Ooceraea biroi (clonal raider ant): 105276508
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Entry
105276508 CDS
T05778
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105276508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105276508
04121 Ubiquitin system [BR:
obo04121
]
105276508
03036 Chromosome and associated proteins [BR:
obo03036
]
105276508
03400 DNA repair and recombination proteins [BR:
obo03400
]
105276508
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105276508
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105276508
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105276508
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
105276508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_5
Ank_3
Ank_4
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
zf-RING_6
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
105276508
NCBI-ProteinID:
XP_011332486
LinkDB
All DBs
Position
6:616536..619257
Genome browser
AA seq
503 aa
AA seq
DB search
MDVSWTNTINALEDFVRVLLCEKCGSKPISPRRLTNCGHFFCYNCIKSAIKCVKCDVPVQ
PREMSPDHLVSGLIQHCDIIAEIIGERDLWNNTASTLNASFNTTVSQIIRPQKQSYISKN
IEKTNPKGETALHTACLRKNAEKVKLLLLAGANPNTKDNAGWTPLQEVVSYGQIEICKML
LDAGASPNISGYENKRPLHEAAKSDRIEEARLLLRHGADENLCDQYGKKPIDYCYSEEMR
QLLMDGSSRSLSTETSHVNQTLDKSFYAGNDKFVILASHLKLENKKLLCVTAAKHKFKTL
TTYRPGVTHVIVEANEHNVTKLTLDVLFTIVRGNWLLNSEWIQLAEYMDDISDMDLGLFE
VGGAPTHGIPKKARQNTEDQNPRLFNNCFFHFALQANTTYQIGDLQLTKDNLIKLVKEGE
GTVLMREPNPEDLNDMSQLIPFHIANDSSHPLHKCTHYVIYMPGKGEPLIKYNMPHIKSL
PLVWLIECIEKFTLINPVHLGLS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttcgtggacaaatacaattaatgcgttggaagattttgtgagagttttgctt
tgtgaaaaatgtgggtctaagccaatatctcccagaagacttacaaattgcgggcacttt
ttttgttataattgtatcaagtctgcaataaaatgtgtcaagtgtgacgtaccagtgcaa
ccaagagaaatgagtcctgatcatctggtatccggtctcattcagcattgtgatataatc
gcagagattattggtgaaagggatctatggaataatactgcaagtacactcaatgcatcg
ttcaatactacggtatcccagataattcgaccgcagaaacaatcttatataagtaaaaat
atagaaaaaacaaatccaaaaggagaaacagcattgcacactgcgtgcttaaggaaaaat
gctgagaaagttaaacttcttttgctggctggtgcaaatcctaatacaaaggataatgct
ggttggacaccattgcaagaagtagtcagttatggacagattgaaatatgtaagatgcta
ttagatgctggagcatcaccaaatatatcgggatatgaaaataaaagaccactacacgaa
gctgccaagtctgataggattgaagaagctagattattattgagacatggtgctgatgaa
aatttatgcgaccaatatggcaagaagcctatagattactgttactcggaggagatgcgt
cagctcttgatggatggatcatcacgatccttgtccacggagacatcgcatgttaatcaa
acgttagataaatcattttacgcaggaaatgataaatttgtaattcttgcatcacatttg
aaacttgaaaataaaaaattactttgtgtcacggccgcaaagcataaatttaaaactttg
accacgtacaggccaggtgtcacacatgtcatagtggaggcaaacgagcacaacgtcacg
aaattgacgctcgatgttttgttcacgattgttcgtgggaattggcttctcaacagtgaa
tggattcaactggcagagtacatggatgatatatctgatatggatcttggattgtttgaa
gtcggcggcgcaccgactcatggtatccccaagaaagcaaggcaaaatacagaggatcaa
aatccacgtctgttcaacaactgttttttccattttgctttacaagcaaatacaacttat
cagatcggtgatttgcaactgactaaagataatcttattaaacttgtgaaggaaggagag
ggaacggttctcatgagagagccaaatcctgaagatctaaatgacatgtcgcaactgata
ccttttcacattgcgaacgactcgtctcatcccttgcacaagtgtacacattatgttata
tatatgccaggcaaaggtgaaccgctcattaagtacaacatgccgcacatcaagagtcta
ccgctggtatggctaattgaatgcatcgagaaatttactctaatcaatccagttcacctg
ggactctcctaa
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