Ooceraea biroi (clonal raider ant): 105276138
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Entry
105276138 CDS
T05778
Name
(RefSeq) DENN domain-containing protein Crag isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obo04131
]
105276138
Membrane trafficking [BR:
obo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
105276138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR
PPR_long
PPR_3
Motif
Other DBs
NCBI-GeneID:
105276138
NCBI-ProteinID:
XP_011331814
LinkDB
All DBs
Position
9:complement(439645..450619)
Genome browser
AA seq
1606 aa
AA seq
DB search
MDERRVADYFVIAGLPGQDDELSQDNESNNKLEDWCQEGTHLKDMHMPPPITDLAVIFPA
LGEHCPEGYTLLEQTVSGFPADLNHGSLRTNECYLCYRRGRDKPPLVDIGVIYDGKERIM
QDAEMVLETPKGYVANVNNSTSKIFVTYRRASRKMPCNSLVVTDICVILTNKGESPPHAF
CVINKNLNKGMLGSDVFLCYKKSMNRANLISFKPAILYKYPMADYNSFVFPNSVAMFCLP
MGATIECWPKVACKPKPVFSTFVLTVADAAQKIYGSAITFYEELQLETDTANCKNNLEIM
DTTDENDRNSAENIEITKNKPQVKMKIFKRSGILKKLNILQLEKLQYTDPASQSLNISKS
ICILSHWPFFDTFEKFLVFLHGMVNGKPQSVPIEKYISYFLCDIPFPSPQRPRILVQLSS
QNRLILTQPEDLALPRSGASFRQLLINLGPDNCLLILLLILTEQKILVHSLRPDVLTSVS
EAIAMILFPFKWQCPYIPLCPLGLAEVLHAPLPFLIGVDSRFFDLYDPPSDVNCVNLDTN
NIAICDDKKYLNVKLLPKKAARQLRNWLELLSSKIISWGKTNCSQKDRGDEDFSVDREFQ
QKRREQALELEIQDAFLRFMATILKGYRSCLLPITKAPTVGTTDPTSLFNIQAFLRSRDK
AHAKFYTMLVRTQMFIRFIEERSFVSDMDMAGLAFFDECTERVEEENVTLLELDESQHSE
RTVFIPPPEAGTNQTPLIYKSFKLNPDLMRPQKNFCLRNPSLSAFGMVPGSPMARRTKHE
IKVAQRMARKQAAMPDRWGKCLLGTCYSLWFLHLPAMLQVSSQPAAILHQAYELLVKMQK
LRLDPMEEVCYRAMMQLCGVYGQPVLAVKLLFHMKRSGVQPNALTYGFYNKAVLEATWPS
DMTNSSQLMWNKLRNVIVGAALFKKAGKKSARRRLSSNVDFLTADKIEGMEHALSRSSLD
SSHSQDTEAAHSDSTKGSSVSDLPGFGSFELKAKLLRQNSIVKDQTTLNMLQSDELDHTP
SNPRLTRSVESPLKSPIRTPVTENDPLGALINDETPIVSPSEENDSNCSTSTLTVLNNTT
EERPGGPLLFRSNILPRSATFHQAVDESGMTVGGHLQRSETMPHSVAQQGEQEREKERLE
ISSLWSQNKDSVTSSLSSIGSSLKLSFGRYSTGGLAFAKNKDLISSNQLIESLSLSSYIS
PSSLTGKKSNEIILGGLNSLKSAATTVVKKFDEIKEAISATSTPVKIKEREQKLAYGISH
ESLDSLTDGSIQDRNEISTRASVGDGNLDLCSLYELAECLYPKGTRELEERLAIELVLSS
ASRCHHCAAILYDEEIMAGWQPEDSNLNTVCQYCDKATVPLLTVTILDYRCEASEKNSDP
LMGALVELLDRPKESLEPITVPYLNPLVLRKELESVLSQEGDICLTKHRFIQEHPIVYWN
LIWYFERINLTSNLPDLWLSNDKSSELQRTAGSVGVRTMWDNERLHMDRLPMYLQWKLNS
TEDRTLMQTVITYVRCNDLAEPIIRVALERSKHQSTDHPFSIYRDILFLAFTVLGRTNID
QGVFDREYSLSLEKFSENEEKLLHKIDAPPTMMSVYCRYYFKQLNV
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagaagagtagcagattattttgttatcgctggtttacctggtcaggacgac
gagcttagccaggataatgagagtaacaacaagctggaggactggtgtcaggaggggaca
