Ooceraea biroi (clonal raider ant): 105275955
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Entry
105275955 CDS
T05778
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A isoform X3
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105275955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obo03032
]
105275955
03400 DNA repair and recombination proteins [BR:
obo03400
]
105275955
DNA replication proteins [BR:
obo03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105275955
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105275955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
BRCT_TopB1_SLF1
RTT107_BRCT_5
DUF6047
Motif
Other DBs
NCBI-GeneID:
105275955
NCBI-ProteinID:
XP_011331488
LinkDB
All DBs
Position
9:complement(13985268..13994465)
Genome browser
AA seq
1076 aa
AA seq
DB search
MGPLDGAKVRVVVASENGPLSEKLRYAMDNDIACLKPNWVYESIKVGYALPFSNFVIKSA
KACSTPEQPNIRETLSCSEISCIPFDKQHNNYINESSVSTMSNMSPVNAATNNFYGTATL
NVVSRLTFSEAKSAGSFLDGCNIYLAGFVTSIRDKLNRILNVGGATRLDDISDAVTHVIV
DDENKAAAELRAMKLRGLSPYVLSIEWLEESMKLKRPAPEEHFLFESKSGASKKNIETPA
SPLSKKNLQMLQPKRPPVPPFNMEQKNTPTNEEHQPNNTLVQQYLQEATESNSTMPRSMK
SSTSESENKRNRSNLNDIKDARVNENSSETTQSKDLGNESNVPASQSCTVNEKLLTGLTF
VVIGFDTETIHPAETIEMLGGRVVSKAYSGIPDYGVVPLHGAPLKHTVNEIVTDLFIEDC
INQEQIVSIMYYHKPLFIRKTCSPLSGCVITMSMYTGVERLYLSTLAMKLGAICQDMFAR
KPNTERNTYGSTHLVCPTPEGNKYNAAVRWKLPAVTADWLKTCADQLALIDETPFLVGET
IASSRSNSKKTNVPEKSVAVEEATSSLNNRNILTPKRYLSQYKDQEMRSIETPLVNKRLS
LVMNQTPQSPFHVSTPETPYGQVFKSNPSPDTRKGWIKWVDNFPDLQVAEPPLKRRAPST
PLSELKKQLWEKLKKPDQSDKTNELDHSTLKPNKDSSTEKTIEKEIDDQSRKNIQATVEC
NRKLHFDEEGSPPSNISSNEINMQIAQLDQVLQRTSSTPENRYSLSGENAKKYNDAEAPD
HIQKYVIKDSQPIDAIVWEDPNHPKRLTNISNRRTNITEKDNDSSNIDIEEHIEDNIEKY
EHGPSIRNQPRKFMLSGIKDKTTYERVIMGLYGEVSTDTNFDNSATHLLCVRLARNEKML
GSIASGKWVLHCSYLRDSEREGRFLNEEEYEWGNPKSKGKIPEPNGEIEQAIATAAYRWR
NKLLCESNGPFSGMVALLMVSEEKYDQFKRLIEAGNGSVIQARPPYDTSPSGRKITHCFV
NVKQVNQPIDWAMLASKGILCFLPQYLSDYLTAVKPLNLRDSVLPEFKKYLSLLPK
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgggccctctcgatggagcaaaggttcgagtggttgtggcttccgaaaatggcccgttg
agcgaaaagttaagatacgctatggataacgatattgcgtgtttgaaaccgaattgggtg
tacgagagcatcaaagtgggatatgctttgcctttcagcaattttgttatcaaatctgcg
aaggcttgctcaacaccagaacaaccaaacattcgagaaacgctcagttgctccgagatt
agttgcataccatttgataaacaacacaacaactacataaatgagagctctgtttcgacg
atgtcgaatatgtctcctgtgaatgcggcaactaataatttttacggcaccgctacgtta
aacgttgtgagtcgactcaccttcagtgaagcgaaatcggctggatcatttctggatgga
tgtaatatctatctcgctggattcgtgacgagcatcagagataaattgaatagaatatta
aacgtgggtggtgcgacgcgtctggatgacatatcggatgctgtgacgcacgtgatcgtt
gacgacgagaataaagcagctgcagaactaagagcgatgaaattaagaggtttaagtcct
tacgtactgagcattgaatggctggaagaaagtatgaaacttaaacgacctgcaccagaa
