Ooceraea biroi (clonal raider ant): 105275892
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Entry
105275892 CDS
T05778
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105275892
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105275892
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF3730
Focadhesin
TPR_TNPO3_IPO13_3rd
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
105275892
NCBI-ProteinID:
XP_011331378
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Position
11:complement(5124411..5129416)
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AA seq
1191 aa
AA seq
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MDETDILHKLKSQNPTLISHAISKLIEITKKKKLEAEKRDISEIPEFKLLSSKCNSDDSI
VSTSACQALVVLVETGLWDVKSALATFMACLSSSKNYQAITVAMSQLLILDWKACDERDR
YALQVPNQHPFITILNQEKRSWRCVLNQMKLIMHHRDKQYDFLERSAELLRPVFLHVLCD
PSMDWSDSCKREMWQLIIKSDSASDLKAEILLWLCTNRADNCVDANCRVLELAEVSLLKA
DKEYCTALVPLIASLTIQLLEYGHEPVQNFCAIFDLIEQCHNYVGNITVVLMTEIILVCP
AAYLFTALQICAIIVDKMPCNVILLNALSASLLKWLAYPSLLCSDALATAKELLIRISSK
RGTDSDGDAAITNKVLLMFSHSNRYIQLYMELIRSLQRLEDDVLLWLDNLSLAPIDLRYM
CKLILCGIFLHSDEPLVVQKTCGILVQITREINSFASHMLSLLLHKLTKSRDSATAERLL
LALPEFAVSKENLPIIVHTLDTLLNSGKPLKYLAIQLYLKALDREPRCYRFVSAALMDTL
ENDRDWHSDVTCARAIKYICENRPEHGEELVPLLSQILNRCVDSNGGAASALALDSISAL
CKSAVIGICSTWQVIAPKMRKEKRTAVLGSLCELLAEVPSFPFRAGDDYDKFIVDVVTHL
WSYVLYQDTKIAGSAFKALRSYHLERVPLSALPQDFKLDLVSQASSGKVDETNKSENALQ
YIPSTCWIEMLKKVNKNVLSAAGNLLIFYIENELSGFRSRIYSWPQGEPQNFKYLPERSV
IRAVGEYLRRGDKSDPNNQRVMVECLRIFAYRYKKPLPNVKWDFLKETMEMSEEAREYSL
SIASRHSQISSSAKQLTEGFLSMYASASEAGRLLLNEKHTVLFSNLDELCQAIQPTTLKQ
FLETSLAYVIVRISFDDEKAIELFNCIMSSYVSALKSDVIQMGNRTLLSTVLEELLEKVD
LTSKRYEKYFTATMEMSIKDVEKMTSPSVWWTVTPEKLRNAIVIRTELAFKRFIGTPLTW
LNELIVAAASDSKMQRHLLENIQRVQTDLRLEKSCDLGSQKDWILDFMNRIDMLMVETSE
KESNIVFYCDILFVLVICLSGMDCLLPKKELLITSQDIRIRLFPQAISMLIDRQIWKSIT
RQIMKWLNHMRTNSTLDGYTSAFQSALILLRYEEDYNSQWINYLSVKTCIH
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaactgatattttacataaactaaaatcacagaatcccactctgatatcacat
gcaatatccaaactgattgaaataacgaagaaaaagaagttggaagcagagaagagggat
atttcagagataccagaattcaagttactctcgtcgaagtgcaacagtgatgattccatc
gttagcacatccgcgtgtcaggcactggtcgtactcgttgaaactggattatgggatgtc
aaatctgcgttggcaacattcatggcatgcctgtcttcttcaaaaaattatcaggcaatc
acggtagctatgagccaactgttgatattagattggaaagcgtgcgatgaacgcgacagg
tatgctcttcaggtgcctaatcaacacccgttcattacaatcctgaatcaggagaagcgt
agctggagatgcgtgctgaatcaaatgaaactgatcatgcatcatcgtgacaaacagtat
gatttcttggaacggagtgcagaattgttacgacctgtattcttgcacgtgttatgcgat
ccgtccatggattggtcggacagttgcaagcgggagatgtggcagcttataatcaaatcc
gacagcgcctcggacttaaaagctgagatcctgctctggttgtgtaccaatcgagcggac
aattgcgtagacgcgaattgccgggtgctcgaactcgcggaggtctcgttgctgaaagcg
gacaaggaatactgcacggcgctggtacctctgatagcgtctctgacgatacaactcctg
gagtacgggcatgagccagtgcaaaacttttgcgcgatatttgacctgattgaacagtgt
cacaactacgttggaaatatcacggtagttttaatgacggaaataattctggtgtgtccc
