Ooceraea biroi (clonal raider ant): 105276124
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Entry
105276124 CDS
T05778
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04120
Ubiquitin mediated proteolysis
obo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105276124
04120 Ubiquitin mediated proteolysis
105276124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105276124
Enzymes [BR:
obo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105276124
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
U-box type E3
105276124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
105276124
NCBI-ProteinID:
XP_011331792
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All DBs
Position
9:complement(351901..358320)
Genome browser
AA seq
1112 aa
AA seq
DB search
MSELSQEEMRKRRLARLAGLNTNNTAASSSTTTAPISPSTPGPSKAFAGSMISPSIQQQL
QRVDVPMEVEESSDKQCNSSGIDVDSGIENMEVDESDRKDSIPRSRTTSSSIEVTTDNIH
AVISRVLCISWKSSAEGSCRMYLPQTAEYTQKQRQLDFSDIINQALMEVLCMFSRGEDPL
KDITVDMSSDREDSPNSQTSPLLSPVVTLPSYQLPAMPLPIGNKSSQPKSLTYLLDCYSR
IAIEERNHPKRSSIPPLSDVLTVLRMQCVQYSSLVLQGLVGICETSLVPMCTTHLLYPIL
SQGLPRGYLHELVARTHTNPSVFNKIFNPVLQGLYLSMQQASLVGNTHRRPIEALEELIE
IRCGPSGNIRPICRLITNQIQFLPDVMTPAAGREFTRTSFLGPFLSVSVFAEEQPKVAEK
FFSGNPLTDKSVNLTLQQELESTRTSLHKMFHAILANSNCRDVTLAYLAALLRHNEKRAQ
IQTEEFTLAGDGFMLNLLSVLQMLSVKIKLETVDPLYPFHPSSFIEIKNDTRLKLTSQEV
ADWQKHLEKTHKWTEAKFPTQCWFLTLHCHHIALLPALQKYQRKLRALRDLQKMLDELQA
TEPQWKDSPFAEHNKDLIKQWKQQLKRLVKSKSCADAGLIDPVLLRRCLHFYISVAEVLL
SLLTQTTPGPGLLPELPLSQEVTCKFTALPEWYVEDIAEFLLFTLQFCPGVVANNMDNSL
ITWLLVVVCTPHCIRNPYLIAKIIEVLFVINPSVQGRTETLHDKVMAHPISKTLLASYLM
KFYTDVETTGSSSEFYDKFSIRYHISLILKSMWDSPIHRASIVNESNNGKQFVKFVNMLM
NDTTFLLDESLESLKRIHEVQELMSDTSAWAALAQEQQQSRTRQLAADERQARSYLTLAK
ETVAMFHYLTVDIKEPFLRPELVGRLCAMLNFNLQQLCGPKCKNLRVRKPQKYGWQPRTL
LSQLVDIYLHLDCDNFAAALASDERSFCKELFTDAASRLERSAIKTTTEIERFIALAERA
AIIARDNRARDADYGDAPEEFRDPLMDTLMEDPVKLPSGIVMDKAVIIRHLLNSATDPFS
RQPLSEDMLTPMLDLKERISVWKQQKKKSTNI
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagctgagccaggaagaaatgaggaagaggcggttagcccgtctagcaggtttg
aatactaataatacagctgctagttcgtctaccactactgctccaatttctccaagtact
ccaggaccatcaaaggcatttgcaggatcaatgatatcgccatcgattcagcaacagtta
cagcgtgttgatgtaccgatggaagtagaagagagtagcgataagcaatgcaacagttct
gggatagatgtggattccgggatcgaaaatatggaagttgatgaatctgacaggaaagat
tcaataccgagatcacgtacaacgagttctagcatagaagtcacaacagataacatacat
gctgttatatcacgtgtcctgtgcatatcatggaagagttctgcggaaggcagctgccgc
atgtacctgccgcaaacagcggaatacacacaaaagcagaggcaattggattttagcgac
atcatcaatcaggccttgatggaagttttgtgcatgttctcgagaggggaagaccctttg
aaagatattacggtggacatgtcgtcagatcgtgaagatagtcccaatagccaaacgagt
cctttgttaagtcccgtcgtgactctcccatcttaccagttaccggccatgccgttgccc
ataggcaacaagtcgtcgcaaccgaaaagcttaacttatttattagactgttactcgaga
