Ooceraea biroi (clonal raider ant): 105276191
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Entry
105276191 CDS
T05778
Name
(RefSeq) THO complex subunit 2 isoform X8
KO
K12879
THO complex subunit 2
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03013
Nucleocytoplasmic transport
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105276191
09122 Translation
03013 Nucleocytoplasmic transport
105276191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105276191
03041 Spliceosome [BR:
obo03041
]
105276191
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105276191
Spliceosome [BR:
obo03041
]
Complex C
Other components
EJC/TREX
105276191
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105276191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
CbtA_toxin
Motif
Other DBs
NCBI-GeneID:
105276191
NCBI-ProteinID:
XP_011331922
LinkDB
All DBs
Position
9:744028..753680
Genome browser
AA seq
1418 aa
AA seq
DB search
MASKVWHAELWKSWDKHGRNDFFKLFKHKFKEGNAPEWRRGLYELISNGVHGNIKKDSVV
QTLGELTNFDSAVPSVIVDIFTLIDAETHNEERNNFYYIVKESEKFLTDRILKERLEIET
LQDVGTLKNKNFQSKFIKVKTKLYYKQRKFNLFREESEGYSKLIVELNQERLDSEVASTL
EIVKSLIGYFNLDPNRVLDILLETFENRSQDDALFIPLIRSYMSDQQVLCEVLGFKYCST
INATPFSLQKVTALMLQHGVIKLDDILPWLVPDDKTIISDHEQAMKQAKEYVRKLSVIST
KDKEDVEEKDNQQDKYASNQKFGLCEALLEIGAWEVAQSLFNRLPEYCLADQRPIALALC
KMIQALVEPVYRKHCIVSPKLPGRKVPPLKSSLAPPLMHNLEDIHNHLLPMLIVLGPNLH
HDPILMYKVMRLCHTVIKHCPLDASKQPLNKNCNLYYDVLTILDVALLPSLSFMDCNCCV
AEEMWNILKYYPYQNRYCLYARWKNDTPLQHAALLRKRADAQKKIKSIMKRVSKETIKPV
GRSIGKLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALAGAD
RDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKEIVQ
KMAGIEAAEEMTSDQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKEALAEHDLAVALCL
LMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIHSML
QDNHIHADVAFFLARPMFAHAINIKYDALRKADPNYKKMSTSIKQLKYAEAAQTVMAPVA
QSVRPLHPLKVWEDISPQFLVTFWSLSMYDLYVPVESYQREINKLKQLAAQTADSKDMNV
SKGKKEQERYTTLIEKLQDEKRKQDEHVEKVFAYLRQEKDTWFLSRSAKSAKNETITQFL
QLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDRLFCDITYSVTSCTENEANR
YGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFENYRHVCHK
WHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKVREEERGQR
QDLHVLATSYSGQLKAKTPSMIRESDFHHVGDKTGKTQDTTNNDSNEKVSNGVAAKEINN
GDTRPEKENKEQREKRSSSNQTHHNINSLNSESSEKIRKKEDAKDVSETKEKYVKKEEVK
DDEGLDKKDRKYYKEEHYYSGSVDNLDRDLSSVSNSSASSGPTQEGPDRDAKRRKVESTP
KQEGRRAEAVLDKKERSSKGKTRDEQKELRREKKQGRKRQDRTEESVATTEQKRRKDDER
AKGAHQNGDIPEHREKHHYNKLIKTSTSSTLKGRNGRQ
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaagtatggcatgcagaattatggaagtcatgggataagcatggaagaaac
gatttcttcaagctattcaagcacaaatttaaggaaggcaacgcaccagaatggagacga
gggttatacgagttaatatcaaatggggtccatgggaacataaaaaaggacagtgtggtt
cagacattaggtgaactgacgaattttgatagtgcagtaccatcggtaatagtagacata
tttacgttgattgatgcagaaactcataatgaagaaagaaacaacttttactacattgta
aaagaatcagagaagtttttgacagatagaatattgaaagaacgtctagagattgaaact
ttgcaagatgtggggacactgaagaacaaaaatttccaatcgaaattcataaaagtgaaa
acgaagttgtattacaagcagaggaaatttaatctatttcgcgaagaaagcgagggctat
tctaagcttattgtggaattaaatcaagaacgtctggacagcgaagtggcttcgacgttg
gaaatagttaaatctcttatcggctatttcaatcttgatcctaatagagtcctcgacatt
ttgctggaaacctttgaaaatcgatcgcaagatgatgctctgtttattcccttaatacgc
tcatatatgagcgatcagcaggttctttgcgaggtcttaggtttcaaatactgctccact
atcaacgctacgccgttctcgctgcaaaaggttaccgcgcttatgctacagcatggcgtg
attaaattggacgatatattaccttggctagtgccagatgacaaaacaatcatatcggac
catgagcaggcgatgaagcaagccaaggagtacgtgcggaaattgagcgttatctcaacg
aaggataaggaggacgtggaagagaaggataatcaacaagacaaatatgcaagcaatcaa
