Ooceraea biroi (clonal raider ant): 105275694
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Entry
105275694 CDS
T05778
Symbol
Fen1
Name
(RefSeq) flap structure-specific endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03030
DNA replication
obo03410
Base excision repair
obo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105275694 (Fen1)
03410 Base excision repair
105275694 (Fen1)
03450 Non-homologous end-joining
105275694 (Fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obo03032
]
105275694 (Fen1)
03400 DNA repair and recombination proteins [BR:
obo03400
]
105275694 (Fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obo04147
]
105275694 (Fen1)
DNA replication proteins [BR:
obo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
105275694 (Fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
105275694 (Fen1)
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
105275694 (Fen1)
Exosome [BR:
obo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105275694 (Fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
105275694
NCBI-ProteinID:
XP_011331026
UniProt:
A0A026WW32
LinkDB
All DBs
Position
8:8026387..8028529
Genome browser
AA seq
380 aa
AA seq
DB search
MGILGLSKLIADIAPEAIKEQELKNYFGRKIAIDASMCLYQFLIAVRSEGAQLTTVDGET
TSHLMGTFYRTIRLVEQGIKPVYVFDGKPPNLKDGELAKRAERRDEAQKLLQAAEEDGNV
EDIDKFSRRLIKVTKTHVEDAKQLLQLMGIPYVDAPCEAEAQCAALVKAGKVFATATEDM
DALTFGSNVLLRRVTFSEARKLPVQEIHFDKVLAGLELNHDEFIDLCIMLGCDYTGSIKG
VGPKRAIELIKNHRSLEKIIESIDTKKYPVPENWNYKEARMLFQEPQVASADDIQLKWSE
PDEEGLVKFLCGDKQFNEERVRNGAKKLHKARNTSTQGRLDSFFKVLPSTTPSKRKIEEK
KPPAKKAKGAGNSKFRGKAK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggtattttaggcttgtcaaagttaatagcggacatagctccggaagcaattaaagaa
caagaattgaagaattattttggtcgcaaaatagcgatcgatgcgtccatgtgtttgtat
caattccttattgctgtgcgcagcgaaggtgcacagctcactactgtagatggagagaca
accagtcatttaatgggcacgttttatcgcaccatacgtttagtagagcaagggataaag
cctgtgtatgtgtttgacggaaaaccaccaaatttgaaagatggagaattagctaaacgg
gcagaaagaagagacgaggcgcagaaacttctgcaggctgcggaagaagatggaaatgtg
gaagatatagataaatttagcagaaggttgattaaagttacaaagactcatgtcgaggac
gctaaacaattgctccaattaatgggtataccttacgttgatgcaccttgcgaagccgaa
gcgcagtgcgctgccctagtgaaagctggcaaagtgtttgctactgctacggaggatatg
gatgctcttactttcggctccaacgtactacttcgacgtgtgaccttcagcgaagctcgg
aagttgcctgtgcaagagattcatttcgacaaggtccttgctggcttggaattaaatcac
gatgagttcattgatctctgtattatgttgggctgcgattataccggtagcatcaaaggt
gtcggtccgaaacgagcgatagaattgataaagaatcaccgatccttggaaaagatcatt
gagagtatcgatacgaaaaaatatcccgttccagaaaattggaattacaaggaggcgagg
atgttgtttcaagaaccgcaagtggcgagcgccgatgatattcagttgaaatggtccgaa
ccagatgaggagggtctggtgaaattcttgtgtggggacaagcagtttaatgaggagcgg
gtaagaaatggagccaagaaactgcataaggctcgaaatacatcgacgcaaggccgattg
gactcatttttcaaagttttacctagtacgactccgtcaaagcgaaagatagaggaaaag
aagccaccggctaaaaaggcgaagggagcaggtaacagtaaattccgcggtaaagcaaag
tga
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