Ooceraea biroi (clonal raider ant): 105276565
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Entry
105276565 CDS
T05778
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105276565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105276565
03036 Chromosome and associated proteins [BR:
obo03036
]
105276565
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105276565
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105276565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
105276565
NCBI-ProteinID:
XP_011332597
LinkDB
All DBs
Position
12:complement(4468028..4479329)
Genome browser
AA seq
1922 aa
AA seq
DB search
MFGQTGNTSFSGFNTATQNSPFGQSAFGKPITTTSFGSGATPVFGSSNTSSLFSSKPTGS
TTGGLFGNTTTPPAFRQPTNTQPSFGGFGTTNTSTNLFGSQQNASTNLFGTSTGTSAFGQ
ANKPAGFSFGTTTGTNLFGQPQQNAQQTTPFGQASTTTSTNLFGTSTGFGSTTTTTVPTG
TVVKFTPVITTDSMSKNGISHSISARHCCIASMKEYESKSYEELRFEDYQVGRKGPQTGL
FGAPSQTSPFGSTTAGTSTAGTGFGSMAGGFGTTSQSGSSGLFGKPITNFGTPATTTTNS
FPFNSTPTTNLFGTNTQTKPFGTAAPTPLFGTSNTNPATGTGFGINAGQSTGFASAFGST
QPNQSIGLFNQNKSAFNIPSTSTSTGFTGFGQPATNNTTTPLFGNKTSTTGFGTTSTFGA
TAPSTFGTNTGFNSGSNTGSSLFNSSFKPAGQTSGFSFGATSTSSTGLGTNTGLSLGGGS
SLFGQQKPGSLFGNTGSNATFNNSGTFGSSTFGTNSNIMSGTGMGLLNGGITSNQAKTNG
SVPVHQQILALVSAPFGDSPLLKNLLPASGKTEELLKPTNPATKVLNSPQYRVTASKSPK
LKARVVSSVQLTKKSLFDGLEEEDPVLTEAFQPRPSAKRLVLRPKSATNSSIQSPVENGE
SATRNSITDNNNDKADTPNALHSNNIEVNNKENHIQDNQVANDRRSSVSWLKSTIPRRNK
IPDDELLEGQRSPFSGTNAPEEINNTVTELRPQNNISNTNHSDHTINSIEAQNSTLGDKS
SVNLTMHNTDSSQEPGENSFSMLQSNWNANLAKVVLRRVGYYTIPPLDKLDDFVCGETCI
VPNFTVGREGYGNVYFPDSFDIYGLNLDEIVHFRHKEVIIYPDDEKKPPVGQGLNRRAQV
TLDKVWPHDKSLHEPITDPQRLAAMNYEGKLRRVSAKHDTRFLEYRPETGSWVFKVDHFS
KYGLSDSDEDDSQVPPASEAKKLKGGFPALLQKGKTIAPTTTNANKDAMNGTIGAAVGGV
KMANGKLPEMENNFLGETPIRFSYDDNSYEDRDMIISPVGETPIGRSMFTPRDYSFEKPT
SQTISPIGDNARVAGTDSHKLQLMKASFFDKNDEDMAEEMNHDGFLSGQKTLVRYFPDVT
GAKRYEIPHSAPTLRSSFILNEGSFCMNQDSTLYALRKTLQPTCISARNEQPMIEKTVLP
SAVTPITSVLKYHYEVVPLEESRLKKLRFRCVADTAIQMGRMFRSSWGVGLTLLSLSTQE
QATKMQLRNAFSQVGRYVSGRHVGDITSTAIVQRLQILGGDEDDVKTFTDSIERHLRIQL
NHCVVGHEGDCPVLDVAIDSANEALQLHCSLAQDLAEKEQRPHENVDDEQPYHGNVERSF
CQYASTVWRLCVALWGKYPDQDTADNANEEHYNVMMRREAIGEWLKNVVQEMVEREIRNV
DGEVNNSHEKIILSLLSACKLEEACHEARRVGDHCLALLMAQLRSGMPVKELIKQQLALW
QETDVDENLTIERLKLFTLVAGEPLISSKHGTINVCENLDWKRAFAVHLWYLSPPTCSIT
DALDLYEASFNTTETEVYAATPEPEYKGSDYDTELSNGKRVYDLCFHLLKLYCTGNHDLG
QLLNPLSYTANPLDYRLSWLIQQTLVALGYTHLSDHVTALTHTNFATQLEAHGLWHWAIF
VVLHLRDSSRRRTAVQDLLLRHIEIDDTPEYAKREQFLKEELGISSVWIHQAKAIKSSIN
KRYGEAAWYYIQAEQWTQAHEIIIEYLAADAIINENYEYLKSLLSPLVPVECSSTISGWA
HQGQLLWEYMEITSEIQNLLKSASDYRGITYQLEALKPRLTSLCHKIDQFPCPTAKHRLC
QAEIAKRTLHLARNLLLLQRNEKTSVTKLLIRMISQLPLPEDYAQQELRPIVNMRVTEVI
SQ
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcaaactggaaatacatcattcagcggatttaacacggcaacgcaaaacagt
ccgtttggccaatccgcctttggtaaacccattactacaacaagtttcggtagtggcgca
acacctgtttttggtagtagcaatacttcatcactctttagttctaagcctacaggttct
accacaggtggcttgtttggcaataccacaacgccaccggcatttagacagccaactaat