attgcaatcgaggaaagaaatcatccgaagcgatctagcataccgcccctgtccgacgtg
ttgacggttttgaggatgcagtgtgttcagtattccagcctcgttttacaagggctggtt
ggcatttgtgagacttcactcgtacccatgtgcaccactcatcttctgtatccgatatta
tcacaaggcttaccacggggttatctccacgaactcgtggctaggacacatacgaatcca
agtgtatttaacaagatattcaacccagtcctccaaggcctgtatctctcaatgcagcaa
gcaagtttggtcggcaatacgcatagaagaccgatcgaggcactggaggagctgatagag
atccgttgtggaccgagcggcaacatacgtccgatttgccgtttgatcacgaatcaaatt
caatttttgcccgatgttatgacgccagctgccggtagggagttcaccaggacctcgttc
ctggggccgtttctttcggtgtcggtgttcgccgaggagcagcctaaagtggcggagaag
tttttcagtggcaatcccctcacggacaaatcagtgaatctgacgttgcagcaagagttg
gagagcaccagaacatcgttacacaagatgttccacgcgatactcgcaaacagcaattgc
cgtgacgtcaccctggcgtatctggcagcgttgctgcgccacaacgagaaacgcgcgcag
atacagacggaggagttcacgctggccggtgacggattcatgttgaatctgctgtcggtc
cttcagatgctttctgtaaaaatcaagttggagaccgtggatcctctgtatccgtttcat
ccctccagtttcatcgagatcaagaacgacacaagactgaaactcacgtcgcaagaggtt
gcggattggcagaagcatttggagaagacacataagtggacggaggcgaaattcccaact
caatgttggttcctcacgctgcactgtcaccacatcgcgctgctaccggcgctgcagaag
tatcagaggaagctgcgggcgttgcgcgacttacaaaagatgctcgacgagctgcaagcc
acggaacctcagtggaaggacagtcccttcgcggaacacaataaggacctgatcaagcaa
tggaaacagcagttgaagcgattggtcaagtctaaatcgtgcgcggacgcaggtttgata
gatcccgtcctgttgagaagatgcttacacttttatatatccgtggcggaagttctgcta
agtcttttgacgcaaactaccccgggccccggtcttcttcccgaacttccgctatctcaa
gaagttacgtgcaaatttactgcactaccggaatggtacgtggaggatatagcagaattc
ttgttgttcacgctgcaattttgtccaggagtagtggcaaacaatatggacaactcgctt
atcacttggttactggttgtcgtgtgtacgccgcattgtatacgaaatccgtatttgatc
gcgaaaattatcgaagttctctttgtgataaatcctagtgttcaggggagaacagagact
cttcatgataaagttatggcacatcccatatcgaagacacttctggcgtcatatctgatg
aaattttataccgacgtcgagactactggctccagctccgaattttacgacaagttctca
atacgttatcacataagtctgatcctgaagtcaatgtgggacagcccgatacatcgcgca
tccatcgtcaatgagagcaataacggcaagcaattcgtcaagttcgttaacatgctaatg
aacgacaccaccttcctgctcgacgagagcttggaatccctaaaacgtatacacgaggtt
caagaactcatgtcggacactagtgcgtgggccgcgctcgcccaggagcaacagcagtcg
cgaacgaggcagttggcggcagatgagagacaagccaggtcctatcttacactagccaag
gaaacggttgccatgtttcactatttgacggtcgacattaaagagccgtttctacggccg
gaactggtcgggcgattgtgtgccatgctaaatttcaatttgcaacagttgtgcggacct
aagtgcaaaaatctgagagtgcggaaaccgcagaagtacggatggcaaccaaggacgtta
ctcagtcaattggttgacatatacttgcatcttgactgtgataatttcgcggccgctttg
gccagtgatgaacgctcgttctgtaaagagttgttcaccgacgctgcgagcagactagag
cggtctgcgatcaagactaccacggaaatcgagaggttcattgcccttgcagagcgtgca
gctataattgcgagggacaaccgcgcacgagatgcggactacggtgacgcccctgaggaa
ttccgcgatccattgatggacactcttatggaggacccggtcaaactaccatctggtatc
gttatggacaaagcagttatcattaggcacttactcaatagtgctacggatcctttcagt
cggcagccactcagcgaagacatgctcactccaatgctcgacttgaaagaaaggatatct
gtgtggaaacaacagaagaagaaatcgacaaatatataa
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