Ooceraea biroi (clonal raider ant): 105275169
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Entry
105275169 CDS
T05778
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105275169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105275169
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105275169
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
105275169
NCBI-ProteinID:
XP_011330135
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Position
5:complement(9449905..9454769)
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AA seq
228 aa
AA seq
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MAMATNQVKGSGWPRRASNSSFEGKVVQNQSVTINRTVNLYPLTNYTFGTKEPLFEKDPS
VPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNTGEDEVE
GLKRLLTETFGRQDGVKQEWVIEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLFLVQL
QEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQSLCRFNFIYM
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgacgaaccaagttaagggcagtggctggccccggcgggcgagtaacagt
tccttcgaagggaaagtcgtgcaaaatcaatcggtgaccatcaacaggacagtcaattta
tatcctttgacaaactatacatttgggacaaaagagccactgttcgagaaagatccatcg
gtaccagcaaggtttcagcgcatgagagatgaattcgataaaatcggcatgcggagaagc
gtagagggggtgttactggtacacgagcacggattaccacacgttctccttctacaactc
ggcacaacattttttaaattacctggcggagaactcaatacaggagaagatgaggtagag
ggcctaaaacggctccttacagagacatttgggcggcaggatggagtgaaacaggaatgg
gttatagaagatactattggaaattggtggcggccgaactttgagccaccccagtatccg
tatgtgccaccacacattacgaaaccaaaggagcacaagagattattcctcgtccagttg
caagaaaaagctctctttgctgtaccgaagaactacaaattagtcgccgcgccactgttc
gagttgtacgataattcgcaaggatacggtcctataatctcgtcattaccacaatcatta
tgcaggtttaattttatctacatgtaa
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