KEGG   Ooceraea biroi (clonal raider ant): 105274922
Entry
105274922         CDS       T05778                                 
Name
(RefSeq) poly(U)-binding-splicing factor half pint isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105274922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obo03041]
    105274922
Spliceosome [BR:obo03041]
 Complex A
  U2 snRNP components
   U2 related factors
    105274922
 Complex B
    105274922
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_3
Other DBs
NCBI-GeneID: 105274922
NCBI-ProteinID: XP_011329714
LinkDB
Position
1:complement(16142124..16151030)
AA seq 593 aa
MNGTMAMAPTPQNSIEPSAKKMKVEGNASEFLPGPIYDLNQIGQVVAGPGAKYLTLPGIL
GAGLPKITSEQQDTVNRAKKYAMEQSIKMVLMKQTLAHQQQQMASQRNQVQRQQALALMC
RVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQ
MNGVMIGGRNIKVVGRPSNMPQAQSVIDEITEESKHYNRIYIASIHQDLTEDDIKSVFEA
FGPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITPPNA
LMGPPSGTSMMPTAAAVAAAAATAKIQAMDAVASNAVALGLTKLGAAAPPILNQALPGVV
RPTIAPATIMTPPTVATVAPVIPPPGIAIPQTLTRPPAIIQPIPGQQVVIPPPAVVAPTI
VGTPVAIPVTTTASSDIMRRAQEQAAHQKQQEELQKKLLEETEPQTLQQQENMSIKGQSA
RHLVMQKLMRKVESRVVILRNMVAPEDVDETLQEEIQDECSKFGVVERVIIYKERQSEDD
ENAEVIVKIFVEFSQMSEAERARDSLNGRYFGGRLVKGELYDQALFDNSDFSG
NT seq 1782 nt   +upstreamnt  +downstreamnt
atgaacggaacgatggcgatggcaccaacgccacaaaacagtatcgagccgtcggcgaag
aagatgaaagtggaaggaaatgcatccgagttcttaccaggccctatatatgatctcaat
cagataggtcaggtcgtcgctggacctggcgccaagtatctgacgctgccgggcatacta
ggagctggcttaccgaaaatcacatccgagcagcaggacacagtaaaccgagccaagaag
tatgcgatggaacagagcatcaagatggtcctgatgaagcagactctggcccatcagcag
cagcaaatggcaagtcagcggaatcaggtgcagagacagcaggctctcgccctcatgtgc
agggtttacgtgggcagcatcagtttcgaattgaaagaagacacgatcaggcaagctttc
ttgccgttcggaccaatcaagtctatcaatatgtcttgggatcccgttacacagaagcac
aagggcttcgcctttgtggaatacgagatacctgaggcggcccaacttgctttggagcaa
atgaacggtgtcatgatcggtggccgtaacatcaaggtcgttggacgtccgtccaatatg
cctcaagcgcaatcggtgattgacgagatcaccgaggagagcaagcattacaatcgcata
tatatcgcgtcgatacaccaggacttgacggaggacgacatcaaatcggtcttcgaggct
tttggcccaatcacttactgcaagcttgcacagggcagttcgccacatcgccacaagggt
tacggcttcatcgagtacgagacgatgcaggccgcgctggaagcgatagcctcgatgaat
ctgtttgatctaggcggtcaatacttgcgagtcggtcgtgctatcacgccgccgaatgcg
ctgatgggaccacccagtggcacgagcatgatgccaactgcagctgcagtagctgcggca
gcggctacggcgaagatccaggcgatggatgcagtagcgagcaatgcagttgcattaggt
ctcacgaaattgggagcagcggcaccaccgattctgaatcaagcacttccaggcgtggta
cggcccactattgctcccgcgacaataatgacaccaccgacggtggctacagtagcaccc
gtgatacctccgcctggtatagccatacctcagacattaacgcgaccacctgccatcata
caaccgatccccggccagcaggtcgtgataccaccacccgccgttgtcgcccctactatc
gtcggcacgccagtcgccataccggtcacgacgacggcgagttccgacattatgaggcga
gcacaggagcaagccgctcatcagaaacagcaggaggagttgcagaaaaagttgctcgaa
gagacggagccgcagacgttgcagcagcaggagaacatgtcgatcaagggtcagagcgcg
cgtcaccttgtgatgcagaagctcatgcgcaaggtcgagtcccgagtggttattctgaga
aacatggtggcgccggaagacgtggacgagaccttgcaggaggagattcaggacgagtgc
tccaagttcggcgtggtcgagcgagtgatcatctacaaggagaggcagtccgaggacgac
gagaacgcggaagttattgtgaaaatattcgtcgagttctcccaaatgagcgaagcggaa
cgcgcgagagactcgttgaacggccgttacttcggcggacggctggtgaaaggggagttg
tacgatcaagctctgttcgacaatagcgacttctccggttga

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