Ooceraea biroi (clonal raider ant): 105276695
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Entry
105276695 CDS
T05778
Symbol
skd
Name
(RefSeq) mediator complex subunit skuld isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105276695 (skd)
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
105276695 (skd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
105276695
NCBI-ProteinID:
XP_011332819
LinkDB
All DBs
Position
6:complement(14151871..14180983)
Genome browser
AA seq
2030 aa
AA seq
DB search
MTHPSHQTNGASLEDCHTNFFALTSLCGIKWRKLVWGEVAGGFGGTPLEDPVLSSFSRCL
AGDILCVWRRVAATPTTSGSAAAASAAASAPGAGIFDLGIAPSPAPPPLSLTAAKELWIF
WYGEEPDLSGLVSPELIACESEQGSWESGLSYECRSLLFKALHNLIERCLLSRDFVRLGK
WFVQPYNGYEKHRCSSSHLSFSFAFFVHGESTVCASVDVRQHPAVRHLTKTCLQRTQTSQ
SGVKVILAPYGLAGTLTGQVSRMDSQLLEEWKHFYPINTGSNPETGLPPLVEVLVGGVRM
RYPSCYVLVTDMDDTPPETPLSPPSSPVTCERPLLTQQEISAATELPERVWAECTLSSPV
SASKTESSTEPGTWTFVEPTQKSSCTCSCSKYTTLGGWKSLASSQVQRERVDKGGRRVVP
FHRRSTTQWDTCPSVPANAPRSVLSRTEAPSTPPGGPPSYSRGPPTGGDCLPIPSVGSPG
SPAPSPLLTPHSEPASVPPAEPTMPTLSPQPPSSHTNTAPPLTPSQGPKSISSACNNQVH
SPSVPGPVLKRPILTSREYEGALLEDEQSLSWLYDYSTQEAWLNHPVKRFKVVNTIGPPT
NRSNTLYPPIINSQTHQSQAPKLEIKQEPVAVGECIGRRTDPYEFDATGEENGTNVDGLR
RQRDDPSKPGSLFTSEGLQPSYKDLDQIFDNSDPDTSSDETNLNQLQIQTPPGSNKSGGL
HEETRIEGASKNNRGVTVLRPEELSKMFPTPPSLEHNPVASPCQLSDPLMDQTELVMPVR
PLRHLPDIYPNMGSPQEEPIDDWSYVFKPAAICKMVGSSKYAPLTNLPSQSLPSITLPSH
CVYRPSWQCNSASTNQADKPVQPTRPGSVQQQQQQQQQQQQQQQQQQQQQQQQQQPACPP
SPAPPYRTATLTGRPPPPPYDQPSPATSTTSSYLNKNLNSIEADTPGPARAPESNSLVVN
ILLGDTALNIFRDHNFDSCSLCVCNAGPKVVGNIKGADAGVYLTNSWAGSALFQDDDPIR
CSCGFSAVVNRRLAHRAGLFYEDEMEITGVAEDPAEKKKGSLAAVACPGTKAVPDGLDAI
PPNVLELLREQCLIVQSAASSLYRAARICATTKSYPTLTPTVNTLEFTDGNEVCVAALDQ
GKLDGAHERGARVNGVHRWVFLRARGPQCSGDIVRMMRSLQPLLQDAVQKKCTTRMWEAP
YTVAGPLTWRQFHRLAGRGTDDRCEPQPIPALVVGYDRDWLSLSPYAVCFWEKLSLEPFA
GPRDVAYVVVAPDSDCIVNRVKSFFRELSCTYEICRLGRHAPISKQLRDGILRVGKSTAQ
KPAVKQSTDDWFKLLGENHIGELLRLYAQVCNHRLAPYLTQVIQDRSLLDSNESQPPNKQ
QQQSTIPVSDTMPATPDVLTTKPESVEAENPRSETPSSSTTTSQTTTNTSGNTTPTSQTT
STTTPITTTTGPDEEEIEPPAIVVYFVEPFSLGGTEDPDRRRLAILGLLRIYSSAINNMP
ENMRSNIHVQIISLESIMELGRARERRKIQDEMRALALNVFLQGRRLLNHNSTVKSLTGF
GTAAAADLFLKSKDSFSNTLATIHQERNKAPYQLYAPAFVLAPLRAKSEAPESFGMARPE
ECAVLYLSYCLSEDQSWLLAAATDDRGEIFETATINIDIPNRKRRKRASARRIGLQKLMD