catctcaaggacatgcacatgccacctcctatcacagatctcgctgtgatattccccgcg
ctgggtgaacactgtcctgagggatatacattgttagaacagactgtatcgggtttccct
gcagatttgaatcatgggagcctacgaacaaatgagtgttatctgtgctacagaagagga
cgggacaaacctcctttagttgatattggtgtgatatacgatggaaaggaacgtataatg
caggatgctgaaatggtactagaaacccccaaaggctacgtggcaaacgtgaataattct
acttcaaagatttttgtaacgtacagacgggcgagtcggaagatgccttgcaattctctt
gtcgttacggacatatgtgttatattgacgaataagggggagagtccgcctcacgcgttc
tgcgttattaataagaatttgaacaaaggaatgttaggcagcgatgtgtttttatgttac
aagaaatctatgaatcgcgccaatctgatatcatttaaaccagcaatactctacaagtat
ccgatggccgactacaacagtttcgtctttccgaattctgtcgcaatgttttgtctacca
atgggtgcgactatagaatgttggcctaaagtagcgtgtaaacccaaaccagtattttcg
acgttcgtcttgaccgtcgcggacgctgctcaaaagatatacggttcagcaataacgttt
tacgaggagcttcagctggaaacggacaccgcaaattgcaaaaacaatctggaaatcatg
gatacgactgacgagaatgacagaaacagtgcagaaaacatagagataactaagaacaag
ccgcaagtgaaaatgaagatattcaagagatctggcatactaaagaaacttaatatactg
cagctggagaagttgcagtacacggatccggcgagtcagtcgctgaatattagcaagtcc
atatgtatattgtcacattggccattcttcgacacgttcgaaaagttcttggttttcctg
cacggcatggtgaacggtaaaccgcagagcgttccaatcgagaagtacatctcctatttt
ttatgtgatataccatttccgagtccgcaacgcccgaggatcctggtacagcttagcagt
cagaacagactgatcctgacgcaaccggaggacttggctctgcctagatcgggcgcaagt
ttcaggcaactactgataaacctcggacccgacaactgtttgctaattttgttgttgata
ttaaccgagcagaaaatactggttcattctttacgcccggacgtacttacctcagtaagc
gaggctattgccatgattctgtttcctttcaagtggcaatgtccttatataccgttgtgt
cctctaggtttagcggaggtgttgcacgcaccattaccgtttctgattggtgtagactcg
aggttctttgatttatacgatcccccttctgatgtcaactgcgtgaatttggatactaat
aacatagccatttgcgatgataaaaaatacttgaatgtaaaactgttacctaaaaaggca
gccaggcagctcagaaattggttggagctcctatcctcgaaaatcatttcctggggaaaa
accaactgctcccaaaaagatcggggagacgaagattttagcgtggacagagaatttcaa
caaaaacgaagagagcaagctctagaactcgaaatacaggacgctttcctaagatttatg
gccacaattctcaaaggatatcgaagttgtttattaccgattacgaaagcacctaccgta
gggacaacggatccgacgagtttattcaatattcaagcatttttgaggagtcgcgacaaa
gctcacgctaaattttacaccatgctcgtcagaacacaaatgtttatcagatttatagaa
gagaggagttttgtatctgacatggatatggcaggattagcgtttttcgatgagtgtacg
gaacgagttgaggaggaaaatgtaactctcctggaactggatgaatctcagcacagcgag
cgtacagtatttataccgccgcctgaggcagggacaaatcaaacaccactaatatacaag
tcattcaaactgaatccagatctgatgaggcctcagaagaacttctgtttgagaaatcca
tctttaagtgcctttggtatggtacctggaagtcctatggctcgtagaacgaagcacgaa
atcaaagttgctcaaaggatggcccgaaaacaagctgcgatgccagacagatggggcaaa
tgtctacttggtacgtgttacagtctttggtttttgcacttgccagctatgttgcaagtt
tccagccaacccgctgcgattctgcatcaggcttacgaactattagtcaagatgcagaaa
ttacgtcttgatcctatggaagaggtatgctatagagcgatgatgcaactttgtggcgtg
tacggacaaccagttttagctgtaaagctgctgttccacatgaaacgcagtggcgttcaa
cctaatgctttgacatacggattttacaacaaggccgttctcgaagcaacatggccttcc
gatatgacgaattcgagtcaattgatgtggaacaagctgcgaaatgtcattgttggtgcg
gctttgtttaaaaaggctgggaagaagagcgcccgcagacgattgagttccaatgtggac
tttttgaccgccgataagattgaaggcatggagcacgcgctctcccggtccagtctcgac
agttcgcattctcaggacactgaagctgcgcacagtgattctaccaaaggcagttctgta
tcggacctacctggattcgggtcgttcgaactaaaagctaaactcctgcggcaaaacagt
atagtaaaggatcagacaacattaaatatgttacagtcggacgaactggatcacacacca
agtaacccaaggctaacgcgcagtgttgaatcaccattaaaaagtcccatacgcacacca
gttacggaaaatgacccattgggtgctctcattaatgacgaaacaccaattgtgtcacct
tccgaggagaacgactcaaattgctcaacaagtactttaaccgttttaaacaatacgact
gaagagagaccaggaggaccgctcttatttagaagcaatatcctcccacgtagtgcaacc
tttcatcaagcggtagatgaaagtggcatgacagtgggcgggcatttgcagaggagtgag
acgatgcctcactccgtggcacaacaaggggagcaggagagagaaaaggagagactggaa
ataagcagtctttggtcgcaaaataaggatagcgtaacgtccagcctctctagcatagga
tctagtcttaaacttagtttcggacgatactccacgggtggattggcgtttgccaaaaat
aaggatttaatatcatcgaatcaacttattgaatctcttagtctctccagttatatcagc
ccatcgagtttgacaggcaagaaatcgaacgaaataatccttggtggtctaaacagtttg
aaatctgccgcgactaccgtcgtgaagaaatttgacgagataaaggaggccatctcggcg
acgagtacaccagtaaaaattaaggaacgtgaacaaaagttagcttacggcatatcgcac
gaatctctcgattcgcttactgacggatccatacaagatcgaaatgagatttccacaaga
gcatcagtaggtgatggaaacttggatctgtgttcactgtacgaactcgcagaatgcctg
tatccaaagggcactagagaattagaggagcgtcttgccatcgaacttgtactctccagt
gccagcaggtgccatcattgtgccgccattctgtacgatgaagagattatggctggctgg
cagccggaggactccaacttgaacacagtttgccaatattgtgacaaggctaccgtacct
ctcctcacggttacgatactggactacagatgcgaagcaagtgagaaaaatagcgatcct
ctaatgggggcattggtcgaattgctcgatcggccgaaagaatcgttggagccgataacg
gtaccgtatctgaacccattagttctgagaaaagagttggaaagcgtgctgagtcaagag
ggggacatctgcctcaccaagcacaggtttattcaggagcatccgatagtctattggaat
ctgatatggtactttgagaggatcaatttaacgagcaatctgcctgatctctggctgagc
aacgataagagttcggagcttcaaagaactgcgggttcagtgggcgttagaaccatgtgg
gacaacgagcgactgcacatggatcgtttgcctatgtatctccaatggaaattaaattct
acggaggatagaacattgatgcagacagtgataacgtatgtccgttgcaacgacttagcg
gaacctatcataagagtggccttagaaagaagcaaacatcagtcgaccgatcacccgttt
tctatatacagggatatcctgttcctggcatttactgtactcggaaggacgaatatcgac
caaggcgtcttcgacagggaatacagtttgtcgctggagaaattctcggaaaacgaggag
aagctattacataaaattgacgcgccgccgacgatgatgtcggtgtactgcaggtattat
ttcaagcaattgaacgtttga
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