KEGG   Ooceraea biroi (clonal raider ant): 105276191
Entry
105276191         CDS       T05778                                 
Name
(RefSeq) THO complex subunit 2 isoform X8
  KO
K12879  THO complex subunit 2
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03013  Nucleocytoplasmic transport
obo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105276191
  09122 Translation
   03013 Nucleocytoplasmic transport
    105276191
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:obo03019]
    105276191
   03041 Spliceosome [BR:obo03041]
    105276191
Messenger RNA biogenesis [BR:obo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105276191
Spliceosome [BR:obo03041]
 Complex C
  Other components
   EJC/TREX
    105276191
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105276191
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2 CbtA_toxin
Other DBs
NCBI-GeneID: 105276191
NCBI-ProteinID: XP_011331922
LinkDB
Position
9:744028..753680
AA seq 1418 aa
MASKVWHAELWKSWDKHGRNDFFKLFKHKFKEGNAPEWRRGLYELISNGVHGNIKKDSVV
QTLGELTNFDSAVPSVIVDIFTLIDAETHNEERNNFYYIVKESEKFLTDRILKERLEIET
LQDVGTLKNKNFQSKFIKVKTKLYYKQRKFNLFREESEGYSKLIVELNQERLDSEVASTL
EIVKSLIGYFNLDPNRVLDILLETFENRSQDDALFIPLIRSYMSDQQVLCEVLGFKYCST
INATPFSLQKVTALMLQHGVIKLDDILPWLVPDDKTIISDHEQAMKQAKEYVRKLSVIST
KDKEDVEEKDNQQDKYASNQKFGLCEALLEIGAWEVAQSLFNRLPEYCLADQRPIALALC
KMIQALVEPVYRKHCIVSPKLPGRKVPPLKSSLAPPLMHNLEDIHNHLLPMLIVLGPNLH
HDPILMYKVMRLCHTVIKHCPLDASKQPLNKNCNLYYDVLTILDVALLPSLSFMDCNCCV
AEEMWNILKYYPYQNRYCLYARWKNDTPLQHAALLRKRADAQKKIKSIMKRVSKETIKPV
GRSIGKLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALAGAD
RDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKEIVQ
KMAGIEAAEEMTSDQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKEALAEHDLAVALCL
LMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIHSML
QDNHIHADVAFFLARPMFAHAINIKYDALRKADPNYKKMSTSIKQLKYAEAAQTVMAPVA
QSVRPLHPLKVWEDISPQFLVTFWSLSMYDLYVPVESYQREINKLKQLAAQTADSKDMNV
SKGKKEQERYTTLIEKLQDEKRKQDEHVEKVFAYLRQEKDTWFLSRSAKSAKNETITQFL
QLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEANR
YGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVCHK
WHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKVREEERGQR
QDLHVLATSYSGQLKAKTPSMIRESDFHHVGDKTGKTQDTTNNDSNEKVSNGVAAKEINN
GDTRPEKENKEQREKRSSSNQTHHNINSLNSESSEKIRKKEDAKDVSETKEKYVKKEEVK
DDEGLDKKDRKYYKEEHYYSGSVDNLDRDLSSVSNSSASSGPTQEGPDRDAKRRKVESTP
KQEGRRAEAVLDKKERSSKGKTRDEQKELRREKKQGRKRQDRTEESVATTEQKRRKDDER
AKGAHQNGDIPEHREKHHYNKLIKTSTSSTLKGRNGRQ
NT seq 4257 nt   +upstreamnt  +downstreamnt
atggccagcaaagtatggcatgcagaattatggaagtcatgggataagcatggaagaaac
gatttcttcaagctattcaagcacaaatttaaggaaggcaacgcaccagaatggagacga
gggttatacgagttaatatcaaatggggtccatgggaacataaaaaaggacagtgtggtt
cagacattaggtgaactgacgaattttgatagtgcagtaccatcggtaatagtagacata
tttacgttgattgatgcagaaactcataatgaagaaagaaacaacttttactacattgta
aaagaatcagagaagtttttgacagatagaatattgaaagaacgtctagagattgaaact
ttgcaagatgtggggacactgaagaacaaaaatttccaatcgaaattcataaaagtgaaa
acgaagttgtattacaagcagaggaaatttaatctatttcgcgaagaaagcgagggctat
tctaagcttattgtggaattaaatcaagaacgtctggacagcgaagtggcttcgacgttg
gaaatagttaaatctcttatcggctatttcaatcttgatcctaatagagtcctcgacatt
ttgctggaaacctttgaaaatcgatcgcaagatgatgctctgtttattcccttaatacgc
tcatatatgagcgatcagcaggttctttgcgaggtcttaggtttcaaatactgctccact
atcaacgctacgccgttctcgctgcaaaaggttaccgcgcttatgctacagcatggcgtg
attaaattggacgatatattaccttggctagtgccagatgacaaaacaatcatatcggac
catgagcaggcgatgaagcaagccaaggagtacgtgcggaaattgagcgttatctcaacg
aaggataaggaggacgtggaagagaaggataatcaacaagacaaatatgcaagcaatcaa
aaatttggattatgcgaagcccttctggaaattggagcttgggaggtggcgcaaagctta
ttcaatcgtttgccggaatattgtcttgcggatcagcgtcccatagctttagcgttatgc
aaaatgatccaggctctcgtcgaacctgtgtacagaaagcactgtatcgtttccccaaaa
ttgccgggccgtaaagtgcctccgttgaaaagctccctcgcgccgccattgatgcacaat
ctggaggatattcacaatcatttgttaccaatgctgattgtgctcggtccgaatctgcat
cacgatcccattctgatgtataaagtgatgaggctgtgtcacaccgttatcaagcactgt
ccgctcgacgcgagcaagcagccgttgaacaagaactgcaacctgtactacgacgtgctg
acgattcttgacgtcgcgctgctgccctcactctccttcatggactgtaactgctgcgtc
gccgaggaaatgtggaacatcctcaagtactacccttatcagaaccgttactgtctgtac
gcgcgctggaagaacgacacgccgctgcagcacgccgcgctgctgcggaaacgcgcggat
gcccagaagaaaatcaagtcgatcatgaaacgcgtgagcaaggagacgatcaagccggtc
ggccgttctataggcaagcttacgcattcttcgccaggtgtgctgtttgattatgtcctt
atacagattcaactgtatgacaacctcataggacccgtagtagactccttaaaatatttg
acaaacatttcgtacgacgtattaggatattgtcttgtggaggcactagcaggtgctgac
agagatagatttaagcacgacggcaccagtatatccttgtggctgcaatctctagcatct
ttctgcggagcgatatttaagaagtataacatcgaattaacagggttgttacagtacgta
gcaaatcaacttaaagctcaaaagagcctagatctattaatattaaaagaaatagtacaa
aagatggctggcatcgaagcagccgaggaaatgacgtccgatcagttggacgcaatggca
ggcggagatctgttaaaaaatgaggccggttacttcagtcaagttcgcaacacaaagaaa
tcctcgcagcgtttaaaagaagctctcgccgagcacgatctcgcggtcgctttgtgtttg
ctgatggcgcaacaaaagcattgcgtcgtttacagggaaacggataaatctcatctgaaa
cttgtcggcaagttgtacgatcagtgccaagatacgttggtacaatttggtacgttcctg
gggtccaccatgacggtggatgagtacgtggaacggttgccctcgattcactctatgctc
caggacaatcacatacacgcggatgttgcgtttttcctggcgaggccgatgttcgcgcac
gccataaatataaagtatgacgcccttcgtaaagctgatccaaattacaagaaaatgtcc
acgagtatcaaacaattaaagtatgcagaagccgcgcaaaccgttatggcacccgtcgcc
caatctgtcagaccattgcaccctctaaaagtgtgggaagacatatcgccacaattctta
gtcaccttttggtctttgtcaatgtacgatttgtatgtgccagtggaaagttatcaaaga
gaaatcaataagctgaagcagctcgcggcacaaaccgccgattccaaagatatgaacgta
agtaaagggaagaaggaacaggagagatatactactcttatcgagaagctgcaagacgaa
aaaagaaagcaagacgaacacgtagagaaagtgtttgcgtacctgagacaagaaaaggat
acttggtttttgtcgcgtagcgccaaatctgcgaagaacgagacgataacgcaattctta
cagttgtgtctattcccgcggtgtacattcacaactgtggacgctatgtactgtgcgaaa
tttgtacatactattcactccctgaagactgcaaatttttcaaccctgctttgttacgat
cgccttttctgtgatattacatattcagtcacatcgtgcaccgaaaacgaagcgaatcga
tatggcagatttttgtgtgccatgctggagactgtgatgagatggcattccgagaaggcc
atatttgataaggaatgcagcaattatcctggatttgtaaccaagtttcgcgtaagcaat
cagttttccgaagcaaacgatatggtcggatttgaaaattacagacacgtatgtcacaag
tggcactacaagatcacaaaggctattgtggtatgcctagattctaaagattatgtgcag
ataaggaattccttgataatattaatcaagatattgccgcactttcctgtcttggcaaaa
ctctcgcagattcttgagaggaaggtggagaaggtaagagaggaagagcgtggccagcgt
caggacttacacgtgcttgctacgtcgtatagcggccagctgaaagccaagactcccagt
atgatacgtgaatccgactttcatcacgtgggcgacaagactggaaaaacacaagacact
acaaacaatgactcgaacgaaaaggtcagtaacggcgttgctgcaaaagagattaataac
ggcgatactcgcccggaaaaggagaataaggagcaacgagaaaaacgaagctcatccaat
cagacgcatcacaatatcaattctttgaacagcgaaagctcagaaaaaatccggaaaaaa
gaggatgctaaagatgtgtcagaaacaaaagaaaaatacgtcaagaaggaagaagtaaaa
gacgatgaaggattagataaaaaggatcgcaagtattataaggaagagcactattacagc
ggtagtgtagataatttagatcgagatctttcaagtgtctcaaatagtagtgctagctca
ggccccacgcaagaaggtcctgacagagatgcaaagaggagaaaagtagaaagcacccca
aagcaggaaggaaggcgtgcagaagctgttctcgacaagaaagaacgttccagcaaggga
aaaacgcgtgacgagcaaaaggaacttcgcagagaaaagaaacaggggcgaaagaggcag
gatcgaactgaggaatctgtagcaaccaccgaacagaaacggagaaaagatgacgaaaga
gccaaaggcgcacatcagaacggtgacattcctgaacacagagagaagcatcattacaat
aagttgataaagacgtctacttcgagtacattaaaaggacgaaatggacggcaatag

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