Ooceraea biroi (clonal raider ant): 105276599
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Entry
105276599 CDS
T05778
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105276599
03036 Chromosome and associated proteins [BR:
obo03036
]
105276599
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105276599
Chromosome and associated proteins [BR:
obo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105276599
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_9
HHH_3
Tex_YqgF
Spt6_S1
HTH_10
S1_RRP5
Tex_N
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
105276599
NCBI-ProteinID:
XP_011332657
LinkDB
All DBs
Position
6:13140135..13149418
Genome browser
AA seq
1770 aa
AA seq
DB search
MAEYLDSEADVSEGEEELDQNEKRKLKKLKAMEESDDEEEDDEDQLREELKDLIDDNPIE
ESEGEDSDGSNHHKKRKKSDDEDFDDRLEDEDYDLIEENLGVKFERKRFKRLRRIQDEES
EEEQEKEADEERDAIANELFEGSGDERDIITEDERRSERSHRPDADNFLLAEEGSDEGEY
TDADDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEE
EEEEDEYMDEDIDTERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIP
ERMQLRSVPVTLVPEGSDELDLEAEWIYKQAFCKPTISIQDAHLNAEAKERARKGPQTIG
KIKKALDFMRNQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLF
EKMRNYQLDEIMKNPDAPLSEDVRVIKDEDIERLKNVQTSEELNDVYHHFMLYYSHEIPT
MQEAVRQKEKEARREARIQRRKQQIAEAEENGEDPPEEDDALEEEEVDETLKQAVRSGPY
SICRKAGLDGLAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTTIANEYCSARFQTPEEV
VKAAQLMVAIQLAREPLVRKCVREMYMERAKISVQPTKKGIKEIDENHPVYTMKYLKDKP
VRDLEGVQFLNLIIAEEDKLITITLSDSIEGNTSGNYVDEMKQLYCRDEFSKLVQDWNAL
RVGSVEIALNRMVIPHLKKELRTNLIAEAKECVMRACCRKMYNWIKVAPYSCEFPEEEDD
EWDTSKGLRVMGLAYVPDYSQAAFTCLIAADGECTDYLRLPHLMKRKNSYREDEKIMKEA
DLVALKNFIATKKPHVVVVAGESREAMMIAADIKECVTQLTEGEQFPNIQVEICDNELAK
IYSNSNKGVSEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHNLQDQLPK
EELLENLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRL
ENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAV
DALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSR
YKDLRVPYQSPSAEKLFDVLTKETPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRNE
ESGLWQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVT
NPGERVGMGQIIHCRIIKIEVDRFSVECTSKSSDLADKNHEWRPQRDPFYDTEAEQKDMK
VEEDAKKAKQRQIYVKRVIVHPSFHNISFAETVKLMQTMKQGEAIVRPSSKGADHLTVTW
KVTDDILQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAGYVSELLDFKY
YKPTVEGIKDKAEDILKEQKKENPNGIPYIVSAAKNYPGKFLLSYLPRTRCRHEYVTVTA
EGYRFRGQMFGRVSDLLRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYTTPGAVSGMNQEA
IQRVAQNLPHHMLHSLSQVANQTPHHYPPHTPGATGAAGYGGVHTYQNTPYTPSGQTPFM
TPYQTPHHTPHHGQPTPRYGQQTPSHQGPFVHPPPPSMTPGHHRSAQSHRPTPPLSTPSG
DPTDWKKAAEAWARLKSGPRISGSTPRYDESRKTPRSYDESAGRTTPSGRSRPSSTRTPS
YKSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtatctggattccgaggcggacgtgagcgagggtgaggaggaattggatcaa
