Ooceraea biroi (clonal raider ant): 105276415
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Entry
105276415 CDS
T05778
Name
(RefSeq) polyubiquitin-A
KO
K08770
ubiquitin C
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04120
Ubiquitin mediated proteolysis
obo04137
Mitophagy - animal
obo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105276415
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105276415
04137 Mitophagy - animal
105276415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105276415
Ubiquitin system [BR:
obo04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
105276415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
105276415
NCBI-ProteinID:
XP_011332297
LinkDB
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Position
6:complement(1925916..1929786)
Genome browser
AA seq
991 aa
AA seq
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MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEAS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGACL
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcgtgaaaactcttactgggaagaccattacccttgaagtcgaagcttct
gacaccatagagaatgtcaaggccaagattcaagacaaggaaggcattcctcctgatcag
caacgtctgatcttcgctggtaaacaactcgaagatggcagaactctctccgactataac
atccagaaggaatctactcttcatctggttctgcgtctgcgaggtggaatgcagatcttc
gtgaaaacgctcacaggtaaaaccattactcttgaagtcgaagcttccgacaccatagag
aatgtgaaggccaaaatccaggacaaagaaggaattccgccagatcagcagcgtctgatt
tttgctggcaagcaactcgaagatggcagaaccctttccgactataacatccagaaggaa
tctacgctccatctggttctgcgtcttcgaggtggaatgcaaatcttcgtaaagacactg
acaggcaaaaccatcaccctggaagttgaagcttcagacaccatagaaaacgtaaaggct
aaaatccaggacaaagaaggcattcctcccgaccagcagcgtttgatcttcgctggcaaa
cagctggaagatggcagaaccctttccgactataacattcagaaggaatctacgctccat
ttggttctgcgtcttcgaggtggaatgcagattttcgtgaagacactcacgggcaaaacc
atcaccctggaagtcgaagcgtcggacaccatagaaaatgtgaaggccaaaatccaggac
aaagaaggcattcctcccgaccagcagcgtttgatcttcgctggcaaacagctggaagat
ggcagaaccctttccgactataacattcagaaggaatctacgctccatttggttctgcgt
cttcgaggtggaatgcagattttcgtgaagacactcacgggcaaaaccatcaccctggaa
gtcgaagcgtcggacaccatagaaaacgtaaaggctaaaatccaggacaaagaaggcatt
cctcccgaccagcagcgtttgatctttgctggtaaacagctggaagatggcagaaccctt
tccgactacaacattcagaaagaatctacgctccatctggttctgcgtcttcgaggtgga
atgcagattttcgttaagacactcacgggcaaaaccatcaccctggaagtcgaagcgtca
gacaccatagaaaatgtgaaggccaaaatccaggacaaagaaggtattcctcccgaccag
cagcgtttgatcttcgctggcaaacagctggaagatggcagaaccctttccgactataac
attcagaaggaatctacgctccatttggttctgcgtcttcgaggtggaatgcagattttc
gtgaagacactcacgggcaaaaccatcaccctggaagtcgaagcatcggacaccatagaa
aatgtgaaggccaaaatccaggacaaagaaggtattcctcccgaccagcagcgtttgatc
tttgctggtaaacagctggaagatggcagaaccctttccgactacaacattcagaaagaa
tctacgctccatctggttctgcgtcttcgaggtggaatgcagattttcgtgaagacactc
acgggcaaaaccatcaccctggaagtcgaagcatcggacaccatagaaaatgtgaaggcc
aaaatccaggacaaagaaggtattcctcccgaccagcagcgtttgatcttcgctggtaaa
cagctggaagatggcagaaccctttccgactataacattcagaaggaatctacgctccat
ttggttctgcgtcttcgaggtggaatgcagattttcgtgaagacactcacgggcaaaacc
atcaccctggaagtcgaagcgtcggacaccatagaaaacgtaaaggctaaaatccaggac
aaagaaggcattcctcccgaccagcagcgtttgatctttgctggtaaacagctggaagat
ggcagaaccctttccgactacaacattcagaaagaatctacgctccatctggttctgcgt
cttcgaggtggaatgcagattttcgtgaagacactcacgggcaaaaccatcaccctggaa
gtcgaagcatcggacaccatagaaaatgtgaaggccaaaatccaggacaaagaaggtatt
cctcccgaccagcagcgtttgatctttgctggtaaacagctggaagatggcagaaccctt
tccgactataacattcagaaggaatctacgctccatctggttctgcgtcttcgaggtgga
atgcagattttcgtgaagacactcacgggcaaaaccatcaccctggaagtcgaagcgtca
gacaccatagaaaatgtgaaggccaaaatccaggacaaagaaggcattcctcccgaccag
cagcgtttgatcttcgctggtaaacagctggaagatggcagaaccctttccgactataac
attcagaaggaatctacgctccatctggttctgcgtcttcgaggtggaatgcagattttc
gtgaagacactcacgggcaaaaccatcaccctggaagtcgaagcatcggacaccatagaa
aatgtgaaggccaaaatccaggacaaagaaggtattcctcccgaccagcagcgtttgatc
ttcgctggtaaacagctggaagatggcagaaccctttccgactataacattcagaaggaa
tctacgctccatctggttctgcgtcttcgaggtggaatgcagattttcgtgaagacactc
acgggcaaaaccatcaccctggaagtcgaagcgtcagacaccatagaaaatgtgaaggcc
aaaatccaggacaaagaaggcattcctcccgaccagcagcgtttgatcttcgctggtaaa
cagctggaagatggcagaaccctttccgactacaacatccagaaagagtccacacttcac
ttagtcttacgacttcgtggaggggcttgcctttaa
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