actcaaccatcctttggaggtttcgggacaacaaatacaagtaccaatctcttcggcagc
caacagaatgcgagcacgaatcttttcggcacaagtacgggaacttctgcctttggccaa
gcaaataagcccgctggtttcagctttggcactacgactggaactaatttgttcggacaa
ccgcaacaaaatgcacagcaaactactcccttcggtcaagcgagtactaccaccagtaca
aatctctttggtacaagcacaggttttggcagtactactactactactgtaccaactggc
accgtggtaaaattcacccctgtcataacgactgattctatgtcgaaaaatggaatatca
catagcatttctgcacgtcactgttgcatcgcgtctatgaaggagtatgaatcaaagtcg
tacgaggagctgcgttttgaagattatcaggttggaaggaaaggtccgcaaacgggactc
tttggagcgccatcgcagacatcgccctttggtagtacgacagctggaactagtacagct
ggaactggatttggttcaatggctggaggatttggcactacgagccagtcaggatcgtct
ggtctatttggtaaacccatcactaattttggaacaccagcaaccacgaccaccaacagt
tttccatttaattctacaccaaccacaaatctgtttggtaccaacactcagacgaaacca
tttggtacagctgccccgacaccgctttttggcaccagcaataccaatccagctactggt
acaggttttggcatcaatgctggccagagcaccggttttgcatctgcattcggttccacg
cagcctaatcagagcattggattattcaatcagaacaagtctgcttttaatatcccatcg
acgtcgaccagcactggttttacgggtttcggtcaaccagcgacaaataataccactacg
ccgttatttggtaacaaaaccagcactaccggctttggaacaacgtccacgttcggtgca
accgcaccttccacattcgggactaacacgggcttcaattcaggctccaatactggatcc
tcgttattcaattcgtcgtttaaaccagctggacaaacgtcgggattctcttttggcgct
acatcgacatcttcgactgggcttggcacaaataccggtttaagcttgggtggcgggtcc
tcgttatttggacaacaaaaaccaggtagtttgtttggaaataccggaagtaacgcaacg
ttcaataactctggaacattcggatcttccacttttgggacaaactccaacataatgtcc
ggaacgggaatgggtttgcttaatggaggaataacatcaaatcaagctaaaactaatggc
tcggtaccggtgcaccagcaaatcttggctcttgtctccgcaccgttcggtgattcaccg
ttattaaaaaatcttttaccggcgtctggaaagactgaagaactcttaaagcctacgaat
ccagcaacgaaggtgctgaacagcccacagtacagagttaccgccagtaaatccccaaaa
ctcaaggcacgagttgtcagttctgtacaactaactaagaagtccttgtttgacggtctc
gaagaggaagaccctgtattgactgaggctttccaaccccggccaagcgcgaaacgcctg
gtactacgaccaaaatcggcgacaaattcttcgattcagtctcctgtggaaaatggagaa
tctgcaacgaggaatagtattaccgataacaataacgataaagcggatacgccgaatgca
ttgcacagtaataatattgaagtaaataacaaggagaatcacatccaagataatcaagtt
gcaaatgatcgacggtcgtccgtgtcttggttgaaatcgacaattccacgaaggaacaaa
attccggacgatgaactgctcgagggacaacggtccccattctcgggcacaaacgcacct
gaggagattaataatacagtgaccgaattgcgaccgcagaataacatatccaacactaat
cattcggatcatacgattaactctatcgaggcacagaactctactctcggtgacaaaagt
tccgtgaatcttaccatgcacaataccgattcgagtcaagagccgggtgaaaactcgttc
tccatgttacaatcgaactggaacgcgaacttggctaaagtcgtactacgacgggtgggt
tattataccattccgccgctcgataaattggacgattttgtttgcggcgagacgtgcatc
gtgccaaacttcaccgtcggccgcgaaggatacggcaacgtctactttccggactcgttc
gacatatatggattaaatctcgatgaaatcgtccactttcgacataaggaagtgattatc
tatcccgacgatgagaagaaaccaccggtgggacagggcttaaaccgaagagcgcaagtc
acgttggataaagtgtggccgcacgacaagtcgttgcacgagccgattaccgatccgcag
cggctcgctgcgatgaattacgaaggaaagctgcggcgagtgtccgcgaaacacgacacc
cgttttctcgaatatcgcccggaaaccggttcatgggtcttcaaggtcgatcatttctcc
aagtacggtctcagcgattccgatgaagacgacagccaggtaccgccagcttcggaagcg
aagaagctgaagggcgggtttcccgccctcctgcaaaaaggaaagacgatcgctccgaca
acgacgaacgcgaataaggatgcgatgaacggaactatcggtgccgcggtcggcggtgtg
aagatggcgaacggcaaacttccggagatggaaaacaattttttaggggagactccaatc
cgcttttcgtacgacgacaacagttacgaggacagagacatgatcatcagtccggtcggc
gaaacgccgatcggccgttccatgtttactcccagggactacagttttgagaaaccaact
tctcagactatcagcccgatcggcgacaatgcccgagtcgccggcaccgacagtcacaag
ctgcaacttatgaaggccagctttttcgacaagaatgatgaggatatggcagaggagatg
aaccacgatggatttctctcggggcagaaaactctggtccgctatttcccggatgtcact
ggagccaagaggtatgagattccacacagcgctccaaccttgcggtcaagtttcatcctg
aatgagggatccttctgcatgaatcaagacagcacgctttacgcgttgaggaaaacgttg
cagccgacatgcattagcgcgaggaacgagcaaccgatgatcgaaaagactgtcttacct
tctgcggtcactccgatcacgagcgtgctcaagtatcactacgaggtcgtgccgctagaa
gaatcgagattgaaaaagttgcggtttcgctgcgtcgccgacaccgcgatacaaatgggc
aggatgtttcgttcgagctggggcgtcggcttaacgttgttgtctctaagcacgcaggag
caggcgaccaagatgcaactacggaacgcgttcagtcaagtaggccgttacgtttctggt
cgtcacgtcggcgacatcacgtcgacagcgattgttcaacgcttgcagattctgggcggc
gacgaggacgacgtgaaaacgttcacggacagcatagaacgtcacctgagaatccagttg
aatcactgcgtggtaggtcacgagggagactgtcccgtcctcgacgtcgcgatcgatagc
gcgaacgaagcgctgcagttgcattgctcattggctcaggatcttgctgagaaggaacag
agaccgcacgagaacgtcgacgatgaacaaccgtatcacggtaatgttgaacgatcgttc
tgtcaatacgccagcactgtgtggagattatgcgtggccttgtgggggaagtatcccgat
caggacacggccgacaacgccaatgaggaacattacaacgttatgatgaggagggaggct
ataggagagtggctgaaaaacgtggtgcaggaaatggttgagcgggagattaggaatgtc
gacggcgaggtgaacaattcgcacgaaaagataatattgtcgctgctctctgcctgcaaa
ctggaggaagcttgtcacgaagcgcgcagagttggagaccactgtttggcgttactaatg
gcgcagctgcgtagcggcatgccggtcaaggaattgatcaagcagcaacttgcactgtgg
caggagaccgatgtcgatgagaatctcacgatagagcgtctgaaattgttcacgctggtg
gcgggcgagccgctcatctccagcaaacatgggactatcaacgtgtgcgagaatctagac
tggaagcgagccttcgccgtccacctgtggtacttgtcgccgccaacatgctcgatcacg
gacgctttggacctctatgaagcgtcgttcaacacaacggagaccgaagtgtacgcggcg
acaccggaacccgagtacaaggggagcgattatgacactgaattgagtaacggcaaacga
gtatacgatctctgcttccatctgttgaaactctactgtacgggaaatcacgacttgggg
caacttctaaatccactctcctacactgctaatcccttggattatagactaagttggttg
atacaacaaacactcgtagctctcggttatacgcatctctccgatcatgtcactgcatta
acgcacacgaattttgcaacgcaactggaagcacatgggctttggcactgggcgattttc
gtggtgttgcacttacgagactcgtccagaaggcgaaccgcagtacaggatctgctgtta
cgccacatagagatagacgatactccagagtatgcaaagcgtgagcagtttttaaaggag
gagctcggtatatcgtcggtctggatccatcaagccaaggctatcaaaagtagcattaat
aagaggtatggcgaagcagcttggtattacatccaagcagaacagtggactcaagcccac
gaaattattatagaatatctggcggctgatgctataataaacgagaattacgaatatcta
aaatctttattaagtccgctagtaccggtcgaatgtagcagcacgattagcggttgggca
caccaaggacagcttttgtgggaatacatggagataacttcggaaattcaaaatctgtta
aaatccgcttcggactatcgcggaataacttatcagttggaagcgctgaagccccgactg
acgagtctgtgtcataaaattgatcagtttccctgtccaaccgcgaaacatagattatgc
caggctgaaattgcgaagaggaccttacacttggccagaaatctgttgttactgcaaaga
aatgagaaaacgtcggtcacgaaattgcttattcgcatgatatcgcagttaccactaccg
gaagattatgcgcagcaagagctacgaccaatcgttaacatgcgtgtaaccgaagtgata
tcacaatga
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