aatgagaagaggaagttgaaaaagctaaaggcgatggaggagagcgatgacgaggaagaa
gatgatgaggatcagttacgtgaagagctaaaagatttgatagatgataatcctattgag
gaaagcgagggagaagatagcgatggttctaatcatcacaagaaacgtaaaaagagtgat
gacgaagacttcgatgatcgcttagaagatgaggactatgatttgattgaggaaaattta
ggtgttaaatttgagagaaaacgtttcaaacgtcttcgaaggattcaagatgaagaatcg
gaggaagagcaggagaaggaagctgatgaggagagagatgctattgccaacgaattgttt
gaaggctccggagatgaaagggatattatcacggaggacgagaggcgaagtgaacgaagt
cacagaccagatgcagataacttccttctagcagaggaaggtagtgacgaaggagagtac
actgacgcggatgatttcattgtcgatgacgatggcagacctattgcagagaaaaggaag
aaaaagaagcctatattttctgacgcagcgttgcaagaagcacaggatatttttggcgtt
gattttgattatgacgaatttggtaaatatggtgaggaggattacgaagaggaagaggag
gaggaggaggaagacgaatacatggatgaggatatcgatactgagagaccgcggcggccg
aagaaacaattgaagaaaaagaccacgagaaagagcatcttcgagatttacgagcccagc
gaattgaagcgcggccattttaccgatatggataatgagatacgtaacacagacataccg
gaaaggatgcaattgcgatctgtaccggtcacgctggttccggaaggttccgacgaattg
gacctcgaagccgaatggatttataagcaagccttttgcaaacccacgatctccattcaa
gatgctcacctgaacgccgaagctaaggaacgggcgcgaaagggaccgcagaccattggc
aaaatcaagaaagccttggattttatgcgcaatcaacacttcgaagttccctttatttct
ttctacaggaaggagtatgtcttgccggagctgaacatcaacgacctgtggaaggtgtac
aagttcgacgcaaagtggtgtcagttgcgtcagcggaaggaaaatctgctgaaattattc
gagaaaatgcgaaactatcaacttgacgagatcatgaagaatccggacgcgccgctctcg
gaggatgtccgagtgatcaaggatgaggacatcgagcgattgaagaacgtgcagacgagc
gaggagcttaatgacgtgtatcaccactttatgctgtactacagccacgagatcccgact
atgcaggaagcggtgcgacagaaagaaaaggaggcgcgtcgtgaggcgagaattcagcgg
cgcaagcaacagatcgcggaggcagaggagaacggcgaggatccaccggaagaggacgac
gcgctggaggaggaagaagtcgatgaaacgttgaagcaggcggtgaggagtggcccgtac
tcgatttgccgtaaggccggtctggacggcttggcaaagaagtttggtctaacgcccgag
cattacgccgagaatctgcgtgataattatcagcgtcacgaggtggatcaggaaccgacg
gagccgacgacgatcgcgaatgagtactgcagtgcgcgatttcagactcccgaagaagtg
gtgaaggccgctcagctgatggtggcgattcaacttgcacgcgagccgctcgtgcgtaaa
tgtgtgcgcgaaatgtacatggagcgcgccaagatctccgtgcagccgacgaagaagggc
atcaaagagatcgatgagaatcaccccgtctatacgatgaagtatttgaaggacaaaccg
gtgcgcgacctcgagggcgtgcaatttctgaatctgattattgctgaggaagataaactc
atcacgattactctcagtgacagtatcgagggtaacaccagcggtaactatgttgacgag
atgaagcagctttattgtcgggatgagttcagcaagcttgtgcaggattggaacgccttg
cgcgtcggtagcgtcgaaattgcactcaatcgcatggtaataccgcatttgaagaaggaa
ttgcgcacgaatctgattgccgaagcgaaggagtgcgtgatgcgcgcgtgctgccgcaag
atgtacaactggatcaaagtcgcgccgtacagttgcgagtttcccgaggaggaggacgac
gagtgggatactagcaagggtctgcgcgtcatgggcctagcctacgtgcctgattattct
caggcggcttttacctgcttgatcgccgccgacggcgagtgcaccgactacctgcgtctg
ccgcacttgatgaagcgcaagaacagctatcgcgaggatgaaaagattatgaaagaggct
gatttagtagcgctgaaaaacttcatagctacgaaaaagcctcatgtcgtcgtggtggca
ggcgagtcccgggaagcgatgatgattgccgctgacattaaagaatgcgttacccagcta
acggagggagagcagttccccaatatccaagtggagatttgcgacaacgagctcgcgaag
atctattctaacagtaacaaaggtgtctcggagttccgggactatccagagttgctgcgc