gagcactttttgtttgaatctaaaagtggagcatccaagaagaatatcgagacccctgct
tccccactcagtaaaaagaatttgcaaatgttgcaaccaaagaggcctcctgtacctcct
ttcaacatggaacaaaagaacacgcctacaaatgaagaacatcaacctaataacactctt
gtacagcaatatctgcaggaagctaccgaatctaacagtacaatgcctagatctatgaag
tcttctacctccgaatctgagaataagagaaatcgaagcaatttgaacgatataaaagat
gcgcgtgtcaatgaaaattcctcagaaaccacgcagtccaaggatctcggaaatgagagt
aacgtgccagccagtcaaagctgcacggtgaacgaaaagctactaacaggcttgacgttt
gtcgtgatcggtttcgacactgaaactattcatccggcggaaacgattgagatgttgggt
ggacgtgtagtctcgaaagcgtacagtggtatcccggactatggcgttgtacccctacac
ggagcgcctttgaaacataccgtcaacgaaatcgtgactgatttattcatcgaagactgc
ataaatcaggagcaaattgtcagcattatgtattaccacaagccgttattcattaggaaa
acttgtagtccactatcgggatgcgtaataacgatgagcatgtataccggagtggaacga
ctctacctttcaacattggccatgaaacttggcgctatatgccaggatatgttcgcgcgg
aaacctaatacggagagaaatacgtacggcagtacgcatctggtttgtccgaccccagaa
ggaaataagtataacgcggccgtgagatggaaacttccagccgtcactgctgattggttg
aaaacttgcgcggatcagttagcgctcatagacgaaacaccatttctcgtcggggagacg
atagcatcaagtagatcgaattccaagaaaacaaatgttcctgaaaaatctgtcgcggta
gaagaggccacgtcttcccttaataacaggaatattcttacaccgaaacgctatttatct
caatacaaggatcaagaaatgcgctctatcgaaaccccgttagtaaataaaagactcagc
ctcgtaatgaatcagacaccgcagtcgccgtttcacgtatctactccggagactccgtac
ggacaggttttcaagtccaatccttcgccagacacgcggaaaggatggatcaagtgggta
gacaattttccagatttgcaagtggcggaaccaccattaaaacgtcgcgcgcctagcact
ccactctcagaattaaagaagcaactatgggagaaactgaagaaaccagatcaatctgat
aagacaaatgaattggatcactcgacattaaagccaaataaggattcctccacggaaaaa
actatagagaaagagatcgatgatcaatccagaaaaaatattcaagcaactgtcgaatgt
aatcggaagctccactttgatgaagaaggtagtccgccgtcaaatatatcgagcaacgaa
ataaacatgcagatagcgcaattggatcaagtacttcaacgaacatcgagtaccccggaa
aacagatattcactgtccggagaaaatgcgaagaagtacaacgatgctgaagctcctgat
cacatacaaaagtatgtaataaaggattcgcaacccatagacgcaattgtatgggaggac
ccgaatcatccgaagcgattaacaaacatttcgaacagacgaacaaatataacagagaag
gataacgatagcagtaatatagatatcgaagaacatatcgaggataacattgagaaatat
gaacatggaccatcgatacggaaccaaccaagaaagttcatgctttcgggtataaaggat
aaaaccacgtatgaacgggtgatcatggggctatacggagaagtatcgacagatacgaat
tttgacaacagtgctacgcatcttctatgtgtcagactagccagaaacgaaaagatgctc
ggcagcatagcatccggaaaatgggtcttacactgctcgtacctacgtgactccgaacga
gaaggcagatttctcaacgaagaggagtacgaatggggcaatccgaagagcaagggtaag
attccggaaccgaatggtgaaatcgagcaagcgatcgcgaccgcggcttataggtggagg
aataaattgctctgtgagtcaaacggtcctttttctggcatggttgctctgctaatggtc
tctgaagaaaaatatgatcagtttaagagactgattgaagctggcaatggttcggttata
caagcaaggcctccttacgataccagtccgtccggacgtaagatcactcactgctttgtc
aacgtcaaacaggtgaaccagcctatagactgggccatgttggccagtaagggtattctc
tgctttttgccgcaataccttagtgattatttgacagcggtgaaaccgctcaatctgcga
gattccgtgttaccagaattcaaaaaatacctgtcgctactacccaagtaa
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