Ooceraea biroi (clonal raider ant): 105275472
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Entry
105275472 CDS
T05778
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105275472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105275472
Spliceosome [BR:
obo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105275472
Complex C
U4/U6.U5 tri-SnRNP related factors
105275472
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
zf-C2H2
Exonuc_VII_L
DUF5034
MauJ
SNRNP27
Motif
Other DBs
NCBI-GeneID:
105275472
NCBI-ProteinID:
XP_011330623
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All DBs
Position
8:10894290..10895973
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AA seq
197 aa
AA seq
DB search
MSARPDDHRRKWNREEYERIALQRLQDEIAEEELGIPKQPAVKRELLKQRDYKVDLESKL
GKSVVINKNTPSSQTGGYYCNVCDCVVKDSINFLDHINGTKHQRNLGMSMKVERSTLDQV
KARFTQNKKKLEEKKKDYDLEQRVKELKEEEEKIKEYRKEKRKDKKRKIEELAEDDAGPS
DEMAAVMGFSGFGSKTK
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcgacccgatgatcaccgaagaaaatggaatcgggaggagtatgaaaggatc
gcgttgcaaagacttcaagatgagatcgcggaagaagaattgggaattcccaagcagcca
gcggtcaaacgagaattgctgaaacagagagattacaaggtagacctagaatctaaactg
ggaaagagtgtggtcatcaacaagaatactccgtcgtctcaaactggagggtactattgc
aatgtctgtgactgcgtggtcaaagattctatcaatttcttggatcatatcaatggaaca
aaacatcaacgtaatctgggcatgtccatgaaggtagagcgatctacattggatcaagtt
aaggcaagattcactcaaaacaagaaaaaactcgaagagaagaagaaggattacgacttg
gagcaaagagtaaaagaattgaaggaagaggaagagaagattaaagaatacagaaaggaa
aagcggaaagataagaagagaaagatcgaagagttggccgaggacgatgcgggaccgtct
gacgaaatggctgcggttatgggattctccggctttggctcgaaaacgaagtga
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