-gated channels
GABA-A
105274799 (Grd)
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Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
105274799
NCBI-ProteinID:
XP_011329534
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All DBs
Position
14:5511095..5545583
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AA seq
518 aa
AA seq
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MREFPHEGNEDPAWNIMKRRVLLALANLITSYASFLTAAGVRTSARQRTQSNNHSNISDL
LDNLLRGYDNSIRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDRRLAFK
GGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKA
GCPMNLEDFPMDTQRCPLQFGSFSYTTRDVIYKWNSARQVAIAEDMKLSQFDLVANPTAN
HSTAPGFSHANYSILHVYFHLQRHMGNFLIQVYGPCVLLVVLSWVSFWLNREATADRVSL
GITTVLTMTFLGLEARTDLPKVPYPTALDFFVFLSFAFIFATIIQFAVVHYFTKYGSGEC
YFISDLSDTESSSEEEDVARRLVKSQPTRRKGSTSSRGRDRSFAVNDDGMIEVIPLSAVS
IPDKDPAVTGHWQISCVTCSPSPRHTPPPLPSLPSRRATSSTSRRRHRRTPRYNSVSKID
RASRVVFPVFFLAINLFYWYAYLSRSERIHSYNSNTAR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtttccacacgaaggaaacgaggatccggcctggaacattatgaagcgaaga
gtcctgctcgctcttgctaatctcatcacttcttatgcttcctttctaacggctgcggga
gtgaggacttccgccaggcaacggacgcaaagtaacaatcatagtaacattagcgacctg
ctggacaatctgcttcgcggttacgataacagtatcaggccggatttcggtggacctccg
gctacagttgaggttgatatcatggtacgcagcatgggtcccatttccgaggtggacatg
acgtattcgatggactgttacttccggcaatcgtgggtcgataggcgtttagcgtttaaa
ggtggtggtaaagaaacactggcattgagcatttctatgttggcgagaatttggaaaccc
gacacgtacttctacaacggcaagcacagttacttacacacgattactagtccgaataag
tttgtcagactttatcaggacggaagagtactttacagttcaagacttacgatcaaagcg
ggctgtccaatgaatctcgaggactttccgatggatacacagagatgtccattacaattc
ggcagctttagttacacgacacgcgacgtaatctacaagtggaacagtgcgagacaggtc
gctatagcagaggacatgaaactgtcgcaatttgatctggtcgccaatcccaccgcgaat
cactcgactgcaccgggattctcacatgcgaactactcgatactccacgtgtacttccac
ttgcaaaggcacatgggcaacttcctaatacaggtatatggtccttgcgttctgctggtc
gtcttgtcttgggtctccttctggttaaacagagaagccaccgctgatcgagtgtcacta
ggcataactaccgtgctgacgatgacattcttaggactggaagctagaaccgacctgccg
aaagttccctatccgactgctctggattttttcgtctttctctcatttgctttcattttc
gccactataatacaatttgcggtggtacattacttcaccaagtacggctcgggcgagtgt
tacttcatctctgatctgagcgatactgaaagctcgagcgaagaagaagacgtagccaga
aggctggtgaaaagtcaaccgactcgtcggaagggttccacaagttctcgaggacgcgac
cgcagtttcgcagtgaacgacgatggtatgatagaagtgataccattgtcggccgtttcg
atacctgacaaggatcctgctgtaactggccactggcaaatatcttgcgttacctgcagt
ccatcaccccgacatacgccaccaccgctgccgtctctgccgtctcgacgagcaacatcg
tccacgtctaggagacgacatcgaagaacgccccgatacaattcggtatcgaagatcgac
cgcgcgagccgtgtggtgtttcctgtcttcttcctggccatcaatctcttctactggtac
gcgtatctctcgcgtagcgaacggattcactcttacaattccaataccgcgcgatag
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