aaatttggattatgcgaagcccttctggaaattggagcttgggaggtggcgcaaagctta
ttcaatcgtttgccggaatattgtcttgcggatcagcgtcccatagctttagcgttatgc
aaaatgatccaggctctcgtcgaacctgtgtacagaaagcactgtatcgtttccccaaaa
ttgccgggccgtaaagtgcctccgttgaaaagctccctcgcgccgccattgatgcacaat
ctggaggatattcacaatcatttgttaccaatgctgattgtgctcggtccgaatctgcat
cacgatcccattctgatgtataaagtgatgaggctgtgtcacaccgttatcaagcactgt
ccgctcgacgcgagcaagcagccgttgaacaagaactgcaacctgtactacgacgtgctg
acgattcttgacgtcgcgctgctgccctcactctccttcatggactgtaactgctgcgtc
gccgaggaaatgtggaacatcctcaagtactacccttatcagaaccgttactgtctgtac
gcgcgctggaagaacgacacgccgctgcagcacgccgcgctgctgcggaaacgcgcggat
gcccagaagaaaatcaagtcgatcatgaaacgcgtgagcaaggagacgatcaagccggtc
ggccgttctataggcaagcttacgcattcttcgccaggtgtgctgtttgattatgtcctt
atacagattcaactgtatgacaacctcataggacccgtagtagactccttaaaatatttg
acaaacatttcgtacgacgtattaggatattgtcttgtggaggcactagcaggtgctgac
agagatagatttaagcacgacggcaccagtatatccttgtggctgcaatctctagcatct
ttctgcggagcgatatttaagaagtataacatcgaattaacagggttgttacagtacgta
gcaaatcaacttaaagctcaaaagagcctagatctattaatattaaaagaaatagtacaa
aagatggctggcatcgaagcagccgaggaaatgacgtccgatcagttggacgcaatggca
ggcggagatctgttaaaaaatgaggccggttacttcagtcaagttcgcaacacaaagaaa
tcctcgcagcgtttaaaagaagctctcgccgagcacgatctcgcggtcgctttgtgtttg
ctgatggcgcaacaaaagcattgcgtcgtttacagggaaacggataaatctcatctgaaa
cttgtcggcaagttgtacgatcagtgccaagatacgttggtacaatttggtacgttcctg
gggtccaccatgacggtggatgagtacgtggaacggttgccctcgattcactctatgctc
caggacaatcacatacacgcggatgttgcgtttttcctggcgaggccgatgttcgcgcac
gccataaatataaagtatgacgcccttcgtaaagctgatccaaattacaagaaaatgtcc
acgagtatcaaacaattaaagtatgcagaagccgcgcaaaccgttatggcacccgtcgcc
caatctgtcagaccattgcaccctctaaaagtgtgggaagacatatcgccacaattctta
gtcaccttttggtctttgtcaatgtacgatttgtatgtgccagtggaaagttatcaaaga
gaaatcaataagctgaagcagctcgcggcacaaaccgccgattccaaagatatgaacgta
agtaaagggaagaaggaacaggagagatatactactcttatcgagaagctgcaagacgaa
aaaagaaagcaagacgaacacgtagagaaagtgtttgcgtacctgagacaagaaaaggat
acttggtttttgtcgcgtagcgccaaatctgcgaagaacgagacgataacgcaattctta
cagttgtgtctattcccgcggtgtacattcacaactgtggacgctatgtactgtgcgaaa
tttgtacatactattcactccctgaagactgcaaatttttcaaccctgctttgttacgat
cgccttttctgtgatattacatattcagtcacatcgtgcaccgaaaacgaagcgaatcga
tatggcagatttttgtgtgccatgctggagactgtgatgagatggcattccgagaaggcc
atatttgataaggaatgcagcaattatcctggatttgtaaccaagtttcgcgtaagcaat
cagttttccgaagcaaacgatatggtcggatttgaaaattacagacacgtatgtcacaag
tggcactacaagatcacaaaggctattgtggtatgcctagattctaaagattatgtgcag
ataaggaattccttgataatattaatcaagatattgccgcactttcctgtcttggcaaaa
ctctcgcagattcttgagaggaaggtggagaaggtaagagaggaagagcgtggccagcgt
caggacttacacgtgcttgctacgtcgtatagcggccagctgaaagccaagactcccagt
atgatacgtgaatccgactttcatcacgtgggcgacaagactggaaaaacacaagacact
acaaacaatgactcgaacgaaaaggtcagtaacggcgttgctgcaaaagagattaataac
ggcgatactcgcccggaaaaggagaataaggagcaacgagaaaaacgaagctcatccaat
cagacgcatcacaatatcaattctttgaacagcgaaagctcagaaaaaatccggaaaaaa
gaggatgctaaagatgtgtcagaaacaaaagaaaaatacgtcaagaaggaagaagtaaaa
gacgatgaaggattagataaaaaggatcgcaagtattataaggaagagcactattacagc
ggtagtgtagataatttagatcgagatctttcaagtgtctcaaatagtagtgctagctca
ggccccacgcaagaaggtcctgacagagatgcaaagaggagaaaagtagaaagcacccca
aagcaggaaggaaggcgtgcagaagctgttctcgacaagaaagaacgttccagcaaggga
aaaacgcgtgacgagcaaaaggaacttcgcagagaaaagaaacaggggcgaaagaggcag
gatcgaactgaggaatctgtagcaaccaccgaacagaaacggagaaaagatgacgaaaga
gccaaaggcgcacatcagaacggtgacattcctgaacacagagagaagcatcattacaat
aagttgataaagacgtctacttcgagtacattaaaaggacgaaatggacggcaatag
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integrated database retrieval system