caggccatttcgttggcgaggaggatgcaggatccattggtggaattttctcagttgtgc
acggcggacgaagagatcctctgcctcaagtatcataatctacaggatcaattgccaaag
gaagaactactggagaatttatatttggaatttgtcaatcgcgtgaacgaagttggcgtg
gacgtgaacaaggcggtgcaacaggcatactgtggcaatctcgtacagttcgtctgcggt
ttgggcccgcgaaagggtcaagcattgattaaaatgctgaagcagacgaatcaacgactg
gagaacagaacacaattggttaccgcttgccatatgggaccgaaagtgtttatcaattgt
gccggtttcatcaagattgataccaacagcttgggcgacagcaccgaggcgtacgtagaa
gtactcgacggctcgcgcgtgcatcccgagacctacgaatgggctagaaaaatggcggtt
gacgcgttggaatacgacgacgaggatgcgaatcctgccggcgccttggaggagattctt
gaatcaccggaacgtttgaaagatctcgatctcgacgctttcgcggaggaacttgaacga
caaggcttcggcaacaagtgcgtcactctgtacgacataagagccgagttgaatagtcgg
tacaaagatcttagggtgccgtaccagtctccgagtgcagagaagttgttcgacgtcttg
acgaaggagacacccgaaactttctatgttggcaagctggtattggctactgtagttggc
ataagtcaccggaaaccgcagggtgatcagctcgaccaggcgaatccagtgcgaaatgag
gaaagtggcttatggcagtgtccgttttgtctgaagaatgactttcccgaattgtcggaa
gtgtggaatcactttgatgctggtgcttgtccgggcaaagccacgggtgtgagattgcgt
ctggacaatggaatatcgggctacatccatatcaagaacttgtctgatcgacacgtcaca
aatcctggcgagagagttggtatgggacaaatcatccattgccgtattatcaagatcgag
gtggatcgattcagcgtcgagtgcaccagcaagagcagtgatctcgctgacaagaatcac
gaatggagaccgcaacgagatccattttatgacaccgaagccgagcagaaagacatgaaa
gtggaggaggatgcgaagaaagcaaagcaacggcagatctacgtgaagcgtgtgattgtc
catccatccttccacaatatcagctttgcagagactgtgaagttgatgcagacgatgaag
cagggggaagcaatagtgaggcccagcagcaaaggtgcagatcacttgacagtcacgtgg
aaggtcactgatgacatattacaacacattgacgttcgcgaggagggcaaggaaaatgcc
ttctcactgggacaaagcttgtggattggcaacgaggagtttgaggacttggacgagatc
atcgcgcgacacgtgaatcccatggccggttacgtctccgaattattggacttcaaatat
tacaagcccaccgtagaaggaataaaggataaagcagaagacattctgaaggaacagaag
aaggagaaccctaatggaattccctatatagtatcggcggccaagaactatcctggaaag
ttcttactctcgtacttgccgcgcactcgctgccgccacgagtacgtcacagtgacagcc
gaaggctacagattccggggacagatgtttggtagagtaagcgacttgttacgctggttc
aaggaacatttcagagatccagtccccggacaatccactcctagcactccgcgcggcgcg
atgacttctagaacaccgtacactacaccgggagcagtgagcggaatgaatcaagaagca
atacagcgggtggctcagaatctaccgcatcacatgctgcactcattgtcgcaagttgca
aatcagacgcctcatcactatccaccgcacactccgggagcgactggtgccgccggttac
ggcggagtacatacgtatcaaaacacgccatacacgccgtctggccagacaccgttcatg
actccgtatcagacgccacatcatacgccgcaccacggccaacctactcccagatacggt
caacagactcccagccatcaagggcctttcgtgcacccaccaccgccctcgatgactccc
ggtcaccacagatccgctcaatcacacagacctacgccgcccttatctactccttccggc
gatccgacggattggaagaaggcggctgaggcatgggcacgactaaaaagtggtcctcga
atctctgggtccacgcctaggtatgacgaatccaggaagactccgcgtagctatgacgaa
tcggccggcagaacaacgccttccggaagaagcagaccctcttccacgcgaactccgtcg
tacaagtccccgcggggtactccacacacgaattctagtccacggagtatgtctctcagc
ggggatggtacccccctatatgacgagagctaa
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integrated database retrieval system
