Ooceraea biroi (clonal raider ant): 105275057
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Entry
105275057 CDS
T05778
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105275057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obo03009
]
105275057
Enzymes [BR:
obo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
105275057
Ribosome biogenesis [BR:
obo03009
]
Eukaryotic type
90S particles
Other 90S particles
105275057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
105275057
NCBI-ProteinID:
XP_011329999
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All DBs
Position
8:12811012..12814500
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AA seq
235 aa
AA seq
DB search
MSHKRKKRGEDDYEYDPAPKHLQVGHIRNQEKRLIVILENAQLESVKNGSAFELLNCDDH
VGILKKNNRFPGTCRPDITHQCLLMLMDSPLNRAGLLQVYVHTNQNVLIEINPQTRIPRT
FKRFAGLMVQLLHKYNIRASDGPMKLLKVIKNPISDHLPVGCRKILMSFNANKVQNPKEL
VPAEEPIAIVVGAMAHGQVKVNYTEDTISISNYPLSGAITCSKLCTAFEEVWEIV
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagtcataaaaggaagaaacgcggcgaagatgattatgaatacgatccagctcctaag
catctgcaggtgggacacatcagaaatcaagaaaagcgcctcatcgttatactggagaat
gctcaattggaatctgtgaagaatgggagcgctttcgagctattgaactgtgacgaccat
gtaggcatcctgaaaaagaataatcgttttcccggtacctgcaggccagatatcactcac
caatgtttgttaatgttaatggacagtccactaaacagagctggcttgctgcaagtctac
gttcacacaaaccagaatgttctgatcgagattaacccacagaccaggataccgaggaca
tttaaacgcttcgctggattgatggtgcaattgttacacaagtacaatattagggcgtcc
gatggaccgatgaagcttctcaaagtgatcaagaatcccatatcggatcacttgccagtc
ggctgccgtaagattctgatgtcatttaatgcgaataaagtgcagaaccccaaagagctc
gttcctgctgaagaaccgatcgcgatcgtagttggagcaatggcacatggccaggtcaaa
gtgaattacacggaagatacgatctcgatcagcaactatcctctttccggtgccatcacg
tgcagcaagttgtgcacggcattcgaggaagtttgggaaatagtttaa
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