Ooceraea biroi (clonal raider ant): 105276527
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Entry
105276527 CDS
T05778
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105276527
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
105276527
TFIIIC, fungi type
105276527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_14
TPR_2
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_11
ANAPC3
ARM_TT21
TPR_9
ARM_TT21_4th
TPR_17
FAT
Motif
Other DBs
NCBI-GeneID:
105276527
NCBI-ProteinID:
XP_011332520
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All DBs
Position
6:480353..488275
Genome browser
AA seq
920 aa
AA seq
DB search
MESVADNACINVDDTEDDTTTEPMDLRRSSSAIDDLIVGEDDGTVAPVMIEELDESAACA
MNVDMNEFVETTALRIQEVTDICPLSPSRNLTKDTFDTEDQDTSLTADEEDRLTKQFLNG
ELTFSEYSSKMDRDVDLETTDMDDARRNMTIERSGVRKIVERKMHKPSNVQQVRQKRKRR
ILPPVLQGLMGEANLRYAKGEVNLAAQICMEIIRQVPSAPEPFQTLAMIYETDQPEKSLQ
FALIAAHLSPKDADQWIRLANLSLEGGDMKQAITCYSKAIQASPKDVGLYEARARLQEQN
GDRKAYLRGYAKLIHQLEAEDGECIVRYAKLLAKCHMEEGNNEQALEAMEVIFVKCPCLI
TLEEVNVMTELLIALKRFQKCLDVLTEYTGIRIRYRRSDTATERDRTATRDAARPEDVSD
GTTVDEIESCDVPDDVVVDLRTKLLVTLIELNHLQIADQLLPAFYKREDPETSGDLFLDV
AEALMGRKEFQRALLLLNPLVESRNFSLAAVWLRHAECWAACNDFDKAVNSYEAVRRLSP
QHLGAKLSLATLYEDSGLYDRAIEVLYQDPETETLDPDVTYRRTLLLFKVGRYDEYFSSG
MLLLSRHCANIRRKVELNAVARATGVRQRLESLQLHRLSCGEKLEDEDAPTFTDNAKPSE
KNEFLLFLQMCKLACRLSKYGLLQRISFTALTSKRFQKRNSHIIFLCLISCIHNKDSFYG
YNIVREFVRVCQRSNTWNLLNIIIQRAEDLRHNRFIMRLLGREDVFSYLHIMHANNCLVS
GTYKYALNGYISLFKVAPSALLALLIGVTQLQMACQKMSAKKNQLVIQALAFFKKYMQLR
ANGQQETYYNMARAFHQIGLLPSAIHFYKLVLDEDPGDLVKQHANLLDLRKEAAFNLHLI
YLQSENYLLARMYLENYITV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggttgccgacaacgcgtgcatcaacgtggacgataccgaggacgatactacg
acggaaccgatggacctgcgaagatcgtcatctgccattgatgacttgatcgtcggtgag
gatgatggcaccgtggcaccggtgatgatagaggaattggatgagagtgccgcttgcgct
atgaacgtggacatgaacgaattcgttgaaacgacagctctgcggatacaggaagtaacg
gatatctgtccgctgtcgccatcgcgaaatcttactaaggatacctttgacacggaggat
caggatacgtcgctcactgccgacgaggaggatcgtctgacaaaacagtttttgaatgga
gagttaacattcagcgagtattcgtccaagatggatcgagacgtggatctggaaacgacg
gatatggacgatgccagaagaaacatgaccattgaacggagcggtgtgcgaaagatcgtg
gaacgaaagatgcataagcccagtaacgtacagcaggtgcgccaaaagagaaagagacgc
atcttgccaccagtgttgcagggacttatgggcgaggcgaatctgcgctatgcaaaggga
gaggttaacctagctgcgcagatatgtatggagatcattaggcaagtaccaagcgctccg
gaaccgtttcagacgctggccatgatatacgagaccgatcagccggaaaagtcgctgcaa
tttgctctgattgccgcgcatctcagtccaaaggacgccgaccagtggataagactggcc
aacttgtcgctggaaggtggagatatgaaacaagcgataacgtgttactcgaaagcgatt
caagcgagcccgaaggatgtcggactgtacgaggcgcgagcgcgactccaggaacagaac
ggtgatagaaaggcgtatctgcgggggtacgcgaaactgatacaccaattggaggccgag
gacggcgaatgtatcgtgagatacgccaagctcttggccaagtgtcacatggaggagggc
aacaacgaacaggcgttggaagcgatggaggtcatctttgtcaagtgtccttgtctcatc
acgttggaggaggttaacgtcatgaccgaactgttgatagcgctgaagcgatttcagaaa
tgtttggacgtactgaccgagtacacgggcatccgtatacggtacaggagaagcgatacc
gcgaccgaacgagaccgaacggcgacccgtgacgcggcgaggcccgaggacgtgtccgac
ggtacgacggtcgatgaaatagaatcttgcgacgtgccggacgacgtggtcgttgacctg
agaacgaagcttctcgtcactctcatcgaattgaatcaccttcagatagccgatcagctt
ttacccgcgttttataagcgcgaggatcccgagacctcgggagatctctttctcgatgtg
gcggaagcgttaatgggcaggaaggagtttcagcgcgcgttgctcctgctgaatcccttg
gtggaaagtagaaatttcagtctggccgcggtttggctcagacacgcggaatgctgggcc
gcttgcaatgacttcgacaaagctgtgaactcctacgaggcggtccggcgattgtcaccg
cagcatctaggtgcgaaattatcgctggcaacgctttacgaggacagcggactttacgat
cgggcgatagaggttctctatcaagaccccgagactgagacgttagatcccgacgttacg
tatcgaaggaccttgctgctcttcaaagttggacgatacgacgaatacttttcctcgggg
atgttactgctctcgaggcattgcgccaacatccgacgaaaggtcgaacttaacgccgtg
gcgcgcgcgaccggtgttcgtcagcgcctcgagagcctgcaactccaccgtttgtcgtgc
ggggagaagctcgaggatgaggacgctccgacattcaccgacaatgcgaaaccgagcgag
aagaatgaattcttgctctttctgcaaatgtgtaaactcgcctgcagattgagcaagtac
ggtctcctccagagaatctccttcaccgctctgacgtccaagagatttcaaaagagaaac
tcccacatcatattcctctgtttgatttcctgtattcataacaaggactcgttctacggc
tacaacatcgtgcgagaattcgtacgtgtctgccaaaggtccaacacgtggaatctgctc
aacataatcatccagagagcggaggacttgagacacaacagattcatcatgcgattgctc
ggaagagaggacgtcttttcgtatttgcacatcatgcacgcgaacaactgtctcgtttcg
ggaacgtacaagtacgccttgaacggttacatatctctcttcaaagtagcacctagcgcg
ctgctggctctcctgataggtgtgacgcagctacaaatggcctgtcagaaaatgtcggcc
aagaagaatcaacttgtgattcaagcgttggctttcttcaaaaagtacatgcagttacgt
gccaacggccaacaagaaacgtattacaacatggcgcgagcgtttcaccaaattggtttg
ttaccgtccgcgattcatttctacaaattggtcctcgacgaagatccaggagacttggtc
aaacaacacgccaatctgttggacctgcggaaggaagcagcttttaatttacacctgatt
taccttcaatctgaaaattatcttctcgccagaatgtatctggagaattacataactgtt
tga
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