KEGG   Ooceraea biroi (clonal raider ant): 105276607
Entry
105276607         CDS       T05778                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
obo  Ooceraea biroi (clonal raider ant)
Pathway
obo03030  DNA replication
obo03410  Base excision repair
obo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:obo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105276607
   03410 Base excision repair
    105276607
   03420 Nucleotide excision repair
    105276607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obo03032]
    105276607
   03400 DNA repair and recombination proteins [BR:obo03400]
    105276607
Enzymes [BR:obo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     105276607
DNA replication proteins [BR:obo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    105276607
DNA repair and recombination proteins [BR:obo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      105276607
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N zf-MIZ NAPRTase_C
Other DBs
NCBI-GeneID: 105276607
NCBI-ProteinID: XP_011332673
LinkDB
Position
12:4755978..4765007
AA seq 2299 aa
METLQNTGAARPWTNNRRNPNQEATASGDNALGRLLEIKEDIRIDGVYGFRRVTDSKERV
GFLLNMHATEIVEDDKRMLSGVDYYFIEEDATRFKISLPYSPYFYILCRKNTFEEVSTFL
SKKYTGVLAKIETLYKEDLDLPNHLIGLKQKYLKLSFANTVDLTKVKRDIMRAVKVNKER
EKSNTYYTDMLATTLQPSEQDSSKQTLDHMDNVLDIREHDVPHHVRVSIDAGIFCGTWYS
VKSRGSEPPLITQKKDMIEPPEPIVLAYDIETTKLPLKFPDSSFDQIMMISYMIDGQGYL
ITNRELISADIRDFEYTPKPEFEGPFVIFNEPNEKAMIARFFDHINEIRPHIFVTYNGDF
FDWPFVEARAAVHNMDMKERIGFAKNRDGVYVSRAAMHMDCLCWVRRDSYLPVGSQNLKA
VAKAKLRYDPVELDPEEMCRLASEEPEVLANYSVSDAVATFYLYQKYIHPFIFALCTIIP
MEPDEVRNRRTAIADVHAFPVGRCKQHVSLFQVLRKGSGTLCESLLMVQAFRANIIFPNK
QESELNKLTKDGHLLDQETYVGGHVEALESGVFRADIPCRFKIVPSAVDELIRGAENALK
HTIQEEEKVPIEAVTNFDEIVNEVKGKLRELRDQPLRLENPVIYHLDVGAMYPNIILTNR
LQPSAIVNEMDCAVCDYNKPDALCQRKMQWMWRGEYLAASLGEYQRIKQQLETERFPPQF
PGGSKRAFHELTTKEQAQFQKTRLTEYCKKAYKKVKITRMEEKTQTVCQKENSFYVDTVR
AFRDRRYEYKALTKVAKRQVAAAVGKGDAADIKSAKNREVLYDSLQLAHKCILNSFYGYV
MRKGARWHSMEMGGIVCYTGAHIIMKAREIIEQIGRPLELDTDGIWCILPASFPDSLVVH
TTHEKKTKFTISYPNAVLNFMVKDQFTNEVYHELVDSDNLTYEIRHENSIFFEVDGPYLA
MVLPAAKEEGKKLKKRYAVFNFDGSLAELKGFEVKRRGELQLIKIFQASVFESFLKGNTL
EECYASVAKDADYWLDLLYSKCANMPDSELFELISENKSMSRKLEEYGAQKSTSISTAKR
LAEFLGDEMVKDAGLACRYIIANKPQSAPVTERAIPLAIFQSEPAVRRHYLKKWLKDPML
YSDDIRDILDWNYYIERLGSAIQKIITIPAAMQGLANPVPRVQHPPWLHKKVTEKSASHR
QKKITDMFTVTVKENTQNSGTDESRDIEDLAGPSTSFKNPVSIVNKRKRGHSEEEAIRGK
NWREVLGSPPPKGTTRQETLKWLEFHKKKWAFQAKQRQQYRQKRSKTDESDEITWGVVRN
TNTSTMTGFLRRAQRKLLETPWQIVQLCETGEPGLFRLWILVDKQLHQVRLVVPRVFYVN
TRKARPDPGPNELWKKSFKSLPRSRPVYNLYRYSLPESLFQEHSRELLEDLSKPEIEGIY
ETQMSLEFRAILQLGCVCIVDRRAARKMADGADTFTLDQLEYKSIAFQPYLKQTESLNYI
FLYHHWSSNHQRALWGLFLGASRRAHVFVLDSVASNQLPNMNTLYAQERKAALEKNGEDK
MTQVPKTVQFVTQVETNFQQVCRTLQAALTAYKNEGHGATIVINQTALDRAALTAEMPLL
SEFPLVSTHVRDAENLYSTLEWQKMGAKTMVRHYMNSQRVIDFMSEQCRFFHAPIGNIPA
DPTLFGADLFYARHLHRNNFVLWCSLTEKPDLGGSENDDNRLLTDFEESSSCAANNPGAY
SSVCVQLDVESLAVNALLQYHHIHDVDGTSTFVAFHNQQRPSLQDMATGDAATIIPSYDE
ITLCNPAFKTLRSMVNAWLLEVSVYKNIFADYQLVHFYRWLRSPTALLYDPALRRTLHTY
MKKLYIQLIAEFKTLGCIIIFANFSKIIVCTKKRSVGDALGYMEFVVQTIRNKELFHSIE
ITYDQCWEYLIWLDLHNHAGIKGQLSKDTNDDEEDDENTENDDDDAPKVVMNWSLMECLP
KEAGCQANFSTVIAGYINTIHQCMIDNEANHTVRPRRRQSQSLTAPLGLGALENTAEFAK
KMISGEMSQKLFKYLFMHLLYSLFQHKIEGKTNNFSEIVLKSFRIAQKIHKSLPEKTLTL
KEYPNVNMGGKESVRINPALELIKAVCKVLSLDKEVENEIFDLKADLLRLIGVGSHGDDV
EWKEPCISLVLPEVICKGCNHVRDIDLCKDQYYTVENNRHTWKCPTCNVAYDNAEIEFSL
IDKLSRKSMGYVLQDLQCRKCKNIKRENMNTLCSCSGEYDNLLPRDEITMLVNICKSIAS
KCKMNVLAEIVENTKLFTG
NT seq 6900 nt   +upstreamnt  +downstreamnt
atggaaactttgcaaaacacgggagctgcccgtccctggacgaacaacagaagaaatcca
aatcaagaagccactgcttcaggggacaatgcactgggaagattgctcgagatcaaggag
gatatcaggattgacggtgtgtatggatttcgtagagtcactgactccaaggagagagta
ggattcttgctcaacatgcacgcgactgaaatagtggaggatgataagcgcatgctgagt
ggcgtggattactatttcattgaggaggatgctacaaggttcaaaatatcattgccatat
tcaccgtacttttatattttatgtcgcaagaacacgtttgaggaagtgtcgacattttta
tctaaaaagtatacaggcgtattggcaaaaattgagacgctttataaagaagatcttgat
ttgcctaatcatttgattggtttaaaacaaaagtatctgaagctctcttttgcgaacact
gtcgatttgacaaaagttaagcgcgacattatgcgtgctgttaaagtcaacaaagagcga
gagaaaagtaatacctattatacagatatgctggcaaccacgttgcagccaagtgaacag
gatagcagtaagcaaaccttagatcacatggataatgttcttgatattcgggaacacgat
gtgcctcatcatgttcgagtgtccatagacgctggtattttctgtggcacttggtattcc
gtaaaaagcagaggaagcgagccgcctctgattacgcaaaaaaaggacatgattgagccg
cctgaacctattgtactagcgtatgatattgaaaccacgaagttgccgttaaaattccct
gattccagtttcgatcaaattatgatgatatcatacatgatagacggccagggatacttg
ataacgaatagagaattgatctcggcagacatacgcgatttcgaatacacgccgaagcca
gaattcgaaggtcccttcgtaatatttaacgagcccaatgaaaaggcaatgatagcaagg
ttttttgatcacatcaatgagataaggccgcacatattcgtgacgtacaacggtgatttc
tttgattggccgttcgtcgaggctcgagcggctgtgcataatatggacatgaaggagaga
atcggtttcgcgaagaatcgcgatggcgtttacgtcagcagagctgccatgcacatggac
tgcttgtgctgggtgagacgagactcgtatctcccagtgggttctcaaaatctaaaagcc
gtcgccaaagccaagctgaggtatgacccagtggaactcgacccggaggagatgtgcaga
ttggcatcggaggaaccggaagtacttgccaactactccgtttccgacgccgtggcaacg
ttttatctctaccagaagtacattcatcctttcatatttgcattatgcaccattatcccg
atggagcctgacgaggtaagaaatcggcgcaccgcaattgccgatgtgcacgcgtttcca
gtaggaagatgcaaacaacacgttagcttattccaggtgctcagaaagggatccggtacg
ctgtgcgagtcgcttctcatggtgcaggctttcagagctaacatcatatttccgaacaaa
caggaaagcgaactaaacaaattgacaaaagacggccatctgttggatcaggagacctac
gtaggtggacacgtggaagcgttggagtccggcgtcttcagggccgacattccttgccgc
ttcaagatcgtgccgagcgccgtggacgagttgatcagaggcgcagagaatgctctgaaa
cacacgattcaagaggaggagaaagtgccgattgaagcggtcacgaatttcgacgagata
gtaaacgaagttaaaggaaaactgagagagcttcgcgatcagccgctgagactggagaac
cctgtgatctaccacttggacgtgggcgctatgtatccgaatattattttgactaacaga
ctgcagccctctgcgatagtgaacgagatggattgcgcggtgtgcgattacaacaagcct
gatgctctttgccaaagaaagatgcagtggatgtggagaggcgaatatctggccgcgagc
ttgggtgaatatcaaagaataaagcaacaattggagactgaaaggttcccgccacaattc
cctggtggctctaagagggctttccacgagttgaccactaaggaacaagctcagtttcag
aagaccaggctgaccgagtactgcaaaaaggcttataagaaagtcaagattaccagaatg
gaggagaaaacccaaacggtctgccagaaggagaattccttttacgtcgacactgtgaga
gcgttcagggatagaagatacgagtacaaagcgttgacgaaggttgctaagcggcaagtg
gccgcggcggtcggcaaaggcgacgcggccgacataaagtctgccaagaatcgagaggtg
ctctacgattctcttcagctcgcgcataaatgcatcctcaattctttctacggttacgtc
atgagaaaaggggcacggtggcacagcatggaaatgggtggcatcgtatgttacaccgga
gcccacatcatcatgaaagctagagaaattatagaacagatcggtcgcccgctggaactg
gacaccgatggcatatggtgcatactgcccgcgtcttttccagactctctcgtggttcac
accacccacgagaagaagacgaagttcacgatctcatacccgaatgcggtgctcaacttc
atggtgaaggatcaatttactaacgaagtgtatcacgagctcgtggacagcgataatctc
acgtacgagatcagacatgagaattctatattcttcgaagtagacggtccctacttagcg
atggtgttgcccgccgctaaggaggaagggaagaaattgaagaaacgctacgcggttttc
aacttcgacggttccctggccgagctgaaaggattcgaggtaaaaaggaggggcgagctg
caactgataaagatcttccaggcttccgttttcgagtccttcctgaagggcaacacactg
gaggaatgttacgcctcggtcgcgaaggacgcggattattggctggatttgctttacagc
aagtgtgcgaacatgcctgattccgagttgttcgagctgatatccgagaacaaatctatg
tcgcgcaaactggaggaatacggcgctcaaaagtccacgtcgatctccactgccaagaga
ctagcggaattcttaggcgacgagatggtcaaagacgcaggcttagcttgcagatacatc
atagcgaataaaccgcaaagcgcgccggttaccgagcgcgcgataccgctggctatcttt
cagtcggaaccggctgttcgaaggcattacctgaagaagtggttgaaggatccgatgctg
tacagcgacgatataagggacattttggactggaattactacatcgagcggctcggcagt
gccatacagaagataatcacgatcccagcagcgatgcaaggcctagccaatccagtccca
agagtgcaacatccaccctggttgcacaagaaagtaacggaaaagagtgcgtcgcatcgc
cagaagaagatcacggacatgttcaccgtgacagttaaagagaatactcaaaacagcggt
accgatgaatctcgcgacatcgaagatctcgcggggccgtcgaccagcttcaagaaccca
gtttcgatcgttaacaagagaaaaagaggtcactcggaggaggaggcaatcagagggaaa
aattggagagaggttctgggttcgccgccccccaagggaacaaccaggcaggagacgctc
aagtggttggagtttcacaagaagaaatgggccttccaggctaaacagagacagcagtat
cgacagaaaagaagtaagacggacgagagcgatgaaattacctggggagttgtacgcaac
acgaatacgtccactatgaccgggttcttgaggcgcgctcagagaaaactgctggagact
ccttggcaaatcgttcagctgtgcgaaacaggcgagcccggtttgttccgactgtggata
ctggtcgacaagcagttgcaccaagtgcgcctcgtggtaccgcgcgtattttacgtaaac
acgcgcaaagcacgacccgacccgggaccgaacgagctgtggaagaagagcttcaagtct
ctgccgcgctctcggccggtgtacaatctctaccggtattccctgccggaatctctgttc
caagagcacagccgcgagctcctggaggatctgagcaagcctgagatcgaggggatctat
gagacgcaaatgtcattggaatttcgagctatactgcaactgggatgcgtgtgcatcgtc
gaccgacgagccgcgcgcaagatggcagacggagcggataccttcaccctggatcagttg
gagtacaagagcattgccttccagccttacctcaagcagaccgaatcgctcaactacata
ttcttgtatcatcattggagttcgaatcaccaaagggcactgtggggcctattcttgggt
gctagcagaagagctcacgtattcgtcctggattcagtcgcctccaatcagttgccgaac
atgaacacgctgtacgcgcaggagcgcaaggcagcattagagaaaaacggtgaggacaag
atgacccaggtgcctaaaaccgtgcagttcgtcacgcaagtcgagacaaactttcagcaa
gtgtgccgcacgttgcaagcagccctgacggcgtacaagaacgaaggacatggcgctact
atcgtcatcaatcaaaccgctcttgacagggcggcgttgactgccgaaatgccattgctc
agcgagtttcctctcgtcagcacgcacgtgcgggacgctgaaaatctctacagcacactg
gagtggcagaagatgggcgcgaaaacgatggtcaggcattacatgaacagccaacgggtc
atcgatttcatgtctgaacaatgccgattctttcacgcgcccattggcaacataccggcg
gatccgactctcttcggcgcggatctattctacgccaggcacctgcacaggaacaacttc
gttctgtggtgctcgctcacggagaagcccgacctgggcggcagcgagaacgacgataat
aggctactgacggatttcgaggaaagctcgagctgcgctgcgaacaatccgggcgcgtac
tcgagcgtctgcgttcagctggacgtagaaagtctggcggtcaacgcgctgctgcagtat
catcacattcacgatgttgacgggactagcacgttcgtggctttccacaatcagcaacgt
ccatctcttcaggatatggcgacaggcgatgcagcaacaattattccaagctacgatgag
attactctgtgcaatccagcgtttaaaacgttacgaagcatggtaaacgcatggttgctg
gaagtatccgtttataagaatatatttgcggattatcaattggttcatttttaccggtgg
ctgcgatctccaaccgctctactttatgatcctgctctacgtcgtactctacacacttac
atgaaaaaattatacatacaattaatagcagaattcaagacgttaggttgcatcataatt
ttcgcaaacttcagcaagattatcgtgtgcacgaagaaaagatctgtgggtgatgctttg
ggctacatggaatttgtagtccagaccatacggaacaaggaattgttccacagcattgaa
atcacgtacgaccaatgttgggaatatctaatatggctcgacctgcacaatcatgctggt
attaaagggcaactatcgaaggatacgaacgatgatgaagaagatgatgagaatactgaa
aacgatgatgatgatgcgcctaaagtagtgatgaactggagcttaatggagtgtctgccc
aaggaagcaggatgtcaggcaaacttcagcactgtgatagcgggctacataaacacaata
caccaatgcatgatcgacaatgaagccaatcatactgtaagaccgaggaggaggcaaagt
caatcccttacagcaccgcttggtttaggtgcactggaaaatacagcagagtttgccaag
aaaatgatatcaggagaaatgtctcagaaattattcaagtatttattcatgcacctattg
tatagtttatttcaacataaaattgaagggaagaccaataatttcagtgaaattgttcta
aaatcttttaggatagcgcagaagatacacaagagtttaccagagaagacattgactctc
aaagaatatcctaatgtaaacatgggtggaaaagagagtgtaaggattaatcctgccctc
gaattgatcaaagcagtatgcaaggttttatctttggacaaggaagtggaaaacgaaatt
ttcgatttgaaagcagatctgctacgattgatcggagtcggcagtcacggcgacgatgtt
gaatggaaggaaccgtgtatctccctcgttctaccggaagtcatatgcaaagggtgtaat
cacgtgagggacatcgatctctgtaaggatcagtactacacagtcgaaaataacaggcac
acatggaaatgtcccacttgcaacgttgcttacgacaacgcggaaatagaattctcgttg
atcgacaaactgagccgcaaaagtatgggctacgtactgcaggatctgcagtgtcgaaag
tgtaagaacatcaagcgagagaatatgaatacgttgtgctcctgctcgggcgagtacgac
aacttgcttccgcgagacgagatcacgatgcttgtaaatatttgcaaatccatagctagc
aagtgtaagatgaacgtattagcagagatagtggaaaatacaaagctcttcactggttga

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