gcggcttacttgttcaccgccctacaaatatgtgcgattatcgtggacaagatgccgtgc
aacgttatattattgaatgcgttatctgcatccctgttaaagtggctggcctatccctcg
ttgctgtgctcggacgcgctagccacagcaaaagaattgttaatcaggatatcgtcaaaa
agggggaccgacagcgacggcgacgccgctatcacgaacaaggtgctgctcatgttcagc
catagcaataggtacatccaactttacatggaactcatccgcagcctgcagcgcctggaa
gatgacgttctactgtggttggacaacttgtcgctcgcaccgatcgacctgcgatacatg
tgcaagctgatattgtgtgggatcttcttgcacagtgacgaacctctcgttgtacagaaa
acgtgcggcattctcgtgcaaataacgagagagatcaactccttcgcgtcgcacatgctg
tctctgttgctgcacaaattaacaaagtcccgtgacagcgccaccgcggaacgcctgctg
ctggccctgccggagttcgctgtgtccaaggaaaacctgccgatcatcgttcatacgttg
gacacgctgttgaacagtggcaagccactcaagtacctggcgatccagctctacctgaag
gcgctggacagagagccgcgttgctaccgtttcgtgtccgccgctctgatggacacgtta
gagaacgaccgcgactggcactcggacgtgacgtgcgctcgtgcgattaaatacatctgc
gaaaaccgacctgagcacggcgaggagctcgtgccgctgctctcgcaaatcctgaaccgc
tgcgtcgactcgaacggcggtgcagccagtgcactcgcgctcgatagcatctcggccctg
tgcaagtccgcggtgataggcatctgctcgacttggcaagtgatagcgccgaaaatgcgc
aaggagaagcgcacggcagtcctggggagtctgtgcgagctcctcgcggaggtgccctca
tttccatttcgtgcgggcgacgattacgataaattcatcgtcgacgttgtgacgcacttg
tggagctacgtactttatcaggacacgaagatcgcaggatcagctttcaaggcattgaga
tcctaccacctggaacgagttcctcttagcgcgttgcctcaagatttcaaattggacttg
gtgtcgcaggcgtcttccggcaaggttgacgagaccaacaagtccgaaaacgcgctgcaa
tacataccgagcacttgttggatcgagatgttaaagaaggtgaacaagaacgtcctctcg
gctgccggaaatcttctgatattctacattgagaacgagttgagcggcttcaggtcgcga
atatacagctggccgcaaggagagccgcagaattttaaatatttgccggaaaggagtgtg
atacgggccgtcggcgagtatctgagacgaggcgacaagtcggacccgaataatcaacga
gttatggtggaatgtctgcgtatattcgcttacaggtacaagaaaccattgccgaacgtg
aagtgggatttcttgaaggagaccatggagatgtcggaggaggctcgggaatacagtttg
tccattgcgagccgacattctcagatctcgtcgtcggcaaaacagttgacggagggtttt
ctgtcgatgtacgcgtctgcgtcagaagcaggccgattgttgctgaacgagaaacacacg
gtgctcttctcgaatctcgacgagctgtgccaagctatccagccgaccaccttgaagcaa
ttcctcgagacttccctcgcttatgtcattgtcagaatatcgttcgatgatgaaaaagcg
attgagttgttcaactgcatcatgtcttcgtacgttagcgctttaaagagcgacgtgata
caaatgggaaatcgcacattgctgtctaccgtgctggaggagctgttggagaaggtcgat
ttaacatcgaagcgttacgagaaatattttacagctacaatggaaatgtcgatcaaagat
gtcgagaaaatgacgtcacccagcgtttggtggacggtaacgccggagaaactgaggaac
gctatcgttatcagaaccgaattagctttcaaacgatttattggcacaccactcacttgg
ctgaacgagcttattgtcgcggctgcgtccgactccaagatgcaaaggcatttgttagag
aatatacaaagggtacagactgacttaagattggagaaatcctgcgatcttggatcgcag
aaggactggattctggattttatgaatcgcatcgatatgctcatggtggaaacgtcggag
aaagaaagcaacatagttttttactgcgacattttattcgttttagttatctgtctgtcc
ggcatggactgtctgctaccgaaaaaagaactgctgattacttcgcaagatattagaatc
agattgttcccacaagcgatttctatgcttatcgacagacagatctggaaatccataact
cgtcagattatgaagtggctgaatcacatgagaactaattccacacttgacgggtataca
tccgcatttcaaagcgcattgattttgttaagatacgaagaagactataattcacaatgg
ataaattatttatcagtcaaaacttgtattcactga
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