FILGVMSQGVQPWRLVVGRVGRIGHGELKGWSWLLSRKALLKASKHLKEICGQCSLLYPS
AAPCVLSACLVSLEPDSTLRLMADQFTPDERFSQASVNCQLSTPQDVTCTHILVFPTSAT
TQSSQTAFQEQHNVPELGDDELFSALNDDMPEGMEAMGDFNDIFNVWPEPGAGGGQSPSG
SPHRPEGSPHGGDGGGSGLGNHDGPGSPFPCSNTPRTAIAEQAEEVGTLLQQPLALGYLV
STAPTGRMPPWFWAACPHLENACPVFLKNALHLHSPAIQQNSDDLLQQQSAPTAHPLDSQ
YTTDVLRYVLEGYNALSWLALDANTKDRLSCLPVHVQALMHLYHATAALV
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccgtcgcatcagaccaacggcgccagcctggaggactgccacacgaatttc
tttgcactgacatccctttgcggtatcaaatggaggaagctcgtatggggcgaagtggcc
ggtggattcggtggcactcctctagaagatccagtactgtcgagtttctcgcgatgttta
gctggtgacattctgtgcgtgtggcgacgcgtggccgccacaccgaccacctccggttct
gcagcagctgccagtgccgcagcatcggcgcccggagctggaattttcgatctgggcatc
gcgccctcgcccgcgcccccgccgctttcccttacggccgcgaaggaactttggatcttc
tggtacggcgaagaacctgatctctctggcttggtatcaccggagctcatcgcctgcgaa
agtgaacaaggttcttgggaaagcggattgtcgtacgaatgccggtcacttcttttcaag
gctctgcataacttgatcgaacggtgtttgctatcccgtgacttcgttcgtttaggaaag
tggttcgtgcaaccttataatggctacgagaaacaccgttgtagtagcagccatttgtca
ttctcctttgcattctttgttcatggagaaagtactgtttgcgcgagtgtggatgttagg
cagcatcctgcagtgcgacatcttacaaagacgtgtctacaacgtacccagacctcccaa
tctggtgttaaggtgatcttagctccttacggactggcgggtacgttaacgggtcaggtg
agccgtatggacagtcaacttctcgaagaatggaaacacttttatccgattaataccggt
agtaatccagagactgggcttccgcccctcgtggaggtcctcgtcggtggcgtgcgcatg
cgttatccttcttgttacgtcttggttacggatatggatgatacgccacccgaaacacct
ctctcgccgccaagtagccccgtcacttgcgaacgacccctcttgacgcaacaggaaata
agcgcagctaccgaattaccggaacgcgtttgggcagaatgtactttgagttcaccagtg
tctgcttccaagacagaatcttccacggaacctggaacctggacgtttgtggaaccgacg
cagaagtcttcctgtacctgttcatgttcaaagtatacgaccctcgggggttggaagagc
ctggcctcctctcaggttcagagggaaagggtagataaaggtggacggagggtcgtaccg
tttcaccgacgctctaccactcagtgggacacttgtccctctgtccctgctaatgccccc
aggtcggtactaagtagaacagaagcacccagtacaccaccgggtggtcctccttcgtac
tcgcgcggaccaccgacaggaggagattgtctaccaataccgtcggtcggctcaccaggt
tctccagcaccatcgcccctcttaactcctcactccgaaccagcgtcggtcccgcccgcg
gagcctacgatgccaactttgagcccgcaacctccatccagtcatacaaacactgcccca
cccttaaccccgtcacaagggcccaagtctatttcttccgcgtgcaacaaccaggtgcac
agtccatcggttcccggaccagtactgaaacgaccgattctgacatccagggaatatgaa
ggtgctctcttggaggatgagcaatccctgtcctggctctatgattattcaactcaggag
gcatggctgaatcatcctgtgaaacgttttaaagtcgtgaacaccattggcccaccaact
aaccgaagcaacactctgtacccaccaataataaactctcaaacgcaccaatctcaagct
ccaaaactggagatcaagcaagaacctgttgcggttggcgaatgtatcggaagaaggacg
gatccatatgaatttgacgcgacaggcgaggaaaacggtacaaatgtcgacggactcagg
cggcagagagatgatccatctaaaccgggatctctcttcactagcgagggtcttcagcca
tcctacaaagatctagatcaaatattcgacaattctgatcccgatacttccagcgatgaa
acgaatttgaatcagttgcaaatacaaacaccgccaggctccaataaatctggcggatta
cacgaggaaacgagaatagaaggcgcgagcaaaaacaatcgtggagtcacggttttgcga
ccggaggaactttccaagatgtttcctactccaccatccctcgagcataatccggtcgcc
tcgccttgccaattgagcgaccctctcatggaccagactgagcttgtaatgccggtgcgg
ccactcagacatctaccagacatctatcccaacatgggatctccacaagaggaaccgatc
gacgattggtcatacgtgttcaagccggcagctatctgcaagatggtcggttcttccaaa
tacgcacctctcacaaatctgcctagccaatctctgccatccatcacactgccatcgcac
tgcgtatacagaccttcctggcagtgcaattctgcttccactaatcaggcagataagcct
gttcaaccgaccagacccgggtccgtgcaacaacaacagcagcagcagcagcagcagcaa
caacagcagcagcaacaacaacagcagcagcagcaacaacaacagccagcttgtccgcca
agtccagcaccaccgtatcgcaccgccacgctcaccggtaggccgccaccacctccgtat
gaccaaccgagcccagctacctccaccacctcttcgtatcttaacaagaatcttaatagc
attgaggctgacactccgggacccgctcgtgcacccgagtcaaattccctcgtagtaaat
atcctcctaggcgatacggcgctcaacattttccgcgatcacaatttcgacagttgcagt
ttgtgcgtgtgcaatgccgggccgaaagtggtcggcaacatcaagggcgccgatgcgggt
gtttatttaaccaactcgtgggcaggttcggcgctcttccaggacgacgatccaatcagg
tgcagttgcgggttcagtgccgtagtgaatcgccggctcgcgcatcgggcaggcttgttc
tacgaagatgagatggagatcacgggcgtcgccgaagatccagccgagaagaagaagggc
tcgctcgccgcggttgcgtgtcccggcacgaaagcggtcccggacggtcttgatgcgata
ccaccgaacgtcctcgagttacttcgcgagcaatgtctcatcgtgcagagcgcggctagt
agtctgtaccgagcagccaggatatgcgccactacaaagagctatccgacgttgacgcct
acagttaacaccttagagttcaccgatggcaacgaagtgtgtgttgcggcactcgatcaa
ggcaagctcgatggggcacacgagagaggtgcgcgcgttaacggcgtgcatcgatgggta
ttccttagggctcggggaccccagtgtagcggtgatatcgtgcgaatgatgaggtcgcta
caaccactgctccaggacgcggtgcagaagaagtgtacgacgcgcatgtgggaggcacca
tacactgtcgctggcccgctcacgtggcggcaattccatcgtctggccggacgcggcacc
gacgatcgctgtgagccgcaaccgattcctgctctagtcgtcggatacgaccgtgattgg
ctgtcgctgtcgccgtacgcggtctgcttctgggaaaaactatcgttggagccattcgcc
ggacctagggacgtcgcatacgtggtcgtcgcgcccgatagcgattgtatcgtcaataga
gtcaaatcgttcttccgggaactctcttgcacgtatgagatctgtcgattaggaagacac
gcgccaatctcgaaacagttacgcgatgggatcctacgtgtcggtaaatcaactgcgcag
aaacctgcagtgaaacagtcaacggatgattggtttaagcttctgggggagaatcatata
ggtgaattgttaaggctgtacgcccaagtatgtaatcatcggttagctccgtatttgaca
caagttatacaagaccgcagtctgctagactccaacgagtcgcaaccacccaacaagcaa
cagcaacaatctactattcccgtttccgataccatgccagctacgcccgatgtactaacg
acaaaacccgagtctgtcgaagcggaaaacccgaggagcgagacaccctcctcgagcaca
acgacgagtcagactactaccaatacaagcggtaacacgacgccaacctcgcaaaccacg
agcactacgacgccgattactacgactaccggtcctgatgaagaagaaattgaacctccc
gcgattgttgtttactttgttgagcctttctcattaggtggtactgaggaccccgatcgg
cgaagactcgccattttgggtttactgaggatctattcctccgcgatcaataacatgcct
gagaatatgagatcgaatattcatgttcagataatatcactggagagtataatggaactg
ggacgagctcgcgagaggcgaaaaattcaagacgagatgagagccttggcattgaatgtt
ttcttacaaggccgtcgattgttaaatcataattccacggtgaagagtctgacgggtttc
ggtaccgccgctgctgcggatctctttctcaagagtaaagattcgtttagtaatactctt
gcaactatacatcaggaacggaacaaggcaccctaccagctctacgcaccggccttcgtg
ctagctccacttcgagcaaaaagcgaggctcccgaatcgtttggtatggcgaggcccgag
gagtgcgcggtgctctacttgagttactgcttgagcgaggatcagtcttggctactggcg
gctgcgaccgacgacaggggggaaattttcgagaccgcaactattaacatcgacataccc
aacaggaaaagaagaaagcgcgcctcggctagacgcattggtcttcaaaaacttatggac
tttatattgggcgtgatgtctcaaggtgtgcagccatggagattagttgtaggccgagta
ggacgcattgggcatggcgaattgaaaggctggagctggttactttctagaaaggctctc
ctgaaggcctcgaaacatttaaaagaaatatgcggacagtgcagtctcctgtatccctcg
gcggcaccttgcgtactcagtgcatgtttagtgtccctcgaaccggattccactttaaga
ttgatggccgatcaattcactcccgacgagagattcagtcaagcgtctgtaaactgccaa
ttatccacacctcaagatgttacgtgtacccacatacttgttttccccacttccgctacc
actcagtcatcgcagacagcgtttcaagaacaacataatgtacccgagttgggagacgat
gaattattttccgctctaaacgacgacatgccggaaggtatggaggcaatgggagatttc
aacgatatattcaatgtttggcccgagccaggcgcaggtggcggacagagtccaagcgga
agcccgcatcgcccggaaggatcaccgcacggaggggatggcggtggatcaggcctaggc
aatcacgacggtcctggtagtccctttccatgcagcaacacaccaagaacagcaatagcc
gaacaggcggaagaagttggcacgcttttgcaacaaccgctcgctcttggttatctggta
tcaactgcaccaaccggacgaatgccaccgtggttttgggcggcttgtcctcatctcgag
aacgcttgtccagttttcctgaagaacgcgttgcacttgcacagtcccgcgatacagcaa
aacagtgacgacttacttcagcaacaaagcgcacccactgctcatccgttggattcgcag
tataccactgatgtgctcaggtatgttctggaggggtacaacgcattgtcgtggctcgcg
ttggatgcgaacaccaaggatcggctgtcctgcttaccagtgcacgtacaggcactcatg
catctctaccatgcgacggcggctctcgtctga
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integrated database